RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 MYH4Q9Y623 1939 aa12.65□□□□□ -0.38
SLC13A3-201ENST00000279027 RARAP10276 462 aa12.65□□□□□ -0.38
SLC13A3-201ENST00000279027 RALAP11233 206 aa12.65□□□□□ -0.38
SLC13A3-201ENST00000279027 BPIFB4P59827 614 aa12.65□□□□□ -0.38
SLC13A3-201ENST00000279027 FMO1Q01740 532 aa12.65□□□□□ -0.38
SLC13A3-201ENST00000279027 FSTL1Q12841 308 aa12.65□□□□□ -0.38
SLC13A3-201ENST00000279027 SMTNL2Q2TAL5 461 aa12.65□□□□□ -0.38
SLC13A3-201ENST00000279027 FAM160B1Q5W0V3 765 aa12.65□□□□□ -0.38
SLC13A3-201ENST00000279027 SESTD1Q86VW0 696 aa12.65□□□□□ -0.38
SLC13A3-201ENST00000279027 DDNO94850 711 aaPredicted RBP12.65□□□□□ -0.39
SLC13A3-201ENST00000279027 RPL21P46778 160 aaKnown RBP12.65□□□□□ -0.39
SLC13A3-201ENST00000279027 ZNF568Q3ZCX4 644 aa12.65□□□□□ -0.39
SLC13A3-201ENST00000279027 ATP13A4Q4VNC1 1196 aa12.65□□□□□ -0.39
SLC13A3-201ENST00000279027 ASAP3Q8TDY4 903 aa12.65□□□□□ -0.39
SLC13A3-201ENST00000279027 ZNF473Q8WTR7 871 aaKnown RBP12.65□□□□□ -0.39
SLC13A3-201ENST00000279027 PRPF31Q8WWY3 499 aaKnown RBP12.65□□□□□ -0.39
SLC13A3-201ENST00000279027 HES6Q96HZ4 224 aa12.65□□□□□ -0.39
SLC13A3-201ENST00000279027 CAMKK2Q96RR4 588 aa12.65□□□□□ -0.39
SLC13A3-201ENST00000279027 MTMR12Q9C0I1 747 aa12.65□□□□□ -0.39
SLC13A3-201ENST00000279027 TNNC2P02585 160 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 DSG3P32926 999 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 TCF7P36402 384 aaPredicted RBP12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 GRM1Q13255 1194 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 ACAD10Q6JQN1 1059 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 FOXR2Q6PJQ5 311 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 GPRASP2Q96D09 838 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 CALN1Q9BXU9 219 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 PARP2Q9UGN5 583 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 A0A0A6YYK5 440 aaPredicted RBP12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 FOXO6A8MYZ6 492 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 TBC1D12O60347 775 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 RFX1P22670 979 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 GBP2P32456 591 aaPredicted RBP12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 GTF2H1P32780 548 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 COILP38432 576 aaPredicted RBP12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 TMED2Q15363 201 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 MAPK6Q16659 721 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 GKAP1Q5VSY0 366 aaPredicted RBP12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 PNMA8AQ86V59 439 aaPredicted RBP12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 IQCKQ8N0W5 287 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 MPHOSPH6Q99547 160 aaKnown RBP12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 CHST7Q9NS84 486 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 H0YCG3 227 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 OATP04181 439 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 SUPT20HL2P0C7V6 817 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 KIF22Q14807 665 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 FAM133BQ5BKY9 247 aaKnown RBP12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 CCDC13Q8IYE1 715 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 SPATA33Q96N06 139 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 TMBIM4Q9HC24 238 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 GTF3C4Q9UKN8 822 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 MYH11P35749 1972 aa12.64□□□□□ -0.39
SLC13A3-201ENST00000279027 GMNCA6NCL1 334 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 ADM5C9JUS6 153 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 ANXA13P27216 316 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 HSPA9P38646 679 aaKnown RBP12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 CLCN3P51790 818 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 IFI35P80217 286 aaPredicted RBP12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 TMEM62Q0P6H9 643 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 SMAD1Q15797 465 aaKnown RBP12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 WDR72Q3MJ13 1102 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 DCAF12L1Q5VU92 463 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 FKBP1CQ5VVH2 108 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 TMC3Q7Z5M5 1100 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 ERICH1Q86X53 443 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 MAP4K3Q8IVH8 894 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 PRELID2Q8N945 189 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 C1orf131Q8NDD1 294 aaKnown RBP12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 MCEEQ96PE7 176 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 FAM49AQ9H0Q0 323 aaPredicted RBP12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 C10orf88Q9H8K7 445 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 CYP39A1Q9NYL5 469 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 SLX4Q8IY92 1834 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 PFASO15067 1338 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 ADGRA3Q8IWK6 1321 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 PODXLO00592 558 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 DDX3YO15523 660 aaKnown RBP12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 PTENP60484 403 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 ZNF699Q32M78 642 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 GJC2Q5T442 439 aaPredicted RBP12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 SRRM1Q8IYB3 904 aaKnown RBP12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 ANKS4BQ8N8V4 417 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 OR5B17Q8NGF7 314 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 PSPC1Q8WXF1 523 aaKnown RBP12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 COPS5Q92905 334 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 VTI1AQ96AJ9 217 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 BORCS6Q96GS4 357 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 DDX23Q9BUQ8 820 aaKnown RBP12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 NKIRAS1Q9NYS0 192 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 SYNJ2BP-COX16A0A087WUM0 186 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 EXTL3O43909 919 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 STAM2O75886 525 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 MAP3K6O95382 1288 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 CHN1P15882 459 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 MUTP22033 750 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 STX2P32856 288 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 TNFSF9P41273 254 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 PSMC4P43686 418 aa12.63□□□□□ -0.39
SLC13A3-201ENST00000279027 RAP1GAPP47736 663 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms