RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 TRIM31Q9BZY9 425 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 TRIM7Q9C029 511 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 KCNG1Q9UIX4 513 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 CDR2Q01850 454 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 DDX42Q86XP3 938 aaKnown RBP eCLIP19.25■□□□□ 0.67
CAPN1-201ENST00000279247 ALG3Q92685 438 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.25■□□□□ 0.67
CAPN1-201ENST00000279247 NCANO14594 1321 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 LGALS2P05162 132 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 KRT19P08727 400 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 MCM3P25205 808 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 GTF2H1P32780 548 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 TMEM62Q0P6H9 643 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 HLTFQ14527 1009 aaKnown RBP eCLIP19.25■□□□□ 0.67
CAPN1-201ENST00000279247 PRAMEF19Q5SWL8 479 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 SPRYD7Q5W111 196 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 ISCUQ9H1K1 167 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 ERAP1Q9NZ08 941 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 VPS18Q9P253 973 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 AMACRQ9UHK6 382 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 CPA4Q9UI42 421 aa19.25■□□□□ 0.67
CAPN1-201ENST00000279247 DOCK3Q8IZD9 2030 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 ATP8B1O43520 1251 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 SPOPO43791 374 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 TOM1L1O75674 476 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 LDHAP00338 332 aaKnown RBP19.24■□□□□ 0.67
CAPN1-201ENST00000279247 COMTP21964 271 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 ARHGAP1Q07960 439 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 DCAF12L1Q5VU92 463 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 SLFN11Q7Z7L1 901 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 ZNF564Q8TBZ8 553 aaPredicted RBP19.24■□□□□ 0.67
CAPN1-201ENST00000279247 TCP11Q8WWU5 503 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 ACO2Q99798 780 aaKnown RBP19.24■□□□□ 0.67
CAPN1-201ENST00000279247 CELF4Q9BZC1 486 aaKnown RBP19.24■□□□□ 0.67
CAPN1-201ENST00000279247 STYXL1Q9Y6J8 313 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 TUBBP07437 444 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 IQCF3P0C7M6 154 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 GTF2A2P52657 109 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 IRX5P78411 483 aaPredicted RBP19.24■□□□□ 0.67
CAPN1-201ENST00000279247 MXD4Q14582 209 aaPredicted RBP19.24■□□□□ 0.67
CAPN1-201ENST00000279247 C15orf39Q6ZRI6 1047 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 PLPPR4Q7Z2D5 763 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 HES6Q96HZ4 224 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 CPB2Q96IY4 423 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 PBKQ96KB5 322 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 ZIC5Q96T25 663 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 TMEM134Q9H6X4 195 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 CNOT8Q9UFF9 292 aaKnown RBP19.24■□□□□ 0.67
CAPN1-201ENST00000279247 STXBP5LQ9Y2K9 1186 aa19.24■□□□□ 0.67
CAPN1-201ENST00000279247 CNTNAP2Q9UHC6 1331 aa19.23■□□□□ 0.67
CAPN1-201ENST00000279247 A0A087WZ62 844 aa19.23■□□□□ 0.67
CAPN1-201ENST00000279247 LGR5O75473 907 aa19.23■□□□□ 0.67
CAPN1-201ENST00000279247 EFNA5P52803 228 aa19.23■□□□□ 0.67
CAPN1-201ENST00000279247 TNNC1P63316 161 aa19.23■□□□□ 0.67
CAPN1-201ENST00000279247 HSP90B2PQ58FF3 399 aa19.23■□□□□ 0.67
CAPN1-201ENST00000279247 CYFIP2Q96F07 1278 aa19.23■□□□□ 0.67
CAPN1-201ENST00000279247 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.23■□□□□ 0.672e-7■■■□□ 16.5
CAPN1-201ENST00000279247 FDXACB1Q9BRP7 624 aaPredicted RBP19.23■□□□□ 0.67
CAPN1-201ENST00000279247 MAF1Q9H063 256 aa19.23■□□□□ 0.67
CAPN1-201ENST00000279247 RNF14Q9UBS8 474 aa19.23■□□□□ 0.67
CAPN1-201ENST00000279247 PMM2O15305 246 aa19.23■□□□□ 0.67
CAPN1-201ENST00000279247 HBP1O60381 514 aa19.23■□□□□ 0.67
CAPN1-201ENST00000279247 MYL6P60660 151 aa19.23■□□□□ 0.67
CAPN1-201ENST00000279247 TAPT1Q6NXT6 567 aa19.23■□□□□ 0.67
CAPN1-201ENST00000279247 ZNF771Q7L3S4 317 aaPredicted RBP19.23■□□□□ 0.67
CAPN1-201ENST00000279247 ZNF572Q7Z3I7 529 aaPredicted RBP19.23■□□□□ 0.67
CAPN1-201ENST00000279247 RHOT2Q8IXI1 618 aa19.23■□□□□ 0.67
CAPN1-201ENST00000279247 LENG1Q96BZ8 264 aaPredicted RBP19.23■□□□□ 0.67
CAPN1-201ENST00000279247 RNPC3Q96LT9 517 aaKnown RBP19.23■□□□□ 0.67
CAPN1-201ENST00000279247 CGRRF1Q99675 332 aa19.23■□□□□ 0.67
CAPN1-201ENST00000279247 IMPG2Q9BZV3 1241 aa19.23■□□□□ 0.67
CAPN1-201ENST00000279247 NXF1Q9UBU9 619 aaKnown RBP19.23■□□□□ 0.67
CAPN1-201ENST00000279247 ADGRA2Q96PE1 1338 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 SART1O43290 800 aaKnown RBP19.22■□□□□ 0.67
CAPN1-201ENST00000279247 WEE2P0C1S8 567 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 FGFR4P22455 802 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 GCNT1Q02742 428 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 GPS2Q13227 327 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 CUL2Q13617 745 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 ATF7IP2Q5U623 682 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 GPR142Q7Z601 462 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 DDX1Q92499 740 aaKnown RBP19.22■□□□□ 0.67
CAPN1-201ENST00000279247 GJB6O95452 261 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 FAM153BP0C7A2 387 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 CXCL8P10145 99 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 FAM153CQ494X1 144 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 PAXIP1Q6ZW49 1069 aaPredicted RBP19.22■□□□□ 0.67
CAPN1-201ENST00000279247 VTI1AQ96AJ9 217 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 C11orf70Q9BRQ4 267 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 FAM153AQ9UHL3 310 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 FAN1Q9Y2M0 1017 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 THAP12O43422 761 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 PIGRP01833 764 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 ITIH3Q06033 890 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 ZNF792Q3KQV3 632 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 CHADLQ6NUI6 762 aa19.22■□□□□ 0.67
CAPN1-201ENST00000279247 DDX3YO15523 660 aaKnown RBP19.21■□□□□ 0.67
CAPN1-201ENST00000279247 GH1P01241 217 aa19.21■□□□□ 0.67
CAPN1-201ENST00000279247 TMEM191BP0C7N4 346 aa19.21■□□□□ 0.67
CAPN1-201ENST00000279247 GNA15P30679 374 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms