RNA–Protein interactions for RNA: ENST00000270722.9

PRDM16-201, Transcript of PR/SET domain 16, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRDM16, Length 8,690 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-201ENST00000270722 RMDN1Q96DB5 314 aa13.93□□□□□ -0.18
PRDM16-201ENST00000270722 ZNF302Q9NR11 478 aa13.93□□□□□ -0.18
PRDM16-201ENST00000270722 RABGEF1Q9UJ41 708 aa13.93□□□□□ -0.18
PRDM16-201ENST00000270722 ATP7AQ04656 1500 aa13.93□□□□□ -0.18
PRDM16-201ENST00000270722 KDM5DQ9BY66 1539 aa13.93□□□□□ -0.18
PRDM16-201ENST00000270722 ATP1A1P05023 1023 aaKnown RBP13.93□□□□□ -0.18
PRDM16-201ENST00000270722 IL13P35225 146 aa13.93□□□□□ -0.18
PRDM16-201ENST00000270722 HADHAP40939 763 aa13.93□□□□□ -0.18
PRDM16-201ENST00000270722 LONRF3Q496Y0 759 aa13.93□□□□□ -0.18
PRDM16-201ENST00000270722 CCDC162PA2VCL2 907 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 PSMD14O00487 310 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 RUNX1T1Q06455 604 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 ILF2Q12905 390 aaKnown RBP13.92□□□□□ -0.18
PRDM16-201ENST00000270722 CCDC85BQ15834 202 aaPredicted RBP13.92□□□□□ -0.18
PRDM16-201ENST00000270722 TRIM48Q8IWZ4 208 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 SYT2Q8N9I0 419 aaPredicted RBP13.92□□□□□ -0.18
PRDM16-201ENST00000270722 SCFD2Q8WU76 684 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 MTA1Q13330 715 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 POLNQ7Z5Q5 900 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 HES6Q96HZ4 224 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 GTSE1Q9NYZ3 720 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 KAT6AQ92794 2004 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 SORBS3O60504 671 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 PLS3P13797 630 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 DCAF4L1Q3SXM0 396 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 ZNF438Q7Z4V0 828 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 SUN5Q8TC36 379 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 ITFG2Q969R8 447 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 MED15Q96RN5 788 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 IP6K2Q9UHH9 426 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 BTBD18B2RXH4 712 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 CFLARO15519 480 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 PRMT3O60678 531 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 CCNE1P24864 410 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 EPS8Q12929 822 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 SPON2Q9BUD6 331 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 HOXA2O43364 376 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 GGPS1O95749 300 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 ARMCX4Q5H9R4 360 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 BTBD7Q9P203 1132 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 AREL1O15033 823 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 SLC26A4O43511 780 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 ACADSP16219 412 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 SP100P23497 879 aaPredicted RBP13.92□□□□□ -0.18
PRDM16-201ENST00000270722 COG1Q8WTW3 980 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 WDR35Q9P2L0 1181 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 ZHX2Q9Y6X8 837 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 NEO1Q92859 1461 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 ABCC2Q92887 1545 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 PRPF3O43395 683 aaKnown RBP13.92□□□□□ -0.18
PRDM16-201ENST00000270722 SLC2A3P11169 496 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 PTGS2P35354 604 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 GNL1P36915 607 aaPredicted RBP13.92□□□□□ -0.18
PRDM16-201ENST00000270722 ANKS6Q68DC2 871 aa13.92□□□□□ -0.18
PRDM16-201ENST00000270722 ADAT2Q7Z6V5 191 aaKnown RBP13.92□□□□□ -0.18
PRDM16-201ENST00000270722 PRRG1O14668 218 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 TRIM49P0CI25 452 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 TRIM49CP0CI26 452 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 STAG3L1P0CL83 205 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 C8orf34Q49A92 452 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 EXT2Q93063 718 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 PMS2P54278 862 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 TMEM154Q6P9G4 183 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 PRR23BQ6ZRT6 265 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 TAS2R42Q7RTR8 314 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 SH3BP1Q9Y3L3 701 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 CCDC22O60826 627 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 EIF2AK2P19525 551 aaKnown RBP13.91□□□□□ -0.18
PRDM16-201ENST00000270722 RAD23BP54727 409 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 MTTPP55157 894 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 TGM3Q08188 693 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 SPATA2LQ8IUW3 424 aaPredicted RBP13.91□□□□□ -0.18
PRDM16-201ENST00000270722 KDM5CP41229 1560 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 CTCFP49711 727 aaPredicted RBP13.91□□□□□ -0.18
PRDM16-201ENST00000270722 KCNQ4P56696 695 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 BNC1Q01954 994 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 CCDC153Q494R4 210 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 TSPYL6Q8N831 410 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 SLITRK1Q96PX8 696 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 ASMTLO95671 621 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 CD4P01730 458 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 IFNAR1P17181 557 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 BCAR1P56945 870 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 NUP107P57740 925 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 WRNIP1Q96S55 665 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 ZFYVE28Q9HCC9 887 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 TMEM161AQ9NX61 479 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.91□□□□□ -0.18
PRDM16-201ENST00000270722 HOXC6P09630 235 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 OSTNP61366 133 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 SUZ12Q15022 739 aaKnown RBP13.91□□□□□ -0.18
PRDM16-201ENST00000270722 APOA5Q6Q788 366 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 CATSPER3Q86XQ3 398 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 STMND1H3BQB6 276 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 PDIA3P30101 505 aaKnown RBP13.91□□□□□ -0.18
PRDM16-201ENST00000270722 CHRNA3P32297 505 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 SNRNP48Q6IEG0 339 aaKnown RBP13.91□□□□□ -0.18
PRDM16-201ENST00000270722 GLB1LQ6UWU2 654 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 EURLQ9NYK6 297 aa13.91□□□□□ -0.18
PRDM16-201ENST00000270722 HMOX2P30519 316 aa13.9□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms