RNA–Protein interactions for RNA: ENST00000253048.9

ZC3H4-201, Transcript of zinc finger CCCH-type containing 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ZC3H4, Length 6,119 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4-201ENST00000253048 RAD18Q9NS91 495 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.12■□□□□ 0.017e-6■□□□□ 8.7
ZC3H4-201ENST00000253048 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 KANSL3Q9P2N6 904 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 CFLARO15519 480 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 OPHN1O60890 802 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 PCDH8O95206 1070 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 ELAVL2Q12926 359 aaKnown RBP15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 PDAP1Q13442 181 aaKnown RBP15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 MUM1Q2TAK8 710 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 HEMGNQ9BXL5 484 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 KLHL11Q9NVR0 708 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 FBXO10Q9UK96 956 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 FAF1Q9UNN5 650 aaPredicted RBP15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 LRRC53A6NM62 1247 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 C5orf58C9J3I9 102 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 ADCY3O60266 1144 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 CYP2C19P33261 490 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 ARHGAP25P42331 645 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 IFNLR1Q8IU57 520 aaPredicted RBP15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 FBXO32Q969P5 355 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 CEP19Q96LK0 163 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 ASPSCR1Q9BZE9 553 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 AP3B1O00203 1094 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 NDUFS3O75489 264 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 TDP2O95551 362 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 ASS1P00966 412 aaKnown RBP15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 IGKV5-2P06315 115 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 CDH6P55285 790 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 DEUP1Q05D60 604 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 ZNF543Q08ER8 600 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 NOGQ13253 232 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 ZNF280DQ6N043 979 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 FBXO16Q8IX29 292 aaPredicted RBP15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 PROM2Q8N271 834 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 MRFAP1L1Q96HT8 127 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 AGBL1Q96MI9 1066 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 CIPCQ9C0C6 399 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 NHEJ1Q9H9Q4 299 aaPredicted RBP15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 SYTL2Q9HCH5 934 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 PARVAQ9NVD7 372 aa15.12■□□□□ 0.01
ZC3H4-201ENST00000253048 TLR2O60603 784 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 MSCO60682 206 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 WEE1P30291 646 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 ITPK1Q13572 414 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 SGSM1Q2NKQ1 1148 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 ZC3H12BQ5HYM0 836 aaKnown RBP15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 RABGAP1LQ5R372 815 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 C11orf96Q7Z7L8 435 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 TAGAPQ8N103 731 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 LATS2Q9NRM7 1088 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 LMBRD1Q9NUN5 540 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 TBK1Q9UHD2 729 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 UBQLN1Q9UMX0 589 aaKnown RBP15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 GTPBP10A4D1E9 387 aaKnown RBP15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 C3orf70A6NLC5 250 aaPredicted RBP15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 ETFBP38117 255 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 DR1Q01658 176 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 EPHA10Q5JZY3 1008 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 CHCHD3Q9NX63 227 aaKnown RBP15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 SLC39A10Q9ULF5 831 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 EIF3DO15371 548 aaKnown RBP eCLIP15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 FAM200BP0CF97 657 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 ACOT2P49753 483 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 SH3BGRP55822 239 aaPredicted RBP15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 SP3Q02447 781 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 CYB5R4Q7L1T6 521 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 PHACTR4Q8IZ21 702 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 XPO6Q96QU8 1125 aaKnown RBP15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 NUP85Q9BW27 656 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 NFKBIL1Q9UBC1 381 aaPredicted RBP15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 PCDHA13Q9Y5I0 950 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 F5H5T6 163 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 ATP9BO43861 1147 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 H2AFYO75367 372 aaKnown RBP15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 KRT38O76015 456 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 BACE1P56817 501 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 PTRHD1Q6GMV3 140 aaKnown RBP15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 ERAP2Q6P179 960 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 MMS22LQ6ZRQ5 1243 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 MRPL9Q9BYD2 267 aaKnown RBP15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 CAPN10Q9HC96 672 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 PKP3Q9Y446 797 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 CAMSAP1Q5T5Y3 1602 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 TULP4Q9NRJ4 1543 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 ZNF263O14978 683 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 INPP5BP32019 993 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 SGCGQ13326 291 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 ZNF34Q8IZ26 560 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 DSEQ9UL01 958 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 PCDHB9Q9Y5E1 797 aa15.11■□□□□ 0.01
ZC3H4-201ENST00000253048 ADM5C9JUS6 153 aa15.1■□□□□ 0.01
ZC3H4-201ENST00000253048 HIRAP54198 1017 aaPredicted RBP15.1■□□□□ 0.01
ZC3H4-201ENST00000253048 PKP1Q13835 747 aa15.1■□□□□ 0.01
ZC3H4-201ENST00000253048 DDI1Q8WTU0 396 aa15.1■□□□□ 0.01
ZC3H4-201ENST00000253048 RNF25Q96BH1 459 aaPredicted RBP15.1■□□□□ 0.01
ZC3H4-201ENST00000253048 SAYSD1Q9NPB0 183 aa15.1■□□□□ 0.01
ZC3H4-201ENST00000253048 CARNS1A5YM72 827 aa15.1■□□□□ 0.01
ZC3H4-201ENST00000253048 E2F6O75461 281 aa15.1■□□□□ 0.01
ZC3H4-201ENST00000253048 HMOX2P30519 316 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 109.7 ms