RNA–Protein interactions for RNA: ENST00000272638.13

UBXN4-201, Transcript of UBX domain protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBXN4, Length 4,006 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-201ENST00000272638 HIBCHQ6NVY1 386 aaPredicted RBP13.36□□□□□ -0.27
UBXN4-201ENST00000272638 SLC13A5Q86YT5 568 aaPredicted RBP13.36□□□□□ -0.27
UBXN4-201ENST00000272638 EFCAB13Q8IY85 973 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 CCDC197Q8NCU1 140 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 ACTRT1Q8TDG2 376 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 EPS8L1Q8TE68 723 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 PSPC1Q8WXF1 523 aaKnown RBP13.36□□□□□ -0.27
UBXN4-201ENST00000272638 SPATA33Q96N06 139 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 MTMR12Q9C0I1 747 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 WNT8AQ9H1J5 351 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 A1CFQ9NQ94 594 aaKnown RBP13.36□□□□□ -0.27
UBXN4-201ENST00000272638 A6NNZ2 444 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 GOLGA8RI6L899 631 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 PIK3CDO00329 1044 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 RNF8O76064 485 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 SHBGP04278 402 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 GJB1P08034 283 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 MAGEA9P43362 315 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 YWHAGP61981 247 aaKnown RBP eCLIP13.36□□□□□ -0.27
UBXN4-201ENST00000272638 ATP11AP98196 1134 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 ACTN3Q08043 901 aaPredicted RBP13.36□□□□□ -0.27
UBXN4-201ENST00000272638 TUBB8Q3ZCM7 444 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 TBC1D1Q86TI0 1168 aaPredicted RBP13.36□□□□□ -0.27
UBXN4-201ENST00000272638 C1orf131Q8NDD1 294 aaKnown RBP13.36□□□□□ -0.27
UBXN4-201ENST00000272638 PCDHB18PQ96TA0 734 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 SLC38A10Q9HBR0 1119 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 UBR2Q8IWV8 1755 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 PLIN4Q96Q06 1357 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 FOXO6A8MYZ6 492 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 CLCN3P51790 818 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 LY6KQ17RY6 165 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 ATP13A4Q4VNC1 1196 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 ZC3H18Q86VM9 953 aaKnown RBP13.36□□□□□ -0.27
UBXN4-201ENST00000272638 GRK7Q8WTQ7 553 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 COG5Q9UP83 839 aa13.36□□□□□ -0.27
UBXN4-201ENST00000272638 IFI35P80217 286 aaPredicted RBP13.35□□□□□ -0.27
UBXN4-201ENST00000272638 KRT81Q14533 505 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 IZUMO3Q5VZ72 239 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 MOB2Q70IA6 237 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 BSNDQ8WZ55 320 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 FAM149B1Q96BN6 582 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 ANKRD36BP1Q96IX9 119 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 SIX2Q9NPC8 291 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 HEY1Q9Y5J3 304 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 BRAFP15056 766 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 RGS7P49802 495 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 CDR2Q01850 454 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 IFRD2Q12894 506 aaPredicted RBP13.35□□□□□ -0.27
UBXN4-201ENST00000272638 SCYL3Q8IZE3 742 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 SLC17A8Q8NDX2 589 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 CALR3Q96L12 384 aaKnown RBP13.35□□□□□ -0.27
UBXN4-201ENST00000272638 KLF6Q99612 283 aaPredicted RBP13.35□□□□□ -0.27
UBXN4-201ENST00000272638 GDF3Q9NR23 364 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 TELO2Q9Y4R8 837 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 MAD1L1Q9Y6D9 718 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 DCDC2CA8MYV0 355 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 RARAP10276 462 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 HSPA6P17066 643 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 COILP38432 576 aaPredicted RBP13.35□□□□□ -0.27
UBXN4-201ENST00000272638 PRKCIP41743 596 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 PSMC4P43686 418 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 IRX4P78413 519 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 ZNF844Q08AG5 666 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 FAM83AQ86UY5 434 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 KCTD6Q8NC69 237 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 PRPF31Q8WWY3 499 aaKnown RBP13.35□□□□□ -0.27
UBXN4-201ENST00000272638 RUNDC3BQ96NL0 473 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 DDX23Q9BUQ8 820 aaKnown RBP13.35□□□□□ -0.27
UBXN4-201ENST00000272638 EPN3Q9H201 632 aa13.35□□□□□ -0.27
UBXN4-201ENST00000272638 GTPBP10A4D1E9 387 aaKnown RBP13.34□□□□□ -0.27
UBXN4-201ENST00000272638 NEBLO76041 1014 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 TCF7P36402 384 aaPredicted RBP13.34□□□□□ -0.27
UBXN4-201ENST00000272638 RPL21P46778 160 aaKnown RBP13.34□□□□□ -0.27
UBXN4-201ENST00000272638 AARSP49588 968 aaKnown RBP eCLIP13.34□□□□□ -0.27
UBXN4-201ENST00000272638 ZNF131P52739 623 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 PSMC1P62191 440 aaKnown RBP13.34□□□□□ -0.27
UBXN4-201ENST00000272638 CYP24A1Q07973 514 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 SLMAPQ14BN4 828 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 EPM2AIP1Q7L775 607 aaPredicted RBP13.34□□□□□ -0.27
UBXN4-201ENST00000272638 DPP9Q86TI2 863 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 C4orf19Q8IY42 314 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 MAIP1Q8WWC4 291 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 VTI1AQ96AJ9 217 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 KREMEN1Q96MU8 473 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 RPF1Q9H9Y2 349 aaKnown RBP13.34□□□□□ -0.27
UBXN4-201ENST00000272638 CHST7Q9NS84 486 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 KLRG2A4D1S0 409 aaPredicted RBP13.34□□□□□ -0.27
UBXN4-201ENST00000272638 RASA4BC9J798 803 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 RASA4O43374 803 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 RAP1GAPP47736 663 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 ITGA8P53708 1063 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 PTGISQ16647 500 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 ZNF667Q5HYK9 610 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 EMC1Q8N766 993 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 KIAA1683Q9H0B3 1180 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 CA4P22748 312 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 ERFP50548 548 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 GJC2Q5T442 439 aaPredicted RBP13.34□□□□□ -0.27
UBXN4-201ENST00000272638 SLFN12LQ6IEE8 588 aa13.34□□□□□ -0.27
UBXN4-201ENST00000272638 ZBED8Q8IZ13 594 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms