RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 SGPL1O95470 568 aa24.09■■□□□ 1.45
SIX3-201ENST00000260653 CYP2C9P11712 490 aa24.09■■□□□ 1.45
SIX3-201ENST00000260653 ADAM17P78536 824 aa24.09■■□□□ 1.45
SIX3-201ENST00000260653 ZNF200P98182 395 aaPredicted RBP24.09■■□□□ 1.45
SIX3-201ENST00000260653 AMPD2Q01433 879 aa24.09■■□□□ 1.45
SIX3-201ENST00000260653 ADAMTS10Q9H324 1103 aa24.09■■□□□ 1.45
SIX3-201ENST00000260653 SEPT11Q9NVA2 429 aaKnown RBP24.09■■□□□ 1.45
SIX3-201ENST00000260653 FAM170AA1A519 330 aa24.08■■□□□ 1.45
SIX3-201ENST00000260653 CXCL8P10145 99 aa24.08■■□□□ 1.45
SIX3-201ENST00000260653 SLC47A2Q86VL8 602 aa24.08■■□□□ 1.45
SIX3-201ENST00000260653 EPS8L1Q8TE68 723 aa24.08■■□□□ 1.45
SIX3-201ENST00000260653 AGPAT1Q99943 283 aa24.08■■□□□ 1.45
SIX3-201ENST00000260653 CDC23Q9UJX2 597 aa24.08■■□□□ 1.45
SIX3-201ENST00000260653 PHACTR2O75167 634 aa24.08■■□□□ 1.44
SIX3-201ENST00000260653 ERLIN2O94905 339 aa24.08■■□□□ 1.44
SIX3-201ENST00000260653 TNFAIP3P21580 790 aa24.08■■□□□ 1.44
SIX3-201ENST00000260653 NOX5Q96PH1 765 aa24.08■■□□□ 1.44
SIX3-201ENST00000260653 APOBEC3GQ9HC16 384 aaKnown RBP24.08■■□□□ 1.44
SIX3-201ENST00000260653 SMIM35A0A1B0GVV1 85 aa24.07■■□□□ 1.44
SIX3-201ENST00000260653 TMCO5BA8MYB1 307 aa24.07■■□□□ 1.44
SIX3-201ENST00000260653 TREHO43280 583 aa24.07■■□□□ 1.44
SIX3-201ENST00000260653 GPR32O75388 356 aa24.07■■□□□ 1.44
SIX3-201ENST00000260653 NAP1L1P55209 391 aaKnown RBP24.07■■□□□ 1.44
SIX3-201ENST00000260653 NCOA4Q13772 614 aa24.07■■□□□ 1.44
SIX3-201ENST00000260653 SRGAP1Q7Z6B7 1085 aa24.07■■□□□ 1.44
SIX3-201ENST00000260653 EFCAB13Q8IY85 973 aa24.07■■□□□ 1.44
SIX3-201ENST00000260653 CDHR5Q9HBB8 845 aa24.07■■□□□ 1.44
SIX3-201ENST00000260653 PRDM4Q9UKN5 801 aa24.07■■□□□ 1.44
SIX3-201ENST00000260653 MCF2P10911 925 aa24.07■■□□□ 1.44
SIX3-201ENST00000260653 SP3Q02447 781 aa24.07■■□□□ 1.44
SIX3-201ENST00000260653 NOP9Q86U38 636 aaKnown RBP24.07■■□□□ 1.44
SIX3-201ENST00000260653 RNF10Q8N5U6 811 aaKnown RBP24.07■■□□□ 1.44
SIX3-201ENST00000260653 MNS1Q8NEH6 495 aa24.07■■□□□ 1.44
SIX3-201ENST00000260653 ALS2CR12Q96Q35 445 aa24.07■■□□□ 1.44
SIX3-201ENST00000260653 KATNAL1Q9BW62 490 aa24.07■■□□□ 1.44
SIX3-201ENST00000260653 NOCTQ9UK39 431 aaKnown RBP24.07■■□□□ 1.44
SIX3-201ENST00000260653 PGK1P00558 417 aa24.06■■□□□ 1.44
SIX3-201ENST00000260653 ENOSF1Q7L5Y1 443 aa24.06■■□□□ 1.44
SIX3-201ENST00000260653 DNAJB3Q8WWF6 145 aa24.06■■□□□ 1.44
SIX3-201ENST00000260653 TAS2R14Q9NYV8 317 aa24.06■■□□□ 1.44
SIX3-201ENST00000260653 CASP8AP2Q9UKL3 1982 aa24.06■■□□□ 1.44
SIX3-201ENST00000260653 UMODL1Q5DID0 1318 aa24.06■■□□□ 1.44
SIX3-201ENST00000260653 CLSTN1O94985 981 aa24.06■■□□□ 1.44
SIX3-201ENST00000260653 CST3P01034 146 aaPredicted RBP24.06■■□□□ 1.44
SIX3-201ENST00000260653 STAG3L1P0CL83 205 aa24.06■■□□□ 1.44
SIX3-201ENST00000260653 AP3M2P53677 418 aa24.06■■□□□ 1.44
SIX3-201ENST00000260653 NOP14P78316 857 aaKnown RBP24.06■■□□□ 1.44
SIX3-201ENST00000260653 TFAMQ00059 246 aaKnown RBP24.06■■□□□ 1.44
SIX3-201ENST00000260653 SURF1Q15526 300 aa24.06■■□□□ 1.44
SIX3-201ENST00000260653 GNASQ5JWF2 1037 aa24.06■■□□□ 1.44
SIX3-201ENST00000260653 TAF3Q5VWG9 929 aa24.06■■□□□ 1.44
SIX3-201ENST00000260653 TRAPPC11Q7Z392 1133 aa24.06■■□□□ 1.44
SIX3-201ENST00000260653 RPUSD2Q8IZ73 545 aaKnown RBP24.06■■□□□ 1.44
SIX3-201ENST00000260653 OSMRQ99650 979 aa24.06■■□□□ 1.44
SIX3-201ENST00000260653 RPF1Q9H9Y2 349 aaKnown RBP24.06■■□□□ 1.44
SIX3-201ENST00000260653 CREBZFQ9NS37 354 aa24.06■■□□□ 1.44
SIX3-201ENST00000260653 ANO9A1A5B4 782 aa24.05■■□□□ 1.44
SIX3-201ENST00000260653 MEFVO15553 781 aaPredicted RBP24.05■■□□□ 1.44
SIX3-201ENST00000260653 H2AFZP0C0S5 128 aa24.05■■□□□ 1.44
SIX3-201ENST00000260653 KRT5P13647 590 aa24.05■■□□□ 1.44
SIX3-201ENST00000260653 GJA9P57773 515 aa24.05■■□□□ 1.44
SIX3-201ENST00000260653 CACNB2Q08289 660 aaPredicted RBP24.05■■□□□ 1.44
SIX3-201ENST00000260653 NCBP1Q09161 790 aaKnown RBP24.05■■□□□ 1.44
SIX3-201ENST00000260653 DUOXA2Q1HG44 320 aa24.05■■□□□ 1.44
SIX3-201ENST00000260653 H2AFVQ71UI9 128 aa24.05■■□□□ 1.44
SIX3-201ENST00000260653 RNF186Q9NXI6 227 aa24.05■■□□□ 1.44
SIX3-201ENST00000260653 BRCA2P51587 3418 aa24.05■■□□□ 1.44
SIX3-201ENST00000260653 PAPD7Q5XG87 772 aaKnown RBP24.05■■□□□ 1.44
SIX3-201ENST00000260653 NUB1Q9Y5A7 615 aa24.05■■□□□ 1.44
SIX3-201ENST00000260653 A0A1B0GUA9 196 aa24.04■■□□□ 1.44
SIX3-201ENST00000260653 B4GALT4O60513 344 aa24.04■■□□□ 1.44
SIX3-201ENST00000260653 ELNP15502 786 aa24.04■■□□□ 1.44
SIX3-201ENST00000260653 CHRNB2P17787 502 aa24.04■■□□□ 1.44
SIX3-201ENST00000260653 GALCP54803 685 aa24.04■■□□□ 1.44
SIX3-201ENST00000260653 FAM81BQ96LP2 452 aa24.04■■□□□ 1.44
SIX3-201ENST00000260653 GCOM2Q9BZD3 368 aaPredicted RBP24.04■■□□□ 1.44
SIX3-201ENST00000260653 JRKLQ9Y4A0 524 aa24.04■■□□□ 1.44
SIX3-201ENST00000260653 ATP8B3O60423 1300 aa24.04■■□□□ 1.44
SIX3-201ENST00000260653 C17orf102A2RUQ5 167 aa24.04■■□□□ 1.44
SIX3-201ENST00000260653 BTNL10A8MVZ5 291 aa24.04■■□□□ 1.44
SIX3-201ENST00000260653 TRPA1O75762 1119 aa24.04■■□□□ 1.44
SIX3-201ENST00000260653 CLTAP09496 248 aa24.04■■□□□ 1.44
SIX3-201ENST00000260653 CYP11B1P15538 503 aa24.04■■□□□ 1.44
SIX3-201ENST00000260653 CUL2Q13617 745 aa24.04■■□□□ 1.44
SIX3-201ENST00000260653 C7orf31Q8N865 590 aa24.04■■□□□ 1.44
SIX3-201ENST00000260653 SEPT4O43236 478 aa24.03■■□□□ 1.44
SIX3-201ENST00000260653 CALCAP01258 141 aa24.03■■□□□ 1.44
SIX3-201ENST00000260653 TMEM191BP0C7N4 346 aa24.03■■□□□ 1.44
SIX3-201ENST00000260653 SAR1BQ9Y6B6 198 aa24.03■■□□□ 1.44
SIX3-201ENST00000260653 SRGAP2O75044 1071 aa24.03■■□□□ 1.44
SIX3-201ENST00000260653 TADA3O75528 432 aa24.03■■□□□ 1.44
SIX3-201ENST00000260653 PALMO75781 387 aa24.03■■□□□ 1.44
SIX3-201ENST00000260653 PDE6CP51160 858 aa24.03■■□□□ 1.44
SIX3-201ENST00000260653 MYL6P60660 151 aa24.03■■□□□ 1.44
SIX3-201ENST00000260653 TUBB2AQ13885 445 aa24.03■■□□□ 1.44
SIX3-201ENST00000260653 CXCL17Q6UXB2 119 aa24.03■■□□□ 1.44
SIX3-201ENST00000260653 PCDHB18PQ96TA0 734 aa24.03■■□□□ 1.44
SIX3-201ENST00000260653 TUBB2BQ9BVA1 445 aa24.03■■□□□ 1.44
SIX3-201ENST00000260653 IMPG2Q9BZV3 1241 aa24.03■■□□□ 1.44
SIX3-201ENST00000260653 INTUQ9ULD6 942 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms