RNA–Protein interactions for RNA: ENST00000266085.6

TIMP3-201, Transcript of TIMP metallopeptidase inhibitor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP3, Length 4,603 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP3-201ENST00000266085 CASQ2O14958 399 aaPredicted RBP16.31■□□□□ 0.2
TIMP3-201ENST00000266085 GAS2O43903 313 aaKnown RBP16.31■□□□□ 0.2
TIMP3-201ENST00000266085 SLC8A1P32418 973 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 Q4G0T1 1027 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 EPC2Q52LR7 807 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 BTBD8Q5XKL5 378 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 KLC3Q6P597 504 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 PRPF31Q8WWY3 499 aaKnown RBP16.31■□□□□ 0.2
TIMP3-201ENST00000266085 GLT1D1Q96MS3 346 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 TRIM62Q9BVG3 475 aa16.31■□□□□ 0.2
TIMP3-201ENST00000266085 VWA5AO00534 786 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 MUTP22033 750 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 NPTX2P47972 431 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 GYS2P54840 703 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 ROR1Q01973 937 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 ZNF449Q6P9G9 518 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 CBWD2Q8IUF1 395 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 TTC17Q96AE7 1141 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 PGBD4Q96DM1 585 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 MYOM1P52179 1685 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 H3BRJ5 948 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 IL18RAPO95256 599 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 ZFXP17010 805 aaPredicted RBP16.3■□□□□ 0.2
TIMP3-201ENST00000266085 SESN3P58005 492 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 MAGOHP61326 146 aaKnown RBP16.3■□□□□ 0.2
TIMP3-201ENST00000266085 VSNL1P62760 191 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 GJB7Q6PEY0 223 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 CDKL3Q8IVW4 592 aaPredicted RBP16.3■□□□□ 0.2
TIMP3-201ENST00000266085 ATL2Q8NHH9 583 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 SNF8Q96H20 258 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 LRRC1Q9BTT6 524 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 BAG5Q9UL15 447 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 RRP15Q9Y3B9 282 aaKnown RBP16.3■□□□□ 0.2
TIMP3-201ENST00000266085 ZNF185O15231 689 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 PPARGP37231 505 aaPredicted RBP16.3■□□□□ 0.2
TIMP3-201ENST00000266085 CASP4P49662 377 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 CPT1AP50416 773 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 IZUMO3Q5VZ72 239 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 TTI2Q6NXR4 508 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 CBWD1Q9BRT8 395 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 FAM49BQ9NUQ9 324 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 CPA4Q9UI42 421 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 FZD1Q9UP38 647 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.3■□□□□ 0.2
TIMP3-201ENST00000266085 ITGA4P13612 1032 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 NFKBIAP25963 317 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 ZC3H18Q86VM9 953 aaKnown RBP16.3■□□□□ 0.2
TIMP3-201ENST00000266085 ZNF710Q8N1W2 664 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 PPM1NQ8N819 430 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 SPON2Q9BUD6 331 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 NIF3L1Q9GZT8 377 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 PCDHAC2Q9Y5I4 1007 aa16.3■□□□□ 0.2
TIMP3-201ENST00000266085 CXCL11O14625 94 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 VIL1P09327 827 aaKnown RBP16.29■□□□□ 0.2
TIMP3-201ENST00000266085 SERPINB6P35237 376 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 RGS2P41220 211 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 PSMC6P62333 389 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 PDIA2Q13087 525 aaKnown RBP16.29■□□□□ 0.2
TIMP3-201ENST00000266085 RBM43Q6ZSC3 357 aaKnown RBP16.29■□□□□ 0.2
TIMP3-201ENST00000266085 SYN2Q92777 582 aaPredicted RBP16.29■□□□□ 0.2
TIMP3-201ENST00000266085 FIS1Q9Y3D6 152 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 CD4P01730 458 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 SLURP2P0DP57 97 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 TMPRSS15P98073 1019 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 CDK17Q00537 523 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 CACNB2Q08289 660 aaPredicted RBP16.29■□□□□ 0.2
TIMP3-201ENST00000266085 GLB1LQ6UWU2 654 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 SENP7Q9BQF6 1050 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 MRIQ9BWK5 157 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 NT5C1AQ9BXI3 368 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 A0A087WUV0 522 aaPredicted RBP16.29■□□□□ 0.2
TIMP3-201ENST00000266085 APOEP02649 317 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 NOTUMQ6P988 496 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 TRAPPC11Q7Z392 1133 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 ZBED8Q8IZ13 594 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 NDUFAF2Q8N183 169 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 ATP11CQ8NB49 1132 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 KLHL11Q9NVR0 708 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 HPCAL4Q9UM19 191 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 C3P01024 1663 aa16.29■□□□□ 0.2
TIMP3-201ENST00000266085 F5H423 210 aaPredicted RBP16.28■□□□□ 0.2
TIMP3-201ENST00000266085 TADA2AO75478 443 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 UPP2O95045 317 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 RECQLP46063 649 aaPredicted RBP16.28■□□□□ 0.2
TIMP3-201ENST00000266085 PAPOLAP51003 745 aaKnown RBP16.28■□□□□ 0.2
TIMP3-201ENST00000266085 HP1BP3Q5SSJ5 553 aaPredicted RBP16.28■□□□□ 0.2
TIMP3-201ENST00000266085 WDR75Q8IWA0 830 aaKnown RBP16.28■□□□□ 0.2
TIMP3-201ENST00000266085 PDCD7Q8N8D1 485 aaKnown RBP16.28■□□□□ 0.2
TIMP3-201ENST00000266085 PDCD6IPQ8WUM4 868 aaKnown RBP16.28■□□□□ 0.2
TIMP3-201ENST00000266085 ELAC2Q9BQ52 826 aaKnown RBP16.28■□□□□ 0.2
TIMP3-201ENST00000266085 FAM86B1E9PN63 330 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 OGTO15294 1046 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 FAM86B2P0C5J1 330 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 TMEM253P0C7T8 217 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 BRAFP15056 766 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 CYP2C19P33261 490 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 FCGRTP55899 365 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 KRT17Q04695 432 aa16.28■□□□□ 0.2
TIMP3-201ENST00000266085 FAM133BQ5BKY9 247 aaKnown RBP16.28■□□□□ 0.2
TIMP3-201ENST00000266085 CENPPQ6IPU0 288 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 44.7 ms