RNA–Protein interactions for RNA: ENST00000267838.6

LYSMD2-201, Transcript of LysM domain containing 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LYSMD2, Length 1,759 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2-201ENST00000267838 WDR44Q5JSH3 913 aa22.15■■□□□ 1.14
LYSMD2-201ENST00000267838 TRIM58Q8NG06 486 aa22.15■■□□□ 1.14
LYSMD2-201ENST00000267838 OR5B17Q8NGF7 314 aa22.15■■□□□ 1.14
LYSMD2-201ENST00000267838 PPP1R13LQ8WUF5 828 aa22.15■■□□□ 1.14
LYSMD2-201ENST00000267838 ELMO3Q96BJ8 720 aa22.15■■□□□ 1.14
LYSMD2-201ENST00000267838 KATNAL1Q9BW62 490 aa22.15■■□□□ 1.14
LYSMD2-201ENST00000267838 ATP8B3O60423 1300 aa22.15■■□□□ 1.14
LYSMD2-201ENST00000267838 SMIM35A0A1B0GVV1 85 aa22.15■■□□□ 1.14
LYSMD2-201ENST00000267838 PRKCZQ05513 592 aa22.15■■□□□ 1.14
LYSMD2-201ENST00000267838 ENOSF1Q7L5Y1 443 aa22.15■■□□□ 1.14
LYSMD2-201ENST00000267838 GLYCTKQ8IVS8 523 aa22.15■■□□□ 1.14
LYSMD2-201ENST00000267838 RNF10Q8N5U6 811 aaKnown RBP22.15■■□□□ 1.14
LYSMD2-201ENST00000267838 U2AF1L4Q8WU68 220 aaKnown RBP22.15■■□□□ 1.14
LYSMD2-201ENST00000267838 FAM49AQ9H0Q0 323 aaPredicted RBP22.15■■□□□ 1.14
LYSMD2-201ENST00000267838 SALL4Q9UJQ4 1053 aa22.15■■□□□ 1.14
LYSMD2-201ENST00000267838 CAPN6Q9Y6Q1 641 aa22.15■■□□□ 1.14
LYSMD2-201ENST00000267838 CCDC151A5D8V7 595 aa22.14■■□□□ 1.13
LYSMD2-201ENST00000267838 MCF2P10911 925 aa22.14■■□□□ 1.13
LYSMD2-201ENST00000267838 CYP2C9P11712 490 aa22.14■■□□□ 1.13
LYSMD2-201ENST00000267838 TNFAIP3P21580 790 aa22.14■■□□□ 1.13
LYSMD2-201ENST00000267838 CDC42EP1Q00587 391 aa22.14■■□□□ 1.13
LYSMD2-201ENST00000267838 FAM212AQ96EL1 285 aa22.14■■□□□ 1.13
LYSMD2-201ENST00000267838 CPB2Q96IY4 423 aa22.14■■□□□ 1.13
LYSMD2-201ENST00000267838 AGPAT1Q99943 283 aa22.14■■□□□ 1.13
LYSMD2-201ENST00000267838 PDZD7Q9H5P4 517 aa22.14■■□□□ 1.13
LYSMD2-201ENST00000267838 GPR25O00155 361 aa22.13■■□□□ 1.13
LYSMD2-201ENST00000267838 PHACTR2O75167 634 aa22.13■■□□□ 1.13
LYSMD2-201ENST00000267838 ARF4P18085 180 aaPredicted RBP22.13■■□□□ 1.13
LYSMD2-201ENST00000267838 OSTNP61366 133 aa22.13■■□□□ 1.13
LYSMD2-201ENST00000267838 ADAM17P78536 824 aa22.13■■□□□ 1.13
LYSMD2-201ENST00000267838 PURAQ00577 322 aaKnown RBP22.13■■□□□ 1.13
LYSMD2-201ENST00000267838 HIC1Q14526 733 aa22.13■■□□□ 1.13
LYSMD2-201ENST00000267838 CEP120Q8N960 986 aa22.13■■□□□ 1.13
LYSMD2-201ENST00000267838 NOX5Q96PH1 765 aa22.13■■□□□ 1.13
LYSMD2-201ENST00000267838 ALS2CR12Q96Q35 445 aa22.13■■□□□ 1.13
LYSMD2-201ENST00000267838 ADAMTS10Q9H324 1103 aa22.13■■□□□ 1.13
LYSMD2-201ENST00000267838 ANO9A1A5B4 782 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 BTNL10A8MVZ5 291 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 TSPAN1O60635 241 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 ERLIN2O94905 339 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 C6orf222P0C671 652 aaPredicted RBP22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 SP3Q02447 781 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 KIZQ2M2Z5 673 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 RUFY4Q6ZNE9 571 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 PARD6BQ9BYG5 372 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 CREBZFQ9NS37 354 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 ANK1P16157 1881 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 CASP8AP2Q9UKL3 1982 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 MYADML2A6NDP7 307 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 ENC1O14682 589 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 CYP26A1O43174 497 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 BUB1O43683 1085 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 GPR32O75388 356 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 SGPL1O95470 568 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 ATP1A1P05023 1023 aaKnown RBP22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 H2AFZP0C0S5 128 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 GJA9P57773 515 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 AMPD2Q01433 879 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 TMEM62Q0P6H9 643 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 H2AFVQ71UI9 128 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 SLC20A1Q8WUM9 679 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 UBXN6Q9BZV1 441 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 RPF1Q9H9Y2 349 aaKnown RBP22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 INTUQ9ULD6 942 aa22.12■■□□□ 1.13
LYSMD2-201ENST00000267838 KPNA6O60684 536 aa22.11■■□□□ 1.13
LYSMD2-201ENST00000267838 IL18RAPO95256 599 aa22.11■■□□□ 1.13
LYSMD2-201ENST00000267838 TUBBP07437 444 aa22.11■■□□□ 1.13
LYSMD2-201ENST00000267838 NAP1L1P55209 391 aaKnown RBP22.11■■□□□ 1.13
LYSMD2-201ENST00000267838 CAP1Q01518 475 aa22.11■■□□□ 1.13
LYSMD2-201ENST00000267838 NCOA4Q13772 614 aa22.11■■□□□ 1.13
LYSMD2-201ENST00000267838 WHAMMP3Q1A5X7 153 aa22.11■■□□□ 1.13
LYSMD2-201ENST00000267838 DUOXA2Q1HG44 320 aa22.11■■□□□ 1.13
LYSMD2-201ENST00000267838 PAPD7Q5XG87 772 aaKnown RBP22.11■■□□□ 1.13
LYSMD2-201ENST00000267838 SPOPLQ6IQ16 392 aa22.11■■□□□ 1.13
LYSMD2-201ENST00000267838 DNAAF5Q86Y56 855 aa22.11■■□□□ 1.13
LYSMD2-201ENST00000267838 TMEM192Q8IY95 271 aa22.11■■□□□ 1.13
LYSMD2-201ENST00000267838 EPS8L1Q8TE68 723 aa22.11■■□□□ 1.13
LYSMD2-201ENST00000267838 DHX38Q92620 1227 aaKnown RBP22.11■■□□□ 1.13
LYSMD2-201ENST00000267838 GCOM2Q9BZD3 368 aaPredicted RBP22.11■■□□□ 1.13
LYSMD2-201ENST00000267838 MTMR12Q9C0I1 747 aa22.11■■□□□ 1.13
LYSMD2-201ENST00000267838 SEPT11Q9NVA2 429 aaKnown RBP22.11■■□□□ 1.13
LYSMD2-201ENST00000267838 C17orf102A2RUQ5 167 aa22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 B4GALT4O60513 344 aa22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 SEC31AO94979 1220 aaKnown RBP22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 CLTAP09496 248 aa22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 STAG3L1P0CL83 205 aa22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 CXCL8P10145 99 aa22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 TRAPPC11Q7Z392 1133 aa22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 RPUSD2Q8IZ73 545 aaKnown RBP22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 HNRNPLLQ8WVV9 542 aaKnown RBP22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 APOBEC3GQ9HC16 384 aaKnown RBP22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 NOCTQ9UK39 431 aaKnown RBP22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 JRKLQ9Y4A0 524 aa22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 A0A1B0GUA9 196 aa22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 TREHO43280 583 aa22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 TRIM32Q13049 653 aa22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 KYAT1Q16773 422 aa22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 NOP9Q86U38 636 aaKnown RBP22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 SLC47A2Q86VL8 602 aa22.1■■□□□ 1.13
LYSMD2-201ENST00000267838 DNAJB3Q8WWF6 145 aa22.1■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms