RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 CWH43Q9H720 699 aa15.49■□□□□ 0.07
SSBP1-201ENST00000265304 SLC38A7Q9NVC3 462 aa15.49■□□□□ 0.07
SSBP1-201ENST00000265304 PARP2Q9UGN5 583 aa15.49■□□□□ 0.07
SSBP1-201ENST00000265304 PLAGL2Q9UPG8 496 aa15.49■□□□□ 0.07
SSBP1-201ENST00000265304 UPP2O95045 317 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 EFEMP2O95967 443 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 HARSP12081 509 aaKnown RBP15.48■□□□□ 0.07
SSBP1-201ENST00000265304 ZNF18P17022 549 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 LRPAP1P30533 357 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 GTF2H1P32780 548 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 ZNF165P49910 485 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 GATMP50440 423 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 AP3M2P53677 418 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 MYL5Q02045 173 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 C15orf39Q6ZRI6 1047 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 TMCO2Q7Z6W1 182 aaPredicted RBP15.48■□□□□ 0.07
SSBP1-201ENST00000265304 WDR49Q8IV35 697 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 TRIM59Q8IWR1 403 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 EFCAB13Q8IY85 973 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 COLGALT2Q8IYK4 626 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 FAM186BQ8IYM0 893 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 LRRC43Q8N309 656 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 URGCPQ8TCY9 931 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 TMEM175Q9BSA9 504 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 PDE11AQ9HCR9 933 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 INTS13Q9NVM9 706 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 KLK14Q9P0G3 267 aa15.48■□□□□ 0.07
SSBP1-201ENST00000265304 COLQQ9Y215 455 aaPredicted RBP15.48■□□□□ 0.07
SSBP1-201ENST00000265304 ANO9A1A5B4 782 aa15.47■□□□□ 0.07
SSBP1-201ENST00000265304 TLL1O43897 1013 aa15.47■□□□□ 0.07
SSBP1-201ENST00000265304 B4GALT3O60512 393 aa15.47■□□□□ 0.07
SSBP1-201ENST00000265304 DDHD2O94830 711 aa15.47■□□□□ 0.07
SSBP1-201ENST00000265304 RPL9P32969 192 aaKnown RBP15.47■□□□□ 0.07
SSBP1-201ENST00000265304 SCNN1GP51170 649 aa15.47■□□□□ 0.07
SSBP1-201ENST00000265304 BFSP1Q12934 665 aa15.47■□□□□ 0.07
SSBP1-201ENST00000265304 TUSC3Q13454 348 aa15.47■□□□□ 0.07
SSBP1-201ENST00000265304 USP37Q86T82 979 aa15.47■□□□□ 0.07
SSBP1-201ENST00000265304 DHX40Q8IX18 779 aaKnown RBP15.47■□□□□ 0.07
SSBP1-201ENST00000265304 ABI1Q8IZP0 508 aa15.47■□□□□ 0.07
SSBP1-201ENST00000265304 RNF169Q8NCN4 708 aa15.47■□□□□ 0.07
SSBP1-201ENST00000265304 ZNF516Q92618 1163 aa15.47■□□□□ 0.07
SSBP1-201ENST00000265304 YME1L1Q96TA2 773 aa15.47■□□□□ 0.07
SSBP1-201ENST00000265304 ANP32EQ9BTT0 268 aa15.47■□□□□ 0.07
SSBP1-201ENST00000265304 APOL6Q9BWW8 343 aa15.47■□□□□ 0.07
SSBP1-201ENST00000265304 NRDE2Q9H7Z3 1164 aa15.47■□□□□ 0.07
SSBP1-201ENST00000265304 ARMCX3Q9UH62 379 aaPredicted RBP15.47■□□□□ 0.07
SSBP1-201ENST00000265304 UBQLN1Q9UMX0 589 aaKnown RBP15.47■□□□□ 0.07
SSBP1-201ENST00000265304 PTPRJQ12913 1337 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 TBKBP1A7MCY6 615 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 GRXCR1A8MXD5 290 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 TMEM189-UBE2V1I3L0A0 370 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 XPOTO43592 962 aaKnown RBP15.46■□□□□ 0.07
SSBP1-201ENST00000265304 C4BPAP04003 597 aaKnown RBP15.46■□□□□ 0.07
SSBP1-201ENST00000265304 EPB41P11171 864 aaKnown RBP15.46■□□□□ 0.07
SSBP1-201ENST00000265304 PAX3P23760 479 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 EEF1GP26641 437 aaKnown RBP15.46■□□□□ 0.07
SSBP1-201ENST00000265304 VAMP7P51809 220 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 SOX4Q06945 474 aaPredicted RBP15.46■□□□□ 0.07
SSBP1-201ENST00000265304 BTG3Q14201 252 aaPredicted RBP15.46■□□□□ 0.07
SSBP1-201ENST00000265304 RAB30Q15771 203 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 DUOXA2Q1HG44 320 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 CEP135Q66GS9 1140 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 JADE1Q6IE81 842 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 ZNF280BQ86YH2 543 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 RDH13Q8NBN7 331 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 SLC35C1Q96A29 364 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 EEF2KMTQ96G04 330 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 DDX27Q96GQ7 796 aaKnown RBP15.46■□□□□ 0.07
SSBP1-201ENST00000265304 UROC1Q96N76 676 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 RPS6KC1Q96S38 1066 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 CGRRF1Q99675 332 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 ZBED2Q9BTP6 218 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 PBX4Q9BYU1 374 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 COQ4Q9Y3A0 265 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 NFE2L3Q9Y4A8 694 aa15.46■□□□□ 0.07
SSBP1-201ENST00000265304 LINC01553A4QN01 128 aa15.45■□□□□ 0.06
SSBP1-201ENST00000265304 LRRIQ3A6PVS8 624 aaPredicted RBP15.45■□□□□ 0.06
SSBP1-201ENST00000265304 SMTNL1A8MU46 457 aa15.45■□□□□ 0.06
SSBP1-201ENST00000265304 C5orf67F2Z3F1 127 aa15.45■□□□□ 0.06
SSBP1-201ENST00000265304 PIRO00625 290 aa15.45■□□□□ 0.06
SSBP1-201ENST00000265304 POMCP01189 267 aa15.45■□□□□ 0.06
SSBP1-201ENST00000265304 GALTP07902 379 aa15.45■□□□□ 0.06
SSBP1-201ENST00000265304 NFICP08651 508 aa15.45■□□□□ 0.06
SSBP1-201ENST00000265304 TMEM132DQ14C87 1099 aa15.45■□□□□ 0.06
SSBP1-201ENST00000265304 UPP1Q16831 310 aa15.45■□□□□ 0.06
SSBP1-201ENST00000265304 ZACNQ401N2 412 aa15.45■□□□□ 0.06
SSBP1-201ENST00000265304 FAM114A1Q8IWE2 563 aa15.45■□□□□ 0.06
SSBP1-201ENST00000265304 FIBCD1Q8N539 461 aa15.45■□□□□ 0.06
SSBP1-201ENST00000265304 FAM200AQ8TCP9 573 aa15.45■□□□□ 0.06
SSBP1-201ENST00000265304 CACTINQ8WUQ7 758 aaKnown RBP15.45■□□□□ 0.06
SSBP1-201ENST00000265304 SAMD11Q96NU1 681 aa15.45■□□□□ 0.06
SSBP1-201ENST00000265304 PLVAPQ9BX97 442 aa15.45■□□□□ 0.06
SSBP1-201ENST00000265304 SAMSN1Q9NSI8 373 aaKnown RBP15.45■□□□□ 0.06
SSBP1-201ENST00000265304 YBX2Q9Y2T7 364 aaKnown RBP15.45■□□□□ 0.06
SSBP1-201ENST00000265304 RWDD3Q9Y3V2 267 aa15.45■□□□□ 0.06
SSBP1-201ENST00000265304 MRPL42Q9Y6G3 142 aaKnown RBP15.45■□□□□ 0.06
SSBP1-201ENST00000265304 VWA8A3KMH1 1905 aa15.45■□□□□ 0.06
SSBP1-201ENST00000265304 TMEM265A0A087WTH1 108 aa15.44■□□□□ 0.06
SSBP1-201ENST00000265304 LCHNA4D1U4 455 aa15.44■□□□□ 0.06
SSBP1-201ENST00000265304 STAU1O95793 577 aaKnown RBP15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms