RNA–Protein interactions for RNA: ENST00000278412.6

SSRP1-201, Transcript of structure specific recognition protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSRP1, Length 2,819 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-201ENST00000278412 KCNJ6P48051 423 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 MYL6P60660 151 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 JADE1Q6IE81 842 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 SCARA5Q6ZMJ2 495 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 KLHDC9Q8NEP7 349 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 PRMT7Q9NVM4 692 aaPredicted RBP12.65□□□□□ -0.38
SSRP1-201ENST00000278412 SNTG2Q9NY99 539 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 AIPL1Q9NZN9 384 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 Q9Y3F1 56 aa12.65□□□□□ -0.38
SSRP1-201ENST00000278412 NOC2LQ9Y3T9 749 aaKnown RBP12.65□□□□□ -0.38
SSRP1-201ENST00000278412 CITO14578 2027 aa12.65□□□□□ -0.39
SSRP1-201ENST00000278412 SCN1AP35498 2009 aa12.65□□□□□ -0.39
SSRP1-201ENST00000278412 SMIM35A0A1B0GVV1 85 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 DDX3XO00571 662 aaKnown RBP eCLIP12.64□□□□□ -0.399e-13■■■■■ 33.9
SSRP1-201ENST00000278412 PPEF2O14830 753 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 MAPK13O15264 365 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 ASAP2O43150 1006 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 ZEB2O60315 1214 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 CHRNA1P02708 482 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 SOX5P35711 763 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 CLDN10P78369 228 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 ZMAT2Q96NC0 199 aaKnown RBP12.64□□□□□ -0.39
SSRP1-201ENST00000278412 UNC93B1Q9H1C4 597 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 TRPV6Q9H1D0 765 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 A0A1B0GUA9 196 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 ENC1O14682 589 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 EIF4BP23588 611 aaKnown RBP12.64□□□□□ -0.39
SSRP1-201ENST00000278412 RAP1GAPP47736 663 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 IRF5Q13568 498 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 C2CD6Q53TS8 623 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 KCNN1Q92952 543 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 CGRRF1Q99675 332 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 CFHR5Q9BXR6 569 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 AGO3Q9H9G7 860 aaKnown RBP12.64□□□□□ -0.39
SSRP1-201ENST00000278412 KCND1Q9NSA2 647 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 POLIQ9UNA4 740 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 PIN4Q9Y237 131 aaKnown RBP12.64□□□□□ -0.39
SSRP1-201ENST00000278412 COQ4Q9Y3A0 265 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 PCDHA13Q9Y5I0 950 aa12.64□□□□□ -0.39
SSRP1-201ENST00000278412 BUB1O43683 1085 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 SERPING1P05155 500 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 GRK4P32298 578 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 KCTD19Q17RG1 926 aaPredicted RBP12.63□□□□□ -0.39
SSRP1-201ENST00000278412 SLC9C1Q4G0N8 1177 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 ZNF569Q5MCW4 686 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 TRAPPC11Q7Z392 1133 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 IFNLR1Q8IU57 520 aaPredicted RBP12.63□□□□□ -0.39
SSRP1-201ENST00000278412 SLC35F6Q8N357 371 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 ARRDC4Q8NCT1 418 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 RABGGTAQ92696 567 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 NFKBIZQ9BYH8 718 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 STK33Q9BYT3 514 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 IFIH1Q9BYX4 1025 aaKnown RBP12.63□□□□□ -0.39
SSRP1-201ENST00000278412 TMEM51Q9NW97 253 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 SIX4Q9UIU6 781 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 CDY2AQ9Y6F7 541 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 CAPN6Q9Y6Q1 641 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 ACLYP53396 1101 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 NFX1Q12986 1120 aaKnown RBP12.63□□□□□ -0.39
SSRP1-201ENST00000278412 ZNF394Q53GI3 561 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 CCDC122Q5T0U0 273 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 KIAA1328Q86T90 577 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 NOP9Q86U38 636 aaKnown RBP12.63□□□□□ -0.39
SSRP1-201ENST00000278412 FAM228AQ86W67 206 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 EXOC8Q8IYI6 725 aa12.63□□□□□ -0.39
SSRP1-201ENST00000278412 C18orf25Q96B23 403 aaPredicted RBP12.63□□□□□ -0.39
SSRP1-201ENST00000278412 SEPT11Q9NVA2 429 aaKnown RBP12.63□□□□□ -0.39
SSRP1-201ENST00000278412 TET1Q8NFU7 2136 aa12.62□□□□□ -0.39
SSRP1-201ENST00000278412 EIF3CLB5ME19 914 aaKnown RBP12.62□□□□□ -0.39
SSRP1-201ENST00000278412 RIOK3O14730 519 aaKnown RBP12.62□□□□□ -0.39
SSRP1-201ENST00000278412 ZSCAN12O43309 604 aa12.62□□□□□ -0.39
SSRP1-201ENST00000278412 KRT19P08727 400 aa12.62□□□□□ -0.39
SSRP1-201ENST00000278412 WEE2P0C1S8 567 aa12.62□□□□□ -0.39
SSRP1-201ENST00000278412 CD58P19256 250 aa12.62□□□□□ -0.39
SSRP1-201ENST00000278412 NCOA4Q13772 614 aa12.62□□□□□ -0.39
SSRP1-201ENST00000278412 LLGL2Q6P1M3 1020 aa12.62□□□□□ -0.39
SSRP1-201ENST00000278412 PHLDB2Q86SQ0 1253 aa12.62□□□□□ -0.39
SSRP1-201ENST00000278412 PCDHB18PQ96TA0 734 aa12.62□□□□□ -0.39
SSRP1-201ENST00000278412 EIF3CQ99613 913 aaKnown RBP12.62□□□□□ -0.39
SSRP1-201ENST00000278412 GCOM2Q9BZD3 368 aaPredicted RBP12.62□□□□□ -0.39
SSRP1-201ENST00000278412 GOLGA2P5Q9HBQ8 144 aa12.62□□□□□ -0.39
SSRP1-201ENST00000278412 PHACTR2O75167 634 aa12.62□□□□□ -0.39
SSRP1-201ENST00000278412 MOCS3O95396 460 aa12.62□□□□□ -0.39
SSRP1-201ENST00000278412 THPOP40225 353 aa12.62□□□□□ -0.39
SSRP1-201ENST00000278412 ETF1P62495 437 aaKnown RBP12.62□□□□□ -0.39
SSRP1-201ENST00000278412 CDK17Q00537 523 aa12.62□□□□□ -0.39
SSRP1-201ENST00000278412 PTGISQ16647 500 aa12.62□□□□□ -0.39
SSRP1-201ENST00000278412 FAM187BQ17R55 369 aa12.62□□□□□ -0.39
SSRP1-201ENST00000278412 ARHGAP29Q52LW3 1261 aa12.62□□□□□ -0.39
SSRP1-201ENST00000278412 C1orf127Q8N9H9 656 aa12.62□□□□□ -0.39
SSRP1-201ENST00000278412 U2AF1L4Q8WU68 220 aaKnown RBP12.62□□□□□ -0.39
SSRP1-201ENST00000278412 JAKMIP2Q96AA8 810 aa12.62□□□□□ -0.39
SSRP1-201ENST00000278412 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.62□□□□□ -0.39
SSRP1-201ENST00000278412 V9GYY5 206 aaPredicted RBP12.62□□□□□ -0.39
SSRP1-201ENST00000278412 KRT5P13647 590 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 CHRNB2P17787 502 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 STAT1P42224 750 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 CDH8P55286 799 aa12.61□□□□□ -0.39
SSRP1-201ENST00000278412 MCCD1P59942 119 aaPredicted RBP12.61□□□□□ -0.39
SSRP1-201ENST00000278412 NOP14P78316 857 aaKnown RBP12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms