RNA–Protein interactions for RNA: ENST00000264640.8

SMARCE1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 3

Gene SMARCE1, Length 631 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-201ENST00000264640 CD46P15529 392 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 TECP42680 631 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 CDK17Q00537 523 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 LAMC2Q13753 1193 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 PUM1Q14671 1186 aaKnown RBP eCLIP7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 ANGPT1Q15389 498 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 SPA17Q15506 151 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 STXBP2Q15833 593 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 ST3GAL2Q16842 350 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 MAP9Q49MG5 647 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 NAALADL2Q58DX5 795 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 BTNL9Q6UXG8 535 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 SLC35F6Q8N357 371 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 GUF1Q8N442 669 aaKnown RBP7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 SYTL5Q8TDW5 730 aaPredicted RBP7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 ATP8B4Q8TF62 1192 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 LINC01599Q8WXQ3 324 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 LARP4BQ92615 738 aaKnown RBP7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 CNOT6LQ96LI5 555 aaKnown RBP7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 SPATA33Q96N06 139 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 ERGIC2Q96RQ1 377 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 WDR24Q96S15 920 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 RMDN3Q96TC7 470 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 C16orf70Q9BSU1 422 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 SETD4Q9NVD3 440 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 FAM53CQ9NYF3 392 aa7.68□□□□□ -1.18
SMARCE1-201ENST00000264640 TTC26A0AVF1 554 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 EIF3CLB5ME19 914 aaKnown RBP7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 ENPP3O14638 875 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 ZBTB5O15062 677 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 GGPS1O95749 300 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 LMNAP02545 664 aaKnown RBP7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 CHRNA1P02708 482 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 WEE2P0C1S8 567 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 PNMA6AP0CW24 399 aaPredicted RBP7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 SNHG28P0DPA3 235 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 HOXD8P13378 290 aaPredicted RBP7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 ZSCAN20P17040 1043 aaPredicted RBP7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 HOXC8P31273 242 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 TXKP42681 527 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 INSM1Q01101 510 aaPredicted RBP7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 ZNF543Q08ER8 600 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 LPIN1Q14693 890 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 MEA1Q16626 185 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 MAN2A1Q16706 1144 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 DUSP6Q16828 381 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 RSPO4Q2I0M5 234 aaPredicted RBP7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 ARHGEF16Q5VV41 709 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 CENPPQ6IPU0 288 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 TTI2Q6NXR4 508 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 ANKRD54Q6NXT1 300 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 SYCE2Q6PIF2 218 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 TRIM50Q86XT4 487 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 CCDC65Q8IXS2 484 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 UBALD2Q8IYN6 164 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 DCLK2Q8N568 766 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 KCTD17Q8N5Z5 321 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 ERMNQ8TAM6 284 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 CYP2W1Q8TAV3 490 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 ZNF507Q8TCN5 953 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 NSUN6Q8TEA1 469 aaKnown RBP7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 SNX29Q8TEQ0 813 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 HNRNPLLQ8WVV9 542 aaKnown RBP7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 RUBCNQ92622 972 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 RAD54LQ92698 747 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 EIF3CQ99613 913 aaKnown RBP7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 USB1Q9BQ65 265 aaKnown RBP7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 S1PR5Q9H228 398 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 RNPEPQ9H4A4 650 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 POMKQ9H5K3 350 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 BCAS3Q9H6U6 928 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 MRPL44Q9H9J2 332 aaKnown RBP7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 MYO6Q9UM54 1294 aa7.67□□□□□ -1.18
SMARCE1-201ENST00000264640 MIA3Q5JRA6 1907 aa7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 ANO9A1A5B4 782 aa7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 PP2D1A8MPX8 630 aa7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 H3BRB1 525 aa7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 TERTO14746 1132 aaKnown RBP7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 CAND2O75155 1236 aa7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 PPFIA4O75335 1185 aa7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 TACC1O75410 805 aa7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 ZRANB2O95218 330 aaKnown RBP eCLIP7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 FOSP01100 380 aaPredicted RBP7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 LGALS2P05162 132 aa7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 MYCLP12524 364 aaPredicted RBP7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 UBA1P22314 1058 aaKnown RBP7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 CDC25AP30304 524 aa7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 USP11P51784 963 aa7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 CLCN5P51795 746 aa7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 ERVFC1P60507 584 aa7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 ARHGAP4P98171 946 aa7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 SP2Q02086 613 aa7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 KIF5AQ12840 1032 aa7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 AP3B2Q13367 1082 aa7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 COL9A2Q14055 689 aaPredicted RBP7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 MTF1Q14872 753 aa7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 CELF3Q5SZQ8 465 aaKnown RBP7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 PLPP4Q5VZY2 271 aa7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 HAUS3Q68CZ6 603 aa7.66□□□□□ -1.18
SMARCE1-201ENST00000264640 CC2D1AQ6P1N0 951 aaPredicted RBP7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms