RNA–Protein interactions for RNA: ENST00000254816.5

TRIM47-201, Transcript of tripartite motif containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM47, Length 2,266 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-201ENST00000254816 ADAMTS10Q9H324 1103 aa20.37■□□□□ 0.85
TRIM47-201ENST00000254816 ACP6Q9NPH0 428 aa20.37■□□□□ 0.85
TRIM47-201ENST00000254816 ARGLU1Q9NWB6 273 aaPredicted RBP20.37■□□□□ 0.85
TRIM47-201ENST00000254816 TRIP11Q15643 1979 aa20.37■□□□□ 0.85
TRIM47-201ENST00000254816 SMIM35A0A1B0GVV1 85 aa20.36■□□□□ 0.85
TRIM47-201ENST00000254816 GPR32O75388 356 aa20.36■□□□□ 0.85
TRIM47-201ENST00000254816 MFAP3P55082 362 aa20.36■□□□□ 0.85
TRIM47-201ENST00000254816 GJA9P57773 515 aa20.36■□□□□ 0.85
TRIM47-201ENST00000254816 ZNF410Q86VK4 478 aa20.36■□□□□ 0.85
TRIM47-201ENST00000254816 GLYCTKQ8IVS8 523 aa20.36■□□□□ 0.85
TRIM47-201ENST00000254816 SLC20A1Q8WUM9 679 aa20.36■□□□□ 0.85
TRIM47-201ENST00000254816 GOLGA1Q92805 767 aa20.36■□□□□ 0.85
TRIM47-201ENST00000254816 OSMRQ99650 979 aa20.36■□□□□ 0.85
TRIM47-201ENST00000254816 MTMR12Q9C0I1 747 aa20.36■□□□□ 0.85
TRIM47-201ENST00000254816 MYO1AQ9UBC5 1043 aa20.36■□□□□ 0.85
TRIM47-201ENST00000254816 NAGPAQ9UK23 515 aa20.36■□□□□ 0.85
TRIM47-201ENST00000254816 PJA2O43164 708 aa20.36■□□□□ 0.85
TRIM47-201ENST00000254816 ERLIN2O94905 339 aa20.36■□□□□ 0.85
TRIM47-201ENST00000254816 MOCS3O95396 460 aa20.36■□□□□ 0.85
TRIM47-201ENST00000254816 MYCNP04198 464 aaPredicted RBP20.36■□□□□ 0.85
TRIM47-201ENST00000254816 CXCL8P10145 99 aa20.36■□□□□ 0.85
TRIM47-201ENST00000254816 SECISBP2LQ93073 1101 aaKnown RBP20.36■□□□□ 0.85
TRIM47-201ENST00000254816 KATNAL1Q9BW62 490 aa20.36■□□□□ 0.85
TRIM47-201ENST00000254816 FAM53CQ9NYF3 392 aa20.36■□□□□ 0.85
TRIM47-201ENST00000254816 CDC23Q9UJX2 597 aa20.36■□□□□ 0.85
TRIM47-201ENST00000254816 BRCA2P51587 3418 aa20.35■□□□□ 0.85
TRIM47-201ENST00000254816 CITO14578 2027 aa20.35■□□□□ 0.85
TRIM47-201ENST00000254816 PHACTR2O75167 634 aa20.35■□□□□ 0.85
TRIM47-201ENST00000254816 CLSTN1O94985 981 aa20.35■□□□□ 0.85
TRIM47-201ENST00000254816 ALKBH5Q6P6C2 394 aaKnown RBP20.35■□□□□ 0.85
TRIM47-201ENST00000254816 TMCO3Q6UWJ1 677 aa20.35■□□□□ 0.85
TRIM47-201ENST00000254816 CXCL17Q6UXB2 119 aa20.35■□□□□ 0.85
TRIM47-201ENST00000254816 C7orf31Q8N865 590 aa20.35■□□□□ 0.85
TRIM47-201ENST00000254816 U2AF1L4Q8WU68 220 aaKnown RBP20.35■□□□□ 0.85
TRIM47-201ENST00000254816 ST7Q9NRC1 585 aa20.35■□□□□ 0.85
TRIM47-201ENST00000254816 CAPN6Q9Y6Q1 641 aa20.35■□□□□ 0.85
TRIM47-201ENST00000254816 SCN10AQ9Y5Y9 1956 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 C17orf102A2RUQ5 167 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 ENC1O14682 589 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 CYP26A1O43174 497 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 SEPT4O43236 478 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 BUB1O43683 1085 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 SGPL1O95470 568 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 CST3P01034 146 aaPredicted RBP20.34■□□□□ 0.85
TRIM47-201ENST00000254816 SRGAP1Q7Z6B7 1085 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 VPS36Q86VN1 386 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 WDR49Q8IV35 697 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 EFCAB13Q8IY85 973 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 REM2Q8IYK8 340 aaPredicted RBP20.34■□□□□ 0.85
TRIM47-201ENST00000254816 TMEM130Q8N3G9 435 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 GPR161Q8N6U8 529 aaKnown RBP20.34■□□□□ 0.85
TRIM47-201ENST00000254816 ZNF784Q8NCA9 323 aaPredicted RBP20.34■□□□□ 0.85
TRIM47-201ENST00000254816 SHC3Q92529 594 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 NAPGQ99747 312 aaPredicted RBP20.34■□□□□ 0.85
TRIM47-201ENST00000254816 SYT11Q9BT88 431 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 C1orf112Q9NSG2 853 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 SEPT11Q9NVA2 429 aaKnown RBP20.34■□□□□ 0.85
TRIM47-201ENST00000254816 TMCO5BA8MYB1 307 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 CCDC172P0C7W6 258 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 RARBP10826 455 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 PRKAR2AP13861 404 aaKnown RBP20.34■□□□□ 0.85
TRIM47-201ENST00000254816 VEGFBP49765 207 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 BMS1Q14692 1282 aaKnown RBP20.34■□□□□ 0.85
TRIM47-201ENST00000254816 NAB2Q15742 525 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 WDR44Q5JSH3 913 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 FAM71AQ8IYT1 594 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 SLC30A5Q8TAD4 765 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 RPF1Q9H9Y2 349 aaKnown RBP20.34■□□□□ 0.85
TRIM47-201ENST00000254816 APOBEC3GQ9HC16 384 aaKnown RBP20.34■□□□□ 0.85
TRIM47-201ENST00000254816 NENFQ9UMX5 172 aa20.34■□□□□ 0.85
TRIM47-201ENST00000254816 MEFVO15553 781 aaPredicted RBP20.33■□□□□ 0.85
TRIM47-201ENST00000254816 CALCAP01258 141 aa20.33■□□□□ 0.85
TRIM47-201ENST00000254816 STAG3L1P0CL83 205 aa20.33■□□□□ 0.85
TRIM47-201ENST00000254816 TFAMQ00059 246 aaKnown RBP20.33■□□□□ 0.85
TRIM47-201ENST00000254816 PALB2Q86YC2 1186 aa20.33■□□□□ 0.85
TRIM47-201ENST00000254816 PARD6BQ9BYG5 372 aa20.33■□□□□ 0.85
TRIM47-201ENST00000254816 GCOM2Q9BZD3 368 aaPredicted RBP20.33■□□□□ 0.85
TRIM47-201ENST00000254816 UMODL1Q5DID0 1318 aa20.33■□□□□ 0.85
TRIM47-201ENST00000254816 ZC3H11AO75152 810 aaKnown RBP eCLIP20.33■□□□□ 0.84
TRIM47-201ENST00000254816 ZRANB2O95218 330 aaKnown RBP eCLIP20.33■□□□□ 0.84
TRIM47-201ENST00000254816 MCF2P10911 925 aa20.33■□□□□ 0.84
TRIM47-201ENST00000254816 TNFAIP3P21580 790 aa20.33■□□□□ 0.84
TRIM47-201ENST00000254816 NCOA4Q13772 614 aa20.33■□□□□ 0.84
TRIM47-201ENST00000254816 TRAPPC11Q7Z392 1133 aa20.33■□□□□ 0.84
TRIM47-201ENST00000254816 SLC47A2Q86VL8 602 aa20.33■□□□□ 0.84
TRIM47-201ENST00000254816 RABGGTAQ92696 567 aa20.33■□□□□ 0.84
TRIM47-201ENST00000254816 VTI1AQ96AJ9 217 aa20.33■□□□□ 0.84
TRIM47-201ENST00000254816 AGPAT1Q99943 283 aa20.33■□□□□ 0.84
TRIM47-201ENST00000254816 LUC7LQ9NQ29 371 aaKnown RBP20.33■□□□□ 0.84
TRIM47-201ENST00000254816 TAF3Q5VWG9 929 aa20.32■□□□□ 0.84
TRIM47-201ENST00000254816 FMNL3Q8IVF7 1028 aa20.32■□□□□ 0.84
TRIM47-201ENST00000254816 MTG1Q9BT17 334 aaPredicted RBP20.32■□□□□ 0.84
TRIM47-201ENST00000254816 UPF3AQ9H1J1 476 aaKnown RBP20.32■□□□□ 0.84
TRIM47-201ENST00000254816 SRRDQ9UH36 339 aa20.32■□□□□ 0.84
TRIM47-201ENST00000254816 A0A1B0GUA9 196 aa20.32■□□□□ 0.84
TRIM47-201ENST00000254816 ATP1A1P05023 1023 aaKnown RBP20.32■□□□□ 0.84
TRIM47-201ENST00000254816 KRT5P13647 590 aa20.32■□□□□ 0.84
TRIM47-201ENST00000254816 NAP1L1P55209 391 aaKnown RBP20.32■□□□□ 0.84
TRIM47-201ENST00000254816 GCNT1Q02742 428 aa20.32■□□□□ 0.84
TRIM47-201ENST00000254816 DMTNQ08495 405 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms