RNA–Protein interactions for RNA: ENST00000258499.7

USP44-201, Transcript of ubiquitin specific peptidase 44, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP44, Length 4,022 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-201ENST00000258499 IL31RAQ8NI17 732 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 JDP2Q8WYK2 163 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 PRCCQ92733 491 aaPredicted RBP5.04□□□□□ -1.6
USP44-201ENST00000258499 CNKSR1Q969H4 720 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 TMEM143Q96AN5 459 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 LRRC37BQ96QE4 947 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 TAAR1Q96RJ0 339 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 RPS6KC1Q96S38 1066 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 MSTO1Q9BUK6 570 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 TRAIPQ9BWF2 469 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 LRRC4CQ9HCJ2 640 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 GINM1Q9NU53 330 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 WRAP73Q9P2S5 460 aaPredicted RBP5.04□□□□□ -1.6
USP44-201ENST00000258499 PCSK1NQ9UHG2 260 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 TAF1P21675 1872 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 AFF2P51816 1311 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 FRMPD4Q14CM0 1322 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 SLC26A4O43511 780 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 VCAM1P19320 739 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 ITIH2P19823 946 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 CHKAP35790 457 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 NPTX2P47972 431 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 KCNJ2P63252 427 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 PDIA2Q13087 525 aaKnown RBP5.04□□□□□ -1.6
USP44-201ENST00000258499 AUHQ13825 339 aaKnown RBP5.04□□□□□ -1.6
USP44-201ENST00000258499 SPARCL1Q14515 664 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 PLCB4Q15147 1175 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 ZRSR2Q15696 482 aaKnown RBP5.04□□□□□ -1.6
USP44-201ENST00000258499 SMAD1Q15797 465 aaKnown RBP5.04□□□□□ -1.6
USP44-201ENST00000258499 BMT2Q1RMZ1 405 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 BSPRYQ5W0U4 402 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 SCYL2Q6P3W7 929 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 SH3BP5LQ7L8J4 393 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 KRT27Q7Z3Y8 459 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 RHOT1Q8IXI2 618 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 PYROXD1Q8WU10 500 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 SLC7A3Q8WY07 619 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 STMN2Q93045 179 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 MKL1Q969V6 931 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 PGM2Q96G03 612 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 RAB3IPQ96QF0 476 aaPredicted RBP5.04□□□□□ -1.6
USP44-201ENST00000258499 RIT2Q99578 217 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 TBC1D22BQ9NU19 505 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 HERC5Q9UII4 1024 aaKnown RBP5.04□□□□□ -1.6
USP44-201ENST00000258499 H0YGN5 161 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 STAM2O75886 525 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 GH1P01241 217 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 ADRB2P07550 413 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 PDHA1P08559 390 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 SRGAP2CP0DJJ0 459 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 ITGB5P18084 799 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 MARK3P27448 753 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 ECHS1P30084 290 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 HOXA10P31260 410 aaPredicted RBP5.04□□□□□ -1.6
USP44-201ENST00000258499 FNTAP49354 379 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 SPP2Q13103 211 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 PPP2R5CQ13362 524 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 BAATQ14032 418 aaPredicted RBP5.04□□□□□ -1.6
USP44-201ENST00000258499 RCN2Q14257 317 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 SPRED3Q2MJR0 410 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 MUM1Q2TAK8 710 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 SMTNL2Q2TAL5 461 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 TKFCQ3LXA3 575 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 ACAD10Q6JQN1 1059 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 C11orf63Q6NUN7 778 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 RFX8Q6ZV50 586 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 SLFN11Q7Z7L1 901 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 EXOC3L1Q86VI1 746 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 GPD1LQ8N335 351 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 SLC17A8Q8NDX2 589 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 GMCL1P1Q8NEA9 526 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 TTC17Q96AE7 1141 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 TRIM11Q96F44 468 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 PPP1R16BQ96T49 567 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 POLR3FQ9H1D9 316 aaPredicted RBP5.04□□□□□ -1.6
USP44-201ENST00000258499 TRABDQ9H4I3 376 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 TMEM8AQ9HCN3 771 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 KCND2Q9NZV8 630 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 FEM1BQ9UK73 627 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 TRPC5Q9UL62 973 aaPredicted RBP5.04□□□□□ -1.6
USP44-201ENST00000258499 TBX20Q9UMR3 447 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 TRIM33Q9UPN9 1127 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 NFS1Q9Y697 457 aa5.04□□□□□ -1.6
USP44-201ENST00000258499 TIAM2Q8IVF5 1701 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP5.03□□□□□ -1.6
USP44-201ENST00000258499 CFAP73A6NFT4 308 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 DKC1O60832 514 aaKnown RBP eCLIP5.03□□□□□ -1.6
USP44-201ENST00000258499 ANP32DO95626 131 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 ATP6V1G2O95670 118 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 TTC4O95801 387 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 HLA-DRAP01903 254 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 TMEM191BP0C7N4 346 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 ZSCAN5DPP0CG00 497 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 GZMAP12544 262 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 TARSP26639 723 aaKnown RBP5.03□□□□□ -1.6
USP44-201ENST00000258499 MAGEA4P43358 317 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 RASSF2P50749 326 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 NOP14P78316 857 aaKnown RBP5.03□□□□□ -1.6
USP44-201ENST00000258499 IRX4P78413 519 aa5.03□□□□□ -1.6
USP44-201ENST00000258499 ELF3P78545 371 aaPredicted RBP5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms