RNA–Protein interactions for RNA: ENST00000261674.8

SFSWAP-201, Transcript of splicing factor SWAP, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SFSWAP, Length 3,246 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-201ENST00000261674 IL31RAQ8NI17 732 aa15.47■□□□□ 0.07
SFSWAP-201ENST00000261674 NSRP1Q9H0G5 558 aaKnown RBP15.47■□□□□ 0.07
SFSWAP-201ENST00000261674 WNT8AQ9H1J5 351 aa15.47■□□□□ 0.07
SFSWAP-201ENST00000261674 YY1AP1Q9H869 796 aa15.47■□□□□ 0.07
SFSWAP-201ENST00000261674 POLR2AP24928 1970 aaKnown RBP15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 ADRB2P07550 413 aa15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 RARGP13631 454 aa15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 FAM47EQ6ZV65 393 aa15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 FMNL3Q8IVF7 1028 aa15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 C3orf20Q8ND61 904 aa15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 EHMT1Q9H9B1 1298 aa15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 CCPG1Q9ULG6 757 aa15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 GLTPD2A6NH11 291 aa15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 ASNSP08243 561 aa15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 HSPA6P17066 643 aa15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 ZNF131P52739 623 aa15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 MFAP3P55082 362 aa15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 ELF3P78545 371 aaPredicted RBP15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 GSTA5Q7RTV2 222 aa15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 PASD1Q8IV76 773 aa15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 MTMR14Q8NCE2 650 aa15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 TAS1R2Q8TE23 839 aa15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 CHURC1Q8WUH1 139 aa15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 KDM4CQ9H3R0 1056 aa15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 PGAP2Q9UHJ9 254 aa15.46■□□□□ 0.07
SFSWAP-201ENST00000261674 PFASO15067 1338 aa15.46■□□□□ 0.06
SFSWAP-201ENST00000261674 CNGA2Q16280 664 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 STMN4Q9H169 189 aaPredicted RBP15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 TMEM206Q9H813 350 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 NOD2Q9HC29 1040 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 GEMIN8Q9NWZ8 242 aaKnown RBP15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 PCYOX1Q9UHG3 505 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 NFIBO00712 420 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 BRAFP15056 766 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 CYP11B1P15538 503 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 KCNJ2P63252 427 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 FMO1Q01740 532 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 SNRNP35Q16560 246 aaKnown RBP15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 KAZNQ674X7 775 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 C11orf63Q6NUN7 778 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 BICD1Q96G01 975 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 RAVER2Q9HCJ3 691 aaKnown RBP15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 KLHL11Q9NVR0 708 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 CTNNA2P26232 953 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 STX2P32856 288 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 MMP14P50281 582 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 ITGA8P53708 1063 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 DRG2P55039 364 aaKnown RBP15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 MYO1EQ12965 1108 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 POMGNT1Q8WZA1 660 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.45■□□□□ 0.062e-6■■□□□ 12.6
SFSWAP-201ENST00000261674 AGAP1Q9UPQ3 857 aa15.45■□□□□ 0.06
SFSWAP-201ENST00000261674 P4HBP07237 508 aaKnown RBP15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 RARRES1P49788 294 aa15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 VGLL4Q14135 290 aa15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 NAA25Q14CX7 972 aa15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 ACCSLQ4AC99 568 aa15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 C1orf220Q5T0J3 134 aa15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 TAB3Q8N5C8 712 aaPredicted RBP15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 NT5C1BQ96P26 610 aa15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 RPS6KC1Q96S38 1066 aa15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 ANAPC5Q9UJX4 755 aa15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 TRIM33Q9UPN9 1127 aa15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 TESPA1A2RU30 521 aaPredicted RBP15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 PIK3CDO00329 1044 aa15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 SCP2P22307 547 aa15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 XRCC4Q13426 336 aa15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 WDR78Q5VTH9 848 aa15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 PRCCQ92733 491 aaPredicted RBP15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 KLHL29Q96CT2 875 aa15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 RUNDC3BQ96NL0 473 aa15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 MXRA8Q9BRK3 442 aa15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 PLVAPQ9BX97 442 aa15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 ATRNL1Q5VV63 1379 aa15.44■□□□□ 0.06
SFSWAP-201ENST00000261674 EIF4E1BA6NMX2 242 aaKnown RBP15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 CLNS1AP54105 237 aaKnown RBP15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 GADL1Q6ZQY3 521 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 ZNF365Q70YC5 407 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 CENPTQ96BT3 561 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 STAMBPL1Q96FJ0 436 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 ECT2Q9H8V3 914 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 PNMA3Q9UL41 463 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 CTDP1Q9Y5B0 961 aaPredicted RBP15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 KIF13BQ9NQT8 1826 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 DNAH12Q6ZR08 3092 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 GRIN3BO60391 1043 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 USP2O75604 605 aaPredicted RBP15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 GJB6O95452 261 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 ATP6V1G2O95670 118 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 YWHABP31946 246 aaKnown RBP15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 QARSP47897 775 aaKnown RBP15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 MTM1Q13496 603 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 CLUL1Q15846 466 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 APOBEC3FQ8IUX4 373 aaKnown RBP15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 ART4Q93070 314 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 RPAP3Q9H6T3 665 aaPredicted RBP15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 NOCTQ9UK39 431 aaKnown RBP15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 PCDHA3Q9Y5H8 950 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 DENND3A2RUS2 1198 aa15.43■□□□□ 0.06
SFSWAP-201ENST00000261674 O00370 1275 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms