RNA–Protein interactions for RNA: ENST00000274938.7

SCUBE3-201, Transcript of signal peptide, CUB domain and EGF like domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCUBE3, Length 7,356 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE3-201ENST00000274938 TMEM179Q6ZVK1 233 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 CALML6Q8TD86 181 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 GANCQ8TET4 914 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 CLMNQ96JQ2 1002 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 AGBL1Q96MI9 1066 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 AIFM3Q96NN9 605 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 SH3GL1Q99961 368 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 BBS2Q9BXC9 721 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 DHX35Q9H5Z1 703 aaKnown RBP9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 ZSCAN32Q9NX65 697 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 FBXO40Q9UH90 709 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 GRID1Q9ULK0 1009 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 A0A1B0GTH6 734 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 C3orf70A6NLC5 250 aaPredicted RBP9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 MYO1GB0I1T2 1018 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 TRIM66O15016 1216 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 PLEKHA8P1O95397 391 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 HIST1H2AGP0C0S8 130 aaPredicted RBP9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 HIST1H2ADP20671 130 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 COPB2P35606 906 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 VCPP55072 806 aaKnown RBP9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 KCNK10P57789 538 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 PKN3Q6P5Z2 889 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 CYFIP1Q7L576 1253 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 PID1Q7Z2X4 250 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 MFN1Q8IWA4 741 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 GPD1LQ8N335 351 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 HIST1H2AHQ96KK5 128 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 HIST1H2AJQ99878 128 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 H2AFJQ9BTM1 129 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 TIPINQ9BVW5 301 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 ISCUQ9H1K1 167 aa9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 ZC3H7BQ9UGR2 993 aaKnown RBP9.15□□□□□ -0.94
SCUBE3-201ENST00000274938 KANSL1LA0AUZ9 987 aa9.15□□□□□ -0.95
SCUBE3-201ENST00000274938 BNIP3LO60238 219 aa9.15□□□□□ -0.95
SCUBE3-201ENST00000274938 CDK8P49336 464 aa9.15□□□□□ -0.95
SCUBE3-201ENST00000274938 ST13P50502 369 aaKnown RBP9.15□□□□□ -0.95
SCUBE3-201ENST00000274938 KDM7AQ6ZMT4 941 aa9.15□□□□□ -0.95
SCUBE3-201ENST00000274938 COL23A1Q86Y22 540 aaPredicted RBP9.15□□□□□ -0.95
SCUBE3-201ENST00000274938 ARHGEF26Q96DR7 871 aa9.15□□□□□ -0.95
SCUBE3-201ENST00000274938 PLEKHF1Q96S99 279 aa9.15□□□□□ -0.95
SCUBE3-201ENST00000274938 FAM213AQ9BRX8 229 aa9.15□□□□□ -0.95
SCUBE3-201ENST00000274938 EPC1Q9H2F5 836 aa9.15□□□□□ -0.95
SCUBE3-201ENST00000274938 GEMIN8Q9NWZ8 242 aaKnown RBP9.15□□□□□ -0.95
SCUBE3-201ENST00000274938 FARP1Q9Y4F1 1045 aaPredicted RBP9.15□□□□□ -0.95
SCUBE3-201ENST00000274938 IQCA1LA6NCM1 817 aa9.15□□□□□ -0.95
SCUBE3-201ENST00000274938 P4HBP07237 508 aaKnown RBP9.15□□□□□ -0.95
SCUBE3-201ENST00000274938 ZNF394Q53GI3 561 aa9.15□□□□□ -0.95
SCUBE3-201ENST00000274938 SLC27A3Q5K4L6 730 aa9.15□□□□□ -0.95
SCUBE3-201ENST00000274938 TTC39BQ5VTQ0 682 aaPredicted RBP9.15□□□□□ -0.95
SCUBE3-201ENST00000274938 NUP93Q8N1F7 819 aa9.15□□□□□ -0.95
SCUBE3-201ENST00000274938 ST13P5Q8NFI4 369 aaPredicted RBP9.15□□□□□ -0.95
SCUBE3-201ENST00000274938 TMEM191CA6NGB0 347 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 PRPF4O43172 522 aaKnown RBP eCLIP9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 GDF11O95390 407 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 GNAT1P11488 350 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 HSD17B4P51659 736 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 STX5Q13190 355 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 ZNF235Q14590 738 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 LRRC36Q1X8D7 754 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 ZNF568Q3ZCX4 644 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 C6orf10Q5SRN2 563 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 FAM102AQ5T9C2 384 aaPredicted RBP9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 GALNT4Q8N4A0 578 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 NLRP4Q96MN2 994 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 ITGB1BP2Q9UKP3 347 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 ADGRA3Q8IWK6 1321 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 NAA30Q147X3 362 aaPredicted RBP9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 CYB5D1Q6P9G0 228 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 NDEL1Q9GZM8 345 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 RHBDL2Q9NX52 303 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 UTP6Q9NYH9 597 aaKnown RBP9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 TUBGCP4Q9UGJ1 667 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 NEU2Q9Y3R4 380 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 TNPO2O14787 897 aaKnown RBP9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 H2AFYO75367 372 aaKnown RBP9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 FKBP9O95302 570 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 NUP62P37198 522 aaPredicted RBP9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 COPAP53621 1224 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 PLOD1Q02809 727 aaPredicted RBP9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 PTK7Q13308 1070 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 TRIP4Q15650 581 aaPredicted RBP9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 ARMCX4Q5H9R4 360 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 DPY19L2Q6NUT2 758 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 FKBP9P1Q75LS8 142 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 SUGP1Q8IWZ8 645 aaKnown RBP9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 NLGN1Q8N2Q7 840 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 SH2D3CQ8N5H7 860 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 OLFM1Q99784 485 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 DDX50Q9BQ39 737 aaKnown RBP9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 MANSC1Q9H8J5 431 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 MAST1Q9Y2H9 1570 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 ABCB11O95342 1321 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 TMEM120BA0PK00 339 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 O00370 1275 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 GUCA1CO95843 209 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 PRR29P0C7W0 189 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 PPP4R4Q6NUP7 873 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 RNF135Q8IUD6 432 aa9.14□□□□□ -0.95
SCUBE3-201ENST00000274938 ANKMY2Q8IV38 441 aa9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms