RNA–Protein interactions for RNA: ENST00000276573.11

TRIM55-201, Transcript of tripartite motif containing 55, humanhuman

TSL 1 (best) BASIC

Gene TRIM55, Length 1,960 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55-201ENST00000276573 ATF7IP2Q5U623 682 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 ACAD10Q6JQN1 1059 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 MPZL3Q6UWV2 235 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 WDR49Q8IV35 697 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 HES6Q96HZ4 224 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 NFKBIZQ9BYH8 718 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 MINDY3Q9H8M7 445 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 APOBEC3GQ9HC16 384 aaKnown RBP10.3□□□□□ -0.76
TRIM55-201ENST00000276573 RBM12Q9NTZ6 932 aaKnown RBP10.3□□□□□ -0.76
TRIM55-201ENST00000276573 COG5Q9UP83 839 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 FAM170AA1A519 330 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 H3BRB1 525 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 INO80B-WBP1J3KQ70 363 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 MAP2K7O14733 419 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 SASH3O75995 380 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 CST3P01034 146 aaPredicted RBP10.3□□□□□ -0.76
TRIM55-201ENST00000276573 PLA2G4AP47712 749 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 HUNKP57058 714 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 CUL2Q13617 745 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 NCOA4Q13772 614 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 GLE1Q53GS7 698 aaKnown RBP10.3□□□□□ -0.76
TRIM55-201ENST00000276573 SPOPLQ6IQ16 392 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 CCNI2Q6ZMN8 369 aaPredicted RBP10.3□□□□□ -0.76
TRIM55-201ENST00000276573 IFNLR1Q8IU57 520 aaPredicted RBP10.3□□□□□ -0.76
TRIM55-201ENST00000276573 KRT222Q8N1A0 295 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 MSL3Q8N5Y2 521 aaKnown RBP10.3□□□□□ -0.76
TRIM55-201ENST00000276573 USP38Q8NB14 1042 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 INO80BQ9C086 356 aaPredicted RBP10.3□□□□□ -0.76
TRIM55-201ENST00000276573 TUT1Q9H6E5 874 aaKnown RBP10.3□□□□□ -0.76
TRIM55-201ENST00000276573 IFT122Q9HBG6 1241 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 SLC5A4Q9NY91 659 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 CPA4Q9UI42 421 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 TNFSF13BQ9Y275 285 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 PCDHB2Q9Y5E7 798 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 COL1A2P08123 1366 aa10.3□□□□□ -0.76
TRIM55-201ENST00000276573 B4GALT5O43286 388 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 CEP104O60308 925 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 ZMYND10O75800 440 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 MTA2O94776 668 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 CALCAP01258 141 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 CYP1A2P05177 515 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 IQCF3P0C7M6 154 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 ZNF286BP0CG31 522 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 HOXD8P13378 290 aaPredicted RBP10.29□□□□□ -0.76
TRIM55-201ENST00000276573 PHKA2P46019 1235 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 RNASE9P60153 205 aaKnown RBP10.29□□□□□ -0.76
TRIM55-201ENST00000276573 PTPROQ16827 1216 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 FAM187BQ17R55 369 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 DUOXA2Q1HG44 320 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 CLEC16AQ2KHT3 1053 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 EEF1DP3Q658K8 133 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 SCARA3Q6AZY7 606 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 MTHFD1LQ6UB35 978 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 HDXQ7Z353 690 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 ZNF677Q86XU0 584 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 RASGEF1CQ8N431 466 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 OR6J1Q8NGC5 347 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 ACTRT1Q8TDG2 376 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 FAM212AQ96EL1 285 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 PRMT7Q9NVM4 692 aaPredicted RBP10.29□□□□□ -0.76
TRIM55-201ENST00000276573 CTTNBP2NLQ9P2B4 639 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 DMGDHQ9UI17 866 aaKnown RBP10.29□□□□□ -0.76
TRIM55-201ENST00000276573 TMEM59LQ9UK28 342 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 CNTN6Q9UQ52 1028 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 NUB1Q9Y5A7 615 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 ALG6Q9Y672 507 aa10.29□□□□□ -0.76
TRIM55-201ENST00000276573 A0A087WZ62 844 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 DDX3YO15523 660 aaKnown RBP10.28□□□□□ -0.76
TRIM55-201ENST00000276573 MMP3P08254 477 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 CLTAP09496 248 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 TBXAS1P24557 533 aaPredicted RBP10.28□□□□□ -0.76
TRIM55-201ENST00000276573 TMOD1P28289 359 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 MORN1Q5T089 497 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 THNSL1Q8IYQ7 743 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 HDAC7Q8WUI4 952 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 RUBCNQ92622 972 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 FDXACB1Q9BRP7 624 aaPredicted RBP10.28□□□□□ -0.76
TRIM55-201ENST00000276573 ZHX1Q9UKY1 873 aaPredicted RBP10.28□□□□□ -0.76
TRIM55-201ENST00000276573 PCDHB4Q9Y5E5 795 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 MANSC4A6NHS7 340 aaPredicted RBP10.28□□□□□ -0.76
TRIM55-201ENST00000276573 B4GALT4O60513 344 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 ASS1P00966 412 aaKnown RBP10.28□□□□□ -0.76
TRIM55-201ENST00000276573 HOXC6P09630 235 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 UNGP13051 313 aaPredicted RBP10.28□□□□□ -0.76
TRIM55-201ENST00000276573 ZNF157P51786 506 aaPredicted RBP10.28□□□□□ -0.76
TRIM55-201ENST00000276573 NOP14P78316 857 aaKnown RBP10.28□□□□□ -0.76
TRIM55-201ENST00000276573 TNFAIP2Q03169 654 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 MAP2K5Q13163 448 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 DGKDQ16760 1214 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 TMEM132AQ24JP5 1023 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 SGSM1Q2NKQ1 1148 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 ZNF568Q3ZCX4 644 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 MAP9Q49MG5 647 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 CDR2LQ86X02 465 aaPredicted RBP10.28□□□□□ -0.76
TRIM55-201ENST00000276573 RASAL3Q86YV0 1011 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 UBE2Q2Q8WVN8 375 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.28□□□□□ -0.76
TRIM55-201ENST00000276573 CDT1Q9H211 546 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 NMRK2Q9NPI5 230 aa10.28□□□□□ -0.76
TRIM55-201ENST00000276573 GTF3C4Q9UKN8 822 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms