RNA–Protein interactions for RNA: ENST00000258781.10

CCM2-201, Transcript of CCM2 scaffold protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CCM2, Length 1,894 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-201ENST00000258781 HOXD10P28358 340 aa29.77■■■□□ 2.36
CCM2-201ENST00000258781 PHKA2P46019 1235 aa29.77■■■□□ 2.36
CCM2-201ENST00000258781 MBTD1Q05BQ5 628 aa29.77■■■□□ 2.36
CCM2-201ENST00000258781 BIRC3Q13489 604 aa29.77■■■□□ 2.36
CCM2-201ENST00000258781 MPZL3Q6UWV2 235 aa29.77■■■□□ 2.36
CCM2-201ENST00000258781 DNAAF5Q86Y56 855 aa29.77■■■□□ 2.36
CCM2-201ENST00000258781 IFNLR1Q8IU57 520 aaPredicted RBP29.77■■■□□ 2.36
CCM2-201ENST00000258781 RPUSD2Q8IZ73 545 aaKnown RBP29.77■■■□□ 2.36
CCM2-201ENST00000258781 LRRC57Q8N9N7 239 aa29.77■■■□□ 2.36
CCM2-201ENST00000258781 TPCN2Q8NHX9 752 aa29.77■■■□□ 2.36
CCM2-201ENST00000258781 CTNNBL1Q8WYA6 563 aaPredicted RBP29.77■■■□□ 2.36
CCM2-201ENST00000258781 RFFLQ8WZ73 363 aa29.77■■■□□ 2.36
CCM2-201ENST00000258781 PARD6BQ9BYG5 372 aa29.77■■■□□ 2.36
CCM2-201ENST00000258781 KAT6AQ92794 2004 aa29.77■■■□□ 2.36
CCM2-201ENST00000258781 ANKRD62A6NC57 917 aa29.76■■■□□ 2.36
CCM2-201ENST00000258781 GJB1P08034 283 aa29.76■■■□□ 2.36
CCM2-201ENST00000258781 ITIH3Q06033 890 aa29.76■■■□□ 2.36
CCM2-201ENST00000258781 SURF1Q15526 300 aa29.76■■■□□ 2.36
CCM2-201ENST00000258781 ZBTB33Q86T24 672 aa29.76■■■□□ 2.36
CCM2-201ENST00000258781 NOP9Q86U38 636 aaKnown RBP29.76■■■□□ 2.36
CCM2-201ENST00000258781 COG1Q8WTW3 980 aa29.76■■■□□ 2.36
CCM2-201ENST00000258781 ZBTB10Q96DT7 871 aa29.76■■■□□ 2.36
CCM2-201ENST00000258781 PI4K2AQ9BTU6 479 aa29.76■■■□□ 2.36
CCM2-201ENST00000258781 EPC1Q9H2F5 836 aa29.76■■■□□ 2.36
CCM2-201ENST00000258781 ANKZF1Q9H8Y5 726 aa29.76■■■□□ 2.36
CCM2-201ENST00000258781 PTPRHQ9HD43 1115 aa29.76■■■□□ 2.36
CCM2-201ENST00000258781 Q9Y3F1 56 aa29.76■■■□□ 2.36
CCM2-201ENST00000258781 INO80B-WBP1J3KQ70 363 aa29.76■■■□□ 2.35
CCM2-201ENST00000258781 VNN1O95497 513 aa29.76■■■□□ 2.35
CCM2-201ENST00000258781 FTCDO95954 541 aa29.76■■■□□ 2.35
CCM2-201ENST00000258781 CLCN6P51797 869 aa29.76■■■□□ 2.35
CCM2-201ENST00000258781 BEX3Q00994 111 aa29.76■■■□□ 2.35
CCM2-201ENST00000258781 ATF7IP2Q5U623 682 aa29.76■■■□□ 2.35
CCM2-201ENST00000258781 WDR49Q8IV35 697 aa29.76■■■□□ 2.35
CCM2-201ENST00000258781 NOA1Q8NC60 698 aaKnown RBP29.76■■■□□ 2.35
CCM2-201ENST00000258781 INO80BQ9C086 356 aaPredicted RBP29.76■■■□□ 2.35
CCM2-201ENST00000258781 ISCUQ9H1K1 167 aa29.76■■■□□ 2.35
CCM2-201ENST00000258781 PRMT7Q9NVM4 692 aaPredicted RBP29.76■■■□□ 2.35
CCM2-201ENST00000258781 RNF14Q9UBS8 474 aa29.76■■■□□ 2.35
CCM2-201ENST00000258781 PDE2AO00408 941 aaPredicted RBP29.75■■■□□ 2.35
CCM2-201ENST00000258781 PRKAR2AP13861 404 aaKnown RBP29.75■■■□□ 2.35
CCM2-201ENST00000258781 CHRNB2P17787 502 aa29.75■■■□□ 2.35
CCM2-201ENST00000258781 TMOD1P28289 359 aa29.75■■■□□ 2.35
CCM2-201ENST00000258781 FAM187BQ17R55 369 aa29.75■■■□□ 2.35
CCM2-201ENST00000258781 PALB2Q86YC2 1186 aa29.75■■■□□ 2.35
CCM2-201ENST00000258781 CPSF3Q9UKF6 684 aaKnown RBP29.75■■■□□ 2.35
CCM2-201ENST00000258781 TMCO5BA8MYB1 307 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 GZMAP12544 262 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 CCND3P30281 292 aaPredicted RBP29.74■■■□□ 2.35
CCM2-201ENST00000258781 PDE6CP51160 858 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 SLFN11Q7Z7L1 901 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 SYCE1Q8N0S2 351 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 FAM84AQ96KN4 292 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 TAS2R14Q9NYV8 317 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 TNFSF13BQ9Y275 285 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 ANK1P16157 1881 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 MYADML2A6NDP7 307 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 DUSP11O75319 330 aaKnown RBP29.74■■■□□ 2.35
CCM2-201ENST00000258781 GNRH1P01148 92 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 TUBBP07437 444 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 CYP11B1P15538 503 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 TNFSF9P41273 254 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 MTHFD1LQ6UB35 978 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 SLC47A2Q86VL8 602 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 RAET1EQ8TD07 263 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 KAT2BQ92831 832 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 CALR3Q96L12 384 aaKnown RBP29.74■■■□□ 2.35
CCM2-201ENST00000258781 AP5M1Q9H0R1 490 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 IFT122Q9HBG6 1241 aa29.74■■■□□ 2.35
CCM2-201ENST00000258781 SEPT4O43236 478 aa29.73■■■□□ 2.35
CCM2-201ENST00000258781 RTN2O75298 545 aa29.73■■■□□ 2.35
CCM2-201ENST00000258781 CPT1AP50416 773 aa29.73■■■□□ 2.35
CCM2-201ENST00000258781 CDR2Q01850 454 aa29.73■■■□□ 2.35
CCM2-201ENST00000258781 SEZ6Q53EL9 994 aa29.73■■■□□ 2.35
CCM2-201ENST00000258781 DHX38Q92620 1227 aaKnown RBP29.73■■■□□ 2.35
CCM2-201ENST00000258781 F2P00734 622 aa29.72■■■□□ 2.35
CCM2-201ENST00000258781 PPFIA1Q13136 1202 aa29.72■■■□□ 2.35
CCM2-201ENST00000258781 TCEAL1Q15170 157 aa29.72■■■□□ 2.35
CCM2-201ENST00000258781 ZNF568Q3ZCX4 644 aa29.72■■■□□ 2.35
CCM2-201ENST00000258781 OR5B17Q8NGF7 314 aa29.72■■■□□ 2.35
CCM2-201ENST00000258781 MINDY3Q9H8M7 445 aa29.72■■■□□ 2.35
CCM2-201ENST00000258781 RAB21Q9UL25 225 aa29.72■■■□□ 2.35
CCM2-201ENST00000258781 CES2O00748 559 aa29.72■■■□□ 2.35
CCM2-201ENST00000258781 HMGCRP04035 888 aa29.72■■■□□ 2.35
CCM2-201ENST00000258781 FMO1Q01740 532 aa29.72■■■□□ 2.35
CCM2-201ENST00000258781 BRD3Q15059 726 aa29.72■■■□□ 2.35
CCM2-201ENST00000258781 FSCN1Q16658 493 aaKnown RBP29.72■■■□□ 2.35
CCM2-201ENST00000258781 CCDC181Q5TID7 509 aa29.72■■■□□ 2.35
CCM2-201ENST00000258781 AKT3Q9Y243 479 aa29.72■■■□□ 2.35
CCM2-201ENST00000258781 PAFAH1B1P43034 410 aa29.71■■■□□ 2.35
CCM2-201ENST00000258781 HADHBP55084 474 aaKnown RBP29.71■■■□□ 2.35
CCM2-201ENST00000258781 C1QTNF8P60827 252 aa29.71■■■□□ 2.35
CCM2-201ENST00000258781 RPS6KA1Q15418 735 aa29.71■■■□□ 2.35
CCM2-201ENST00000258781 GRIK4Q16099 956 aa29.71■■■□□ 2.35
CCM2-201ENST00000258781 SLC35G2Q8TBE7 412 aa29.71■■■□□ 2.35
CCM2-201ENST00000258781 PPP1R13LQ8WUF5 828 aa29.71■■■□□ 2.35
CCM2-201ENST00000258781 ZNF668Q96K58 619 aaPredicted RBP29.71■■■□□ 2.35
CCM2-201ENST00000258781 PCDHB18PQ96TA0 734 aa29.71■■■□□ 2.35
CCM2-201ENST00000258781 B4GALT5O43286 388 aa29.7■■■□□ 2.35
CCM2-201ENST00000258781 PHACTR2O75167 634 aa29.7■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms