RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 ADAMTS5Q9UNA0 930 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 ATP8A1Q9Y2Q0 1164 aa13.83□□□□□ -0.2
CPSF6-201ENST00000266679 TCRBV7S2A1N4TA0A589 114 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 PTGIRP43119 386 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 POLGP54098 1239 aaPredicted RBP13.82□□□□□ -0.2
CPSF6-201ENST00000266679 CLEC16AQ2KHT3 1053 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 GNPTABQ3T906 1256 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 TTC27Q6P3X3 843 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 CATSPERGQ6ZRH7 1159 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 ZDHHC14Q8IZN3 488 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 TMEM143Q96AN5 459 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 CDHR1Q96JP9 859 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.82□□□□□ -0.2
CPSF6-201ENST00000266679 ARHGAP28Q9P2N2 729 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 CNOT8Q9UFF9 292 aaKnown RBP13.82□□□□□ -0.2
CPSF6-201ENST00000266679 FEZ2Q9UHY8 353 aaPredicted RBP13.82□□□□□ -0.2
CPSF6-201ENST00000266679 SPATA31C2B4DYI2 1134 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 CTNNA2P26232 953 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 CHRNA3P32297 505 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 LSP1P33241 339 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 WNT7BP56706 349 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 RTP1P59025 263 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 FKBP1BP68106 108 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 SP2Q02086 613 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 BRDTQ58F21 947 aaPredicted RBP13.82□□□□□ -0.2
CPSF6-201ENST00000266679 ACAD10Q6JQN1 1059 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 PHLDB2Q86SQ0 1253 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 MORC4Q8TE76 937 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 ZNF516Q92618 1163 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 LRRC4CQ9HCJ2 640 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 ZDHHC18Q9NUE0 388 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 UVRAGQ9P2Y5 699 aa13.82□□□□□ -0.2
CPSF6-201ENST00000266679 BRCA2P51587 3418 aa13.81□□□□□ -0.2
CPSF6-201ENST00000266679 SPDYE16A6NNV3 312 aaPredicted RBP13.81□□□□□ -0.2
CPSF6-201ENST00000266679 C19orf81C9J6K1 198 aa13.81□□□□□ -0.2
CPSF6-201ENST00000266679 KIAA0391O15091 583 aaKnown RBP13.81□□□□□ -0.2
CPSF6-201ENST00000266679 EXTL3O43909 919 aa13.81□□□□□ -0.2
CPSF6-201ENST00000266679 PPFIA2O75334 1257 aa13.81□□□□□ -0.2
CPSF6-201ENST00000266679 NF2P35240 595 aa13.81□□□□□ -0.2
CPSF6-201ENST00000266679 PIK3CAP42336 1068 aa13.81□□□□□ -0.2
CPSF6-201ENST00000266679 PLTPP55058 493 aa13.81□□□□□ -0.2
CPSF6-201ENST00000266679 NLRP11P59045 1033 aaKnown RBP13.81□□□□□ -0.2
CPSF6-201ENST00000266679 LLGL1Q15334 1064 aa13.81□□□□□ -0.2
CPSF6-201ENST00000266679 XKR3Q5GH77 459 aa13.81□□□□□ -0.2
CPSF6-201ENST00000266679 ZDHHC24Q6UX98 284 aa13.81□□□□□ -0.2
CPSF6-201ENST00000266679 ASAP3Q8TDY4 903 aa13.81□□□□□ -0.2
CPSF6-201ENST00000266679 CLMNQ96JQ2 1002 aa13.81□□□□□ -0.2
CPSF6-201ENST00000266679 RNF186Q9NXI6 227 aa13.81□□□□□ -0.2
CPSF6-201ENST00000266679 A6NNZ2 444 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 NDUFAB1O14561 156 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 PEX10O60683 326 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 ERLIN2O94905 339 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 GGPS1O95749 300 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 ACOT2P49753 483 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 IFFO1Q0D2I5 559 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 STRN3Q13033 797 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 KRT71Q3SY84 523 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 TUBB8Q3ZCM7 444 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 SPOPLQ6IQ16 392 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 CCDC137Q6PK04 289 aaKnown RBP13.8□□□□□ -0.2
CPSF6-201ENST00000266679 RUFY4Q6ZNE9 571 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 SLC13A5Q86YT5 568 aaPredicted RBP13.8□□□□□ -0.2
CPSF6-201ENST00000266679 FNBP1Q96RU3 617 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 TXLNGYQ9BZA5 131 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 PCDHA3Q9Y5H8 950 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 LRRIQ4A6NIV6 560 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 H0YCG3 227 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 EBAG9O00559 213 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 HLA-DRAP01903 254 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 OATP04181 439 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 TNNI1P19237 187 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 ATP4AP20648 1035 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 MDH1P40925 334 aaKnown RBP13.8□□□□□ -0.2
CPSF6-201ENST00000266679 RPL21P46778 160 aaKnown RBP13.8□□□□□ -0.2
CPSF6-201ENST00000266679 CNTN2Q02246 1040 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 GCNT1Q02742 428 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 BIRC3Q13489 604 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 PSMD6Q15008 389 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 PTGISQ16647 500 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 AGBL2Q5U5Z8 902 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 SEPT14Q6ZU15 432 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 ENOSF1Q7L5Y1 443 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 ABHD8Q96I13 439 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 ZNF302Q9NR11 478 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 GRHL1Q9NZI5 618 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 ANAPC7Q9UJX3 599 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 NOVA2Q9UNW9 492 aaKnown RBP13.8□□□□□ -0.2
CPSF6-201ENST00000266679 PTPN22Q9Y2R2 807 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 PTPRJQ12913 1337 aa13.8□□□□□ -0.2
CPSF6-201ENST00000266679 ATP2A1O14983 1001 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 CA12O43570 354 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 STAM2O75886 525 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 RWDD2BP57060 319 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 ODF2Q5BJF6 829 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 EMC10Q5UCC4 262 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 TDRD10Q5VZ19 366 aaKnown RBP13.79□□□□□ -0.2
CPSF6-201ENST00000266679 LLGL2Q6P1M3 1020 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 C15orf39Q6ZRI6 1047 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 DEPTORQ8TB45 409 aa13.79□□□□□ -0.2
CPSF6-201ENST00000266679 FBXO25Q8TCJ0 367 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 81 ms