RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 PIH1D1Q9NWS0 290 aaKnown RBP9.74□□□□□ -0.85
CKAP2-201ENST00000258607 AIPL1Q9NZN9 384 aa9.74□□□□□ -0.85
CKAP2-201ENST00000258607 FBXL5Q9UKA1 691 aa9.74□□□□□ -0.85
CKAP2-201ENST00000258607 PLAAQ9Y263 795 aa9.74□□□□□ -0.85
CKAP2-201ENST00000258607 TIMM13Q9Y5L4 95 aaPredicted RBP9.74□□□□□ -0.85
CKAP2-201ENST00000258607 GOLGA6L10A6NI86 522 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 C19orf81C9J6K1 198 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 FARP2O94887 1054 aaPredicted RBP9.73□□□□□ -0.85
CKAP2-201ENST00000258607 NPTXRO95502 500 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 ITGB3P05106 788 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 ZSCAN5DPP0CG00 497 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 SFNP31947 248 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 GCLCP48506 637 aaPredicted RBP9.73□□□□□ -0.85
CKAP2-201ENST00000258607 GNGT1P63211 74 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 CYP24A1Q07973 514 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 LAMTOR4Q0VGL1 99 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 FKBP1CQ5VVH2 108 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 DENND2CQ68D51 928 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 HSPH1Q92598 858 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 CALN1Q9BXU9 219 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 PARP2Q9UGN5 583 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 LRRD1A4D1F6 860 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 DCDC2CA8MYV0 355 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 ERLIN2O94905 339 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 GJA5P36382 358 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 CCT5P48643 541 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 CCL14Q16627 93 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 C10orf76Q5T2E6 689 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 RNF187Q5TA31 235 aaPredicted RBP9.73□□□□□ -0.85
CKAP2-201ENST00000258607 SEL1L2Q5TEA6 688 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 LBX2Q6XYB7 198 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 ARMCX2Q7L311 632 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 IFT20Q8IY31 132 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 USP38Q8NB14 1042 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 RBBP8NLQ8NC74 664 aaPredicted RBP9.73□□□□□ -0.85
CKAP2-201ENST00000258607 MCPH1Q8NEM0 835 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 AFAP1L1Q8TED9 768 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 ZBED3Q96IU2 234 aaPredicted RBP9.73□□□□□ -0.85
CKAP2-201ENST00000258607 TSPYL1Q9H0U9 437 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 ACBD3Q9H3P7 528 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 HPCAL4Q9UM19 191 aa9.73□□□□□ -0.85
CKAP2-201ENST00000258607 EIF3DO15371 548 aaKnown RBP eCLIP9.72□□□□□ -0.85
CKAP2-201ENST00000258607 NPM3O75607 178 aaKnown RBP9.72□□□□□ -0.85
CKAP2-201ENST00000258607 TUBB4AP04350 444 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 ETS1P14921 441 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 ZSCAN26Q16670 478 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 FIGNQ5HY92 759 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 MEI1Q5TIA1 1274 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 ABHD15Q6UXT9 468 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 RFFLQ8WZ73 363 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 KIFAP3Q92845 792 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 PKNOX2Q96KN3 472 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 PCYT2Q99447 389 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 APOBEC3GQ9HC16 384 aaKnown RBP9.72□□□□□ -0.85
CKAP2-201ENST00000258607 GPATCH2LQ9NWQ4 482 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 SEL1LQ9UBV2 794 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 HMGXB4Q9UGU5 601 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 NRXN2Q9P2S2 1712 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 WDR87Q6ZQQ6 2873 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 MYO18AQ92614 2054 aaKnown RBP9.72□□□□□ -0.85
CKAP2-201ENST00000258607 TRIM66O15016 1216 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 BANF1O75531 89 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 GPC5P78333 572 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 NNTQ13423 1086 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 PPP2R5DQ14738 602 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 ZNF699Q32M78 642 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 MCTP2Q6DN12 878 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 ARMC9Q7Z3E5 817 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 CTU1Q7Z7A3 348 aaKnown RBP9.72□□□□□ -0.85
CKAP2-201ENST00000258607 ERO1BQ86YB8 467 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 ZBTB8OSQ8IWT0 167 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 FBXO41Q8TF61 875 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 NDRG1Q92597 394 aaKnown RBP9.72□□□□□ -0.85
CKAP2-201ENST00000258607 C9orf72Q96LT7 481 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 HEXIM2Q96MH2 286 aaKnown RBP9.72□□□□□ -0.85
CKAP2-201ENST00000258607 LBHD1Q9BQE6 289 aaPredicted RBP9.72□□□□□ -0.85
CKAP2-201ENST00000258607 NUCKS1Q9H1E3 243 aaKnown RBP9.72□□□□□ -0.85
CKAP2-201ENST00000258607 ABT1Q9ULW3 272 aaKnown RBP9.72□□□□□ -0.85
CKAP2-201ENST00000258607 NOVA2Q9UNW9 492 aaKnown RBP9.72□□□□□ -0.85
CKAP2-201ENST00000258607 MAST2Q6P0Q8 1798 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 TLR3O15455 904 aaKnown RBP9.72□□□□□ -0.85
CKAP2-201ENST00000258607 MYL3P08590 195 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 NFICP08651 508 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 RARBP10826 455 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 YARSP54577 528 aaKnown RBP9.72□□□□□ -0.85
CKAP2-201ENST00000258607 DR1Q01658 176 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 DMTNQ08495 405 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 ZKSCAN8Q15776 578 aaPredicted RBP9.72□□□□□ -0.85
CKAP2-201ENST00000258607 RAB6CQ53S08 254 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 SGO2Q562F6 1265 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 DCAF12L1Q5VU92 463 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 TXNRD3NBQ6F5E7 133 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 NT5DC3Q86UY8 548 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 FAM76AQ8TAV0 307 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 FBXO25Q8TCJ0 367 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 GPR88Q9GZN0 384 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 RAB6CQ9H0N0 254 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 KCNK9Q9NPC2 374 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 AGTPBP1Q9UPW5 1226 aa9.72□□□□□ -0.85
CKAP2-201ENST00000258607 INPP5FQ9Y2H2 1132 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms