RNA–Protein interactions for RNA: ENST00000269485.11

TNFRSF11A-201, Transcript of TNF receptor superfamily member 11a, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF11A, Length 3,591 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11A-201ENST00000269485 RWDD2BP57060 319 aa15.1■□□□□ 0.01
TNFRSF11A-201ENST00000269485 GPC2Q8N158 579 aa15.1■□□□□ 0.01
TNFRSF11A-201ENST00000269485 ZNF473Q8WTR7 871 aaKnown RBP15.1■□□□□ 0.01
TNFRSF11A-201ENST00000269485 RRAGCQ9HB90 399 aa15.1■□□□□ 0.01
TNFRSF11A-201ENST00000269485 TBX20Q9UMR3 447 aa15.1■□□□□ 0.01
TNFRSF11A-201ENST00000269485 SNX12Q9UMY4 172 aa15.1■□□□□ 0.01
TNFRSF11A-201ENST00000269485 DDX3XO00571 662 aaKnown RBP eCLIP15.09■□□□□ 0.011e-9■■■■□ 24.4
TNFRSF11A-201ENST00000269485 FAM153BP0C7A2 387 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 ADCYAP1R1P41586 468 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 FAM153CQ494X1 144 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 SV2AQ7L0J3 742 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 CEP63Q96MT8 703 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 CCT8L2Q96SF2 557 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 SPATC1LQ9H0A9 340 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 CYP26B1Q9NR63 512 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 CNOT8Q9UFF9 292 aaKnown RBP15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 FAM153AQ9UHL3 310 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 CCL15-CCL14A0A0B4J2E2 113 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 AGPSO00116 658 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 PIK3CDO00329 1044 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 TBC1D12O60347 775 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 KRT76Q01546 638 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 CCL15Q16663 113 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 KCNT1Q5JUK3 1230 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 CYP4F22Q6NT55 531 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 SEMA4DQ92854 862 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 FAM184BQ9ULE4 1060 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 EXOC7Q9UPT5 735 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 PCDHA2Q9Y5H9 948 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 LAMB1P07942 1786 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 GLI1P08151 1106 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 NEFHP12036 1026 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 LSP1P33241 339 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 SOX5P35711 763 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 ZNF280AP59817 542 aaPredicted RBP15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 PPP2R5CQ13362 524 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 FKBP1CQ5VVH2 108 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 PCNX4Q63HM2 1172 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 TRAPPC11Q7Z392 1133 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 RIT2Q99578 217 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 TMEM117Q9H0C3 514 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 APEX2Q9UBZ4 518 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 PARP2Q9UGN5 583 aa15.09■□□□□ 0.01
TNFRSF11A-201ENST00000269485 IGSF9BQ9UPX0 1349 aa15.08■□□□□ 0.01
TNFRSF11A-201ENST00000269485 DIAPH2O60879 1101 aa15.08■□□□□ 0.01
TNFRSF11A-201ENST00000269485 PDHA1P08559 390 aa15.08■□□□□ 0.01
TNFRSF11A-201ENST00000269485 POLE2P56282 527 aa15.08■□□□□ 0.01
TNFRSF11A-201ENST00000269485 SPRED3Q2MJR0 410 aa15.08■□□□□ 0.01
TNFRSF11A-201ENST00000269485 ZCWPW2Q504Y3 356 aa15.08■□□□□ 0.01
TNFRSF11A-201ENST00000269485 AFG1LQ8WV93 481 aa15.08■□□□□ 0.01
TNFRSF11A-201ENST00000269485 KRT35Q92764 455 aa15.08■□□□□ 0.01
TNFRSF11A-201ENST00000269485 NUP85Q9BW27 656 aa15.08■□□□□ 0.01
TNFRSF11A-201ENST00000269485 TLR10Q9BXR5 811 aa15.08■□□□□ 0.01
TNFRSF11A-201ENST00000269485 FAM49BQ9NUQ9 324 aa15.08■□□□□ 0.01
TNFRSF11A-201ENST00000269485 NR2E1Q9Y466 385 aa15.08■□□□□ 0.01
TNFRSF11A-201ENST00000269485 PCK1P35558 622 aa15.08■□□□□ 0
TNFRSF11A-201ENST00000269485 TUBB4BP68371 445 aa15.08■□□□□ 0
TNFRSF11A-201ENST00000269485 ASAP3Q8TDY4 903 aa15.08■□□□□ 0
TNFRSF11A-201ENST00000269485 UMODL1Q5DID0 1318 aa15.08■□□□□ 0
TNFRSF11A-201ENST00000269485 ACSL3O95573 720 aa15.08■□□□□ 0
TNFRSF11A-201ENST00000269485 PDGFRBP09619 1106 aa15.08■□□□□ 0
TNFRSF11A-201ENST00000269485 MAPK4P31152 587 aa15.08■□□□□ 0
TNFRSF11A-201ENST00000269485 LACTBP83111 547 aaPredicted RBP15.08■□□□□ 0
TNFRSF11A-201ENST00000269485 BEX3Q00994 111 aa15.08■□□□□ 0
TNFRSF11A-201ENST00000269485 VSIG10LQ86VR7 867 aa15.08■□□□□ 0
TNFRSF11A-201ENST00000269485 TSEN2Q8NCE0 465 aaKnown RBP15.08■□□□□ 0
TNFRSF11A-201ENST00000269485 PWWP2AQ96N64 755 aa15.08■□□□□ 0
TNFRSF11A-201ENST00000269485 MIS12Q9H081 205 aa15.08■□□□□ 0
TNFRSF11A-201ENST00000269485 ADGRA3Q8IWK6 1321 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 KAT6AQ92794 2004 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 hCG_2014768A0A024R1R8 64 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 FOXO6A8MYZ6 492 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 DHX15O43143 795 aaKnown RBP15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 RAD51CO43502 376 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 SNUPNO95149 360 aaKnown RBP15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 UBA1P22314 1058 aaKnown RBP15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 NSFP46459 744 aaKnown RBP15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 YARSP54577 528 aaKnown RBP15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 MXRA7P84157 204 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 ATP13A4Q4VNC1 1196 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 CATSPERGQ6ZRH7 1159 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 OR5B17Q8NGF7 314 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 CRYGNQ8WXF5 182 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 GRID2IPA4D2P6 1211 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 CFHP08603 1231 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 CA8P35219 290 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 HSD17B4P51659 736 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 RABGGTBP53611 331 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 HUNKP57058 714 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 ATP11AP98196 1134 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 KRT71Q3SY84 523 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 DENND2CQ68D51 928 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 EFCAB12Q6NXP0 572 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 MOXD1Q6UVY6 613 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 UBA3Q8TBC4 463 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 NRBP2Q9NSY0 501 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 NOC2LQ9Y3T9 749 aaKnown RBP15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 SNCAIPQ9Y6H5 919 aa15.07■□□□□ 0
TNFRSF11A-201ENST00000269485 EMC1Q8N766 993 aa15.06■□□□□ 0
TNFRSF11A-201ENST00000269485 C3orf20Q8ND61 904 aa15.06■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms