RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 RGS5O15539 181 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 PEX1O43933 1283 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 MMRN1Q13201 1228 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 AP3B2Q13367 1082 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 IZUMO3Q5VZ72 239 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 DNAJC9Q8WXX5 260 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 ATXN7L3BQ96GX2 97 aa9.17□□□□□ -0.94
NIPBL-201ENST00000282516 RANBP17Q9H2T7 1088 aaKnown RBP9.17□□□□□ -0.94
NIPBL-201ENST00000282516 SHANK2Q9UPX8 1470 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 RRM2P31350 389 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 TRIP10Q15642 601 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 DDX53Q86TM3 631 aaKnown RBP9.16□□□□□ -0.94
NIPBL-201ENST00000282516 CDH24Q86UP0 819 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 KIFC1Q9BW19 673 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 PITPNM2Q9BZ72 1349 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 SMIM31A0A1B0GVY4 71 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 PRPF3O43395 683 aaKnown RBP9.16□□□□□ -0.94
NIPBL-201ENST00000282516 ARSEP51690 589 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 CDH6P55285 790 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 KIZQ2M2Z5 673 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 C19orf18Q8NEA5 215 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 PIGUQ9H490 435 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 IL1RAPL1Q9NZN1 696 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 CD274Q9NZQ7 290 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 MTO1Q9Y2Z2 717 aaKnown RBP9.16□□□□□ -0.94
NIPBL-201ENST00000282516 F5H423 210 aaPredicted RBP9.16□□□□□ -0.94
NIPBL-201ENST00000282516 SPAG6O75602 509 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 ALDH1A2O94788 518 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 FYNP06241 537 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 KCNK10P57789 538 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 PPP1R14AQ96A00 147 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 C20orf96Q9NUD7 363 aaPredicted RBP9.16□□□□□ -0.94
NIPBL-201ENST00000282516 C3orf70A6NLC5 250 aaPredicted RBP9.16□□□□□ -0.94
NIPBL-201ENST00000282516 SNX30Q5VWJ9 437 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 RESP18Q5W5W9 173 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 SRLQ86TD4 932 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 NLRP10Q86W26 655 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 PIGSQ96S52 555 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 BPIFA3Q9BQP9 254 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 C2orf40Q9H1Z8 148 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 DHX35Q9H5Z1 703 aaKnown RBP9.16□□□□□ -0.94
NIPBL-201ENST00000282516 NPHS2Q9NP85 383 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 HPS5Q9UPZ3 1129 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 H2AFYO75367 372 aaKnown RBP9.16□□□□□ -0.94
NIPBL-201ENST00000282516 AGTP01019 485 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 CYP19A1P11511 503 aaPredicted RBP9.16□□□□□ -0.94
NIPBL-201ENST00000282516 GNA15P30679 374 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 SOAT1P35610 550 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 CSE1LP55060 971 aaKnown RBP9.16□□□□□ -0.94
NIPBL-201ENST00000282516 NME3Q13232 169 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 ARHGAP27Q6ZUM4 889 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 RPAP1Q9BWH6 1393 aaPredicted RBP9.16□□□□□ -0.94
NIPBL-201ENST00000282516 XPO1O14980 1071 aaKnown RBP9.16□□□□□ -0.94
NIPBL-201ENST00000282516 GDF11O95390 407 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 CYBBP04839 570 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 CHRNDQ07001 517 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 KRT74Q7RTS7 529 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 NDUFS3O75489 264 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 USP1O94782 785 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 KRT6BP04259 564 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 KRT6CP48668 564 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 RPS6P62753 249 aaKnown RBP9.16□□□□□ -0.94
NIPBL-201ENST00000282516 MIGA2Q7L4E1 593 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 C11orf70Q9BRQ4 267 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 TINF2Q9BSI4 451 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 CACNA2D2Q9NY47 1150 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 TRPC5OSA6NMA1 111 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 HNRNPH2P55795 449 aaKnown RBP9.16□□□□□ -0.94
NIPBL-201ENST00000282516 ORC2Q13416 577 aaPredicted RBP9.16□□□□□ -0.94
NIPBL-201ENST00000282516 OMA1Q96E52 524 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 CYFIP2Q96F07 1278 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 RAD21L1Q9H4I0 556 aa9.16□□□□□ -0.94
NIPBL-201ENST00000282516 ABCC2Q92887 1545 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 FAM47DPA6NHR8 397 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 KLHL18O94889 574 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 COX10Q12887 443 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 KPNB1Q14974 876 aaKnown RBP9.15□□□□□ -0.94
NIPBL-201ENST00000282516 BTBD8Q5XKL5 378 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 CCDC137Q6PK04 289 aaKnown RBP9.15□□□□□ -0.94
NIPBL-201ENST00000282516 LRRC8DQ7L1W4 858 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 RASGRP4Q8TDF6 673 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 PTPRN2Q92932 1015 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 LRRC39Q96DD0 335 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 PPP1R36Q96LQ0 422 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 PARVAQ9NVD7 372 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 ZC3H4Q9UPT8 1303 aaKnown RBP9.15□□□□□ -0.94
NIPBL-201ENST00000282516 PCCAP05165 728 aaPredicted RBP9.15□□□□□ -0.94
NIPBL-201ENST00000282516 AP3M2P53677 418 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 NCAPHQ15003 741 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 LRRC24Q50LG9 513 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 ANKS6Q68DC2 871 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 PPP1R18Q6NYC8 613 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 MAP3K20Q9NYL2 800 aaKnown RBP9.15□□□□□ -0.94
NIPBL-201ENST00000282516 LEMD3Q9Y2U8 911 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 USP15Q9Y4E8 981 aaPredicted RBP9.15□□□□□ -0.94
NIPBL-201ENST00000282516 SH2B2O14492 632 aaPredicted RBP9.15□□□□□ -0.94
NIPBL-201ENST00000282516 ITGAXP20702 1163 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 CNTN1Q12860 1018 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 MOSPD2Q8NHP6 518 aa9.15□□□□□ -0.94
NIPBL-201ENST00000282516 CENPTQ96BT3 561 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.6 ms