RNA–Protein interactions for RNA: ENST00000258962.4

SRSF1-201, Transcript of serine and arginine rich splicing factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF1, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-201ENST00000258962 IFIH1Q9BYX4 1025 aaKnown RBP18.9■□□□□ 0.62
SRSF1-201ENST00000258962 TMEM117Q9H0C3 514 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 MINDY3Q9H8M7 445 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 IFT122Q9HBG6 1241 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 KIAA1586Q9HCI6 787 aa18.9■□□□□ 0.62
SRSF1-201ENST00000258962 REXO2Q9Y3B8 237 aaKnown RBP18.9■□□□□ 0.62
SRSF1-201ENST00000258962 ANK1P16157 1881 aa18.89■□□□□ 0.61
SRSF1-201ENST00000258962 ZNF233A6NK53 670 aa18.89■□□□□ 0.61
SRSF1-201ENST00000258962 PMM2O15305 246 aa18.89■□□□□ 0.61
SRSF1-201ENST00000258962 P4HA2O15460 535 aa18.89■□□□□ 0.61
SRSF1-201ENST00000258962 NDUFA10O95299 355 aa18.89■□□□□ 0.61
SRSF1-201ENST00000258962 WNT7BP56706 349 aa18.89■□□□□ 0.61
SRSF1-201ENST00000258962 FBXO47Q5MNV8 452 aa18.89■□□□□ 0.61
SRSF1-201ENST00000258962 ZBTB41Q5SVQ8 909 aa18.89■□□□□ 0.61
SRSF1-201ENST00000258962 IQCEQ6IPM2 695 aa18.89■□□□□ 0.61
SRSF1-201ENST00000258962 GPR153Q6NV75 609 aa18.89■□□□□ 0.61
SRSF1-201ENST00000258962 POP1Q99575 1024 aaKnown RBP18.89■□□□□ 0.61
SRSF1-201ENST00000258962 NUCKS1Q9H1E3 243 aaKnown RBP18.89■□□□□ 0.61
SRSF1-201ENST00000258962 NHEJ1Q9H9Q4 299 aaPredicted RBP18.89■□□□□ 0.61
SRSF1-201ENST00000258962 TOPORSQ9NS56 1045 aaPredicted RBP18.89■□□□□ 0.61
SRSF1-201ENST00000258962 EPN1Q9Y6I3 576 aaPredicted RBP18.89■□□□□ 0.61
SRSF1-201ENST00000258962 SQORQ9Y6N5 450 aa18.89■□□□□ 0.61
SRSF1-201ENST00000258962 A0A087WZ62 844 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 A0A0U1RQJ8 604 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 INO80B-WBP1J3KQ70 363 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 KIF2AO00139 706 aaPredicted RBP18.88■□□□□ 0.61
SRSF1-201ENST00000258962 ACKR2O00590 384 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 B4GALT5O43286 388 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 FAM189A1O60320 539 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 TOM1L1O75674 476 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 PROZP22891 400 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 PHKA2P46019 1235 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 ACOT2P49753 483 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 MXI1P50539 228 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 TERF1P54274 439 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 JAM2P57087 298 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 LPIN1Q14693 890 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 PTPN14Q15678 1187 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 SFMBT2Q5VUG0 894 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 HGSNATQ68CP4 663 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 FAM109BQ6ICB4 259 aaPredicted RBP18.88■□□□□ 0.61
SRSF1-201ENST00000258962 TSHZ1Q6ZSZ6 1077 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 EHBP1Q8NDI1 1231 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 PHOSPHO2Q8TCD6 241 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 ATRIPQ8WXE1 791 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 PPP1R16BQ96T49 567 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 SLC9A7Q96T83 725 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 FDXACB1Q9BRP7 624 aaPredicted RBP18.88■□□□□ 0.61
SRSF1-201ENST00000258962 INO80BQ9C086 356 aaPredicted RBP18.88■□□□□ 0.61
SRSF1-201ENST00000258962 MSRAQ9UJ68 235 aa18.88■□□□□ 0.61
SRSF1-201ENST00000258962 GRXCR1A8MXD5 290 aa18.87■□□□□ 0.61
SRSF1-201ENST00000258962 LRRN2O75325 713 aa18.87■□□□□ 0.61
SRSF1-201ENST00000258962 TNNT1P13805 278 aa18.87■□□□□ 0.61
SRSF1-201ENST00000258962 MATR3P43243 847 aaKnown RBP eCLIP18.87■□□□□ 0.61
SRSF1-201ENST00000258962 WDR5P61964 334 aaKnown RBP18.87■□□□□ 0.61
SRSF1-201ENST00000258962 CDC42EP1Q00587 391 aa18.87■□□□□ 0.61
SRSF1-201ENST00000258962 RAPGEF1Q13905 1077 aa18.87■□□□□ 0.61
SRSF1-201ENST00000258962 PSMD6Q15008 389 aa18.87■□□□□ 0.61
SRSF1-201ENST00000258962 KIZQ2M2Z5 673 aa18.87■□□□□ 0.61
SRSF1-201ENST00000258962 CCDC170Q8IYT3 715 aa18.87■□□□□ 0.61
SRSF1-201ENST00000258962 SCLT1Q96NL6 688 aa18.87■□□□□ 0.61
SRSF1-201ENST00000258962 OSBPL7Q9BZF2 842 aa18.87■□□□□ 0.61
SRSF1-201ENST00000258962 PTPRHQ9HD43 1115 aa18.87■□□□□ 0.61
SRSF1-201ENST00000258962 AIPL1Q9NZN9 384 aa18.87■□□□□ 0.61
SRSF1-201ENST00000258962 CLDN3O15551 220 aa18.86■□□□□ 0.61
SRSF1-201ENST00000258962 LDHAP00338 332 aaKnown RBP18.86■□□□□ 0.61
SRSF1-201ENST00000258962 GTF2H1P32780 548 aa18.86■□□□□ 0.61
SRSF1-201ENST00000258962 GPC3P51654 580 aa18.86■□□□□ 0.61
SRSF1-201ENST00000258962 CRYBB1P53674 252 aaPredicted RBP18.86■□□□□ 0.61
SRSF1-201ENST00000258962 CLDN10P78369 228 aa18.86■□□□□ 0.61
SRSF1-201ENST00000258962 PRPF4BQ13523 1007 aaKnown RBP18.86■□□□□ 0.61
SRSF1-201ENST00000258962 RAB30Q15771 203 aa18.86■□□□□ 0.61
SRSF1-201ENST00000258962 AMHR2Q16671 573 aa18.86■□□□□ 0.61
SRSF1-201ENST00000258962 FAM187BQ17R55 369 aa18.86■□□□□ 0.61
SRSF1-201ENST00000258962 TCTN1Q2MV58 587 aa18.86■□□□□ 0.61
SRSF1-201ENST00000258962 ZBTB33Q86T24 672 aa18.86■□□□□ 0.61
SRSF1-201ENST00000258962 ZBED2Q9BTP6 218 aa18.86■□□□□ 0.61
SRSF1-201ENST00000258962 TMEM8AQ9HCN3 771 aa18.86■□□□□ 0.61
SRSF1-201ENST00000258962 APEX2Q9UBZ4 518 aa18.86■□□□□ 0.61
SRSF1-201ENST00000258962 MYO6Q9UM54 1294 aa18.86■□□□□ 0.61
SRSF1-201ENST00000258962 EIF3CLB5ME19 914 aaKnown RBP18.85■□□□□ 0.61
SRSF1-201ENST00000258962 AMHP03971 560 aa18.85■□□□□ 0.61
SRSF1-201ENST00000258962 HARSP12081 509 aaKnown RBP18.85■□□□□ 0.61
SRSF1-201ENST00000258962 CD52P31358 61 aa18.85■□□□□ 0.61
SRSF1-201ENST00000258962 CYLC1P35663 651 aaPredicted RBP18.85■□□□□ 0.61
SRSF1-201ENST00000258962 EIF4A3P38919 411 aaKnown RBP18.85■□□□□ 0.61
SRSF1-201ENST00000258962 MCL1Q07820 350 aa18.85■□□□□ 0.61
SRSF1-201ENST00000258962 PAK2Q13177 524 aa18.85■□□□□ 0.61
SRSF1-201ENST00000258962 SEZ6Q53EL9 994 aa18.85■□□□□ 0.61
SRSF1-201ENST00000258962 ATF7IP2Q5U623 682 aa18.85■□□□□ 0.61
SRSF1-201ENST00000258962 KRT39Q6A163 491 aa18.85■□□□□ 0.61
SRSF1-201ENST00000258962 PHLDB3Q6NSJ2 640 aa18.85■□□□□ 0.61
SRSF1-201ENST00000258962 MPZL3Q6UWV2 235 aa18.85■□□□□ 0.61
SRSF1-201ENST00000258962 ZNF516Q92618 1163 aa18.85■□□□□ 0.61
SRSF1-201ENST00000258962 SEMA4DQ92854 862 aa18.85■□□□□ 0.61
SRSF1-201ENST00000258962 FAM84AQ96KN4 292 aa18.85■□□□□ 0.61
SRSF1-201ENST00000258962 EIF3CQ99613 913 aaKnown RBP18.85■□□□□ 0.61
SRSF1-201ENST00000258962 CDHR5Q9HBB8 845 aa18.85■□□□□ 0.61
SRSF1-201ENST00000258962 PRMT7Q9NVM4 692 aaPredicted RBP18.85■□□□□ 0.61
SRSF1-201ENST00000258962 RBAKQ9NYW8 714 aaPredicted RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms