RNA–Protein interactions for RNA: ENST00000266661.8

BEST3-201, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 1,876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-201ENST00000266661 A1CFQ9NQ94 594 aaKnown RBP13.32□□□□□ -0.28
BEST3-201ENST00000266661 AVENQ9NQS1 362 aaPredicted RBP13.32□□□□□ -0.28
BEST3-201ENST00000266661 EXOC7Q9UPT5 735 aa13.32□□□□□ -0.28
BEST3-201ENST00000266661 NEU2Q9Y3R4 380 aa13.32□□□□□ -0.28
BEST3-201ENST00000266661 MYPNQ86TC9 1320 aa13.32□□□□□ -0.28
BEST3-201ENST00000266661 PASKQ96RG2 1323 aa13.32□□□□□ -0.28
BEST3-201ENST00000266661 RGS16O15492 202 aaPredicted RBP13.31□□□□□ -0.28
BEST3-201ENST00000266661 CTNND1O60716 968 aaKnown RBP13.31□□□□□ -0.28
BEST3-201ENST00000266661 TOMM70O94826 608 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 SFNP31947 248 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 CLDN10P78369 228 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 GCNT1Q02742 428 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 RNF207Q6ZRF8 634 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 SV2AQ7L0J3 742 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 TRMT10CQ7L0Y3 403 aaKnown RBP13.31□□□□□ -0.28
BEST3-201ENST00000266661 RDM1Q8NG50 284 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 EPS8L3Q8TE67 593 aaKnown RBP13.31□□□□□ -0.28
BEST3-201ENST00000266661 LPAR1Q92633 364 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 NT5C1BQ96P26 610 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 ZNF341Q9BYN7 854 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 KIAA1683Q9H0B3 1180 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 RAVER2Q9HCJ3 691 aaKnown RBP13.31□□□□□ -0.28
BEST3-201ENST00000266661 SLC40A1Q9NP59 571 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 WDR64B1ANS9 1081 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 CLDN3O15551 220 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 SPOPO43791 374 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 ITGBL1O95965 494 aaPredicted RBP13.31□□□□□ -0.28
BEST3-201ENST00000266661 FGFR4P22455 802 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 PDE6CP51160 858 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 CDR1P51861 262 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 RPS6P62753 249 aaKnown RBP13.31□□□□□ -0.28
BEST3-201ENST00000266661 KRT76Q01546 638 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 CNGA2Q16280 664 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 XKR9Q5GH70 373 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 FAM102BQ5T8I3 360 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 SAMD1Q6SPF0 538 aaPredicted RBP13.31□□□□□ -0.28
BEST3-201ENST00000266661 TAS1R3Q7RTX0 852 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 CCDC105Q8IYK2 499 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 ZNF516Q92618 1163 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 KCNN1Q92952 543 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 CCDC127Q96BQ5 260 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 KIFC3Q9BVG8 833 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 C17orf75Q9HAS0 396 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.31□□□□□ -0.28
BEST3-201ENST00000266661 PXMP2Q9NR77 195 aa13.31□□□□□ -0.28
BEST3-201ENST00000266661 TRPM7Q96QT4 1865 aa13.3□□□□□ -0.28
BEST3-201ENST00000266661 MROH7Q68CQ1 1323 aa13.3□□□□□ -0.28
BEST3-201ENST00000266661 ADGRA3Q8IWK6 1321 aa13.3□□□□□ -0.28
BEST3-201ENST00000266661 DENND3A2RUS2 1198 aa13.3□□□□□ -0.28
BEST3-201ENST00000266661 ZNF862O60290 1169 aa13.3□□□□□ -0.28
BEST3-201ENST00000266661 ZC3H11AO75152 810 aaKnown RBP eCLIP13.3□□□□□ -0.28
BEST3-201ENST00000266661 ECEL1O95672 775 aa13.3□□□□□ -0.28
BEST3-201ENST00000266661 EIF2AK2P19525 551 aaKnown RBP13.3□□□□□ -0.28
BEST3-201ENST00000266661 SCTRP47872 440 aa13.3□□□□□ -0.28
BEST3-201ENST00000266661 GTF2A1P52655 376 aaPredicted RBP13.3□□□□□ -0.28
BEST3-201ENST00000266661 PTP4A2Q12974 167 aa13.3□□□□□ -0.28
BEST3-201ENST00000266661 XRCC4Q13426 336 aa13.3□□□□□ -0.28
BEST3-201ENST00000266661 PTK6Q13882 451 aa13.3□□□□□ -0.28
BEST3-201ENST00000266661 ITIH4Q14624 930 aa13.3□□□□□ -0.28
BEST3-201ENST00000266661 NSMFQ6X4W1 530 aa13.3□□□□□ -0.28
BEST3-201ENST00000266661 ENOSF1Q7L5Y1 443 aa13.3□□□□□ -0.28
BEST3-201ENST00000266661 CPLX4Q7Z7G2 160 aa13.3□□□□□ -0.28
BEST3-201ENST00000266661 EXOC3L1Q86VI1 746 aa13.3□□□□□ -0.28
BEST3-201ENST00000266661 LRRC34Q8IZ02 419 aa13.3□□□□□ -0.28
BEST3-201ENST00000266661 MCOLN2Q8IZK6 566 aa13.3□□□□□ -0.28
BEST3-201ENST00000266661 DCPSQ96C86 337 aaKnown RBP13.3□□□□□ -0.28
BEST3-201ENST00000266661 DDX27Q96GQ7 796 aaKnown RBP13.3□□□□□ -0.28
BEST3-201ENST00000266661 TLDC2A0PJX2 215 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 CCT8L1PA6NM43 557 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 RASGRF2O14827 1237 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 DNAJC8O75937 253 aaPredicted RBP13.29□□□□□ -0.28
BEST3-201ENST00000266661 CYP1A1P04798 512 aaPredicted RBP13.29□□□□□ -0.28
BEST3-201ENST00000266661 ITIH2P19823 946 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 GARTP22102 1010 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 RTP1P59025 263 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 SYDE1Q6ZW31 735 aaPredicted RBP13.29□□□□□ -0.28
BEST3-201ENST00000266661 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.29□□□□□ -0.28
BEST3-201ENST00000266661 FUKQ8N0W3 1084 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 C1orf54Q8WWF1 131 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 KIFAP3Q92845 792 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 MOV10L1Q9BXT6 1211 aaKnown RBP13.29□□□□□ -0.28
BEST3-201ENST00000266661 TRIM7Q9C029 511 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 CDC42EP4Q9H3Q1 356 aaKnown RBP13.29□□□□□ -0.28
BEST3-201ENST00000266661 ZNF408Q9H9D4 720 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 XPNPEP1Q9NQW7 623 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 CHST7Q9NS84 486 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 KLC4Q9NSK0 619 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 TCEA3O75764 348 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 OAS1P00973 400 aaKnown RBP13.29□□□□□ -0.28
BEST3-201ENST00000266661 CALCAP01258 141 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 CHKAP35790 457 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 HTRA3P83110 453 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 KRT17Q04695 432 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 KLF1Q13351 362 aaPredicted RBP13.29□□□□□ -0.28
BEST3-201ENST00000266661 PRKG1Q13976 671 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 XRRA1Q6P2D8 792 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 VSIG10LQ86VR7 867 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 CPXCR1Q8N123 301 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 CCDC197Q8NCU1 140 aa13.29□□□□□ -0.28
BEST3-201ENST00000266661 UHMK1Q8TAS1 419 aaKnown RBP13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 341 ms