RNA–Protein interactions for RNA: ENST00000264039.6

GPC1-201, Transcript of glypican 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC1, Length 3,713 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-201ENST00000264039 SP4Q02446 784 aa17.25■□□□□ 0.35
GPC1-201ENST00000264039 DCAF12L1Q5VU92 463 aa17.25■□□□□ 0.35
GPC1-201ENST00000264039 DCUN1D2Q6PH85 259 aa17.25■□□□□ 0.35
GPC1-201ENST00000264039 EFCAB3Q8N7B9 438 aa17.25■□□□□ 0.35
GPC1-201ENST00000264039 PYDC1Q8WXC3 89 aa17.25■□□□□ 0.35
GPC1-201ENST00000264039 GRHL1Q9NZI5 618 aa17.25■□□□□ 0.35
GPC1-201ENST00000264039 LMCD1Q9NZU5 365 aa17.25■□□□□ 0.35
GPC1-201ENST00000264039 DIP2CQ9Y2E4 1556 aa17.25■□□□□ 0.35
GPC1-201ENST00000264039 TBX10O75333 385 aa17.25■□□□□ 0.35
GPC1-201ENST00000264039 CERKLQ49MI3 558 aaPredicted RBP17.25■□□□□ 0.35
GPC1-201ENST00000264039 CELF1Q92879 486 aaKnown RBP17.25■□□□□ 0.35
GPC1-201ENST00000264039 OLFM3Q96PB7 478 aa17.25■□□□□ 0.35
GPC1-201ENST00000264039 DNAJC18Q9H819 358 aa17.25■□□□□ 0.35
GPC1-201ENST00000264039 ETNK2Q9NVF9 386 aa17.25■□□□□ 0.35
GPC1-201ENST00000264039 ZNF189O75820 626 aaPredicted RBP17.25■□□□□ 0.35
GPC1-201ENST00000264039 MYL2P10916 166 aa17.25■□□□□ 0.35
GPC1-201ENST00000264039 ARSEP51690 589 aa17.25■□□□□ 0.35
GPC1-201ENST00000264039 MTHFD1LQ6UB35 978 aa17.25■□□□□ 0.35
GPC1-201ENST00000264039 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.25■□□□□ 0.35
GPC1-201ENST00000264039 LRMDAQ9H2I8 198 aa17.25■□□□□ 0.35
GPC1-201ENST00000264039 MEI4A8MW99 385 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 RALAP11233 206 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 FGFR2P21802 821 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 IGBP1P78318 339 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 ACSBG2Q5FVE4 666 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 FAM182AQ5T1J6 154 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 RNF43Q68DV7 783 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 BTBD10Q9BSF8 475 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 WNT8AQ9H1J5 351 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 ARL8BQ9NVJ2 186 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 APEX2Q9UBZ4 518 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 PACSIN3Q9UKS6 424 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 USP17L10C9JJH3 530 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 LPXNO60711 386 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 MED24O75448 989 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 GM2AP17900 193 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 RPS8P62241 208 aaKnown RBP17.24■□□□□ 0.35
GPC1-201ENST00000264039 ARID3BQ8IVW6 561 aaPredicted RBP17.24■□□□□ 0.35
GPC1-201ENST00000264039 LRRC43Q8N309 656 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 C3P01024 1663 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 ABCB11O95342 1321 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 CES2O00748 559 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 BTDP43251 543 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 GALNT4Q8N4A0 578 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 SLC35C1Q96A29 364 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 FAM111AQ96PZ2 611 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 TMEM117Q9H0C3 514 aa17.24■□□□□ 0.35
GPC1-201ENST00000264039 DMAP1Q9NPF5 467 aaPredicted RBP17.24■□□□□ 0.35
GPC1-201ENST00000264039 ZSCAN5DPP0CG00 497 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 BSPRYQ5W0U4 402 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 C4orf50Q6ZRC1 276 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 ZBTB46Q86UZ6 589 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 AGR3Q8TD06 166 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 KAT5Q92993 513 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 DNAJC19Q96DA6 116 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 PLA2G12BQ9BX93 195 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 PAIP2BQ9ULR5 123 aaKnown RBP17.23■□□□□ 0.35
GPC1-201ENST00000264039 COG5Q9UP83 839 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 A0A1W2PPM1 405 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 BANF1O75531 89 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 BMP3P12645 472 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 KRT10P13645 584 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 MXI1P50539 228 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 MGAT5Q09328 741 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 ATL2Q8NHH9 583 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 ACAP3Q96P50 834 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 C11orf70Q9BRQ4 267 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 APPL1Q9UKG1 709 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 LRRC42Q9Y546 428 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 GJB6O95452 261 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 SGPL1O95470 568 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 LYNP07948 512 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 NSFP46459 744 aaKnown RBP17.23■□□□□ 0.35
GPC1-201ENST00000264039 PDIA5Q14554 519 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 TRIML2Q8N7C3 387 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 CPA5Q8WXQ8 436 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 ZNF75CPQ92670 426 aaPredicted RBP17.23■□□□□ 0.35
GPC1-201ENST00000264039 TEKT1Q969V4 418 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 UTP4Q969X6 686 aaKnown RBP17.23■□□□□ 0.35
GPC1-201ENST00000264039 TUBGCP6Q96RT7 1819 aa17.23■□□□□ 0.35
GPC1-201ENST00000264039 GALK1P51570 392 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 C12orf60Q5U649 245 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 PCNX4Q63HM2 1172 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 OTOAQ7RTW8 1153 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 RASGEF1CQ8N431 466 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 POU5F2Q8N7G0 328 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 RSAD2Q8WXG1 361 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 ERLEC1Q96DZ1 483 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 MANSC1Q9H8J5 431 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 TECPR2O15040 1411 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 DDX3YO15523 660 aaKnown RBP17.22■□□□□ 0.35
GPC1-201ENST00000264039 WDR4P57081 412 aaKnown RBP17.22■□□□□ 0.35
GPC1-201ENST00000264039 RTP1P59025 263 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 TCP10Q12799 353 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 EDRF1Q3B7T1 1238 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 ERFEQ4G0M1 354 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 RFWD2Q8NHY2 731 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 ZNF333Q96JL9 665 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 TUBGCP5Q96RT8 1024 aa17.22■□□□□ 0.35
GPC1-201ENST00000264039 SIKE1Q9BRV8 207 aa17.22■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms