RNA–Protein interactions for RNA: ENST00000251775.8

SNX4-201, Transcript of sorting nexin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX4, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX4-201ENST00000251775 ANKRD20A3Q5VUR7 823 aa20.23■□□□□ 0.83
SNX4-201ENST00000251775 HAUS6Q7Z4H7 955 aa20.23■□□□□ 0.83
SNX4-201ENST00000251775 SPATA21Q7Z572 469 aa20.23■□□□□ 0.83
SNX4-201ENST00000251775 SLC20A1Q8WUM9 679 aa20.23■□□□□ 0.83
SNX4-201ENST00000251775 ARHGEF2Q92974 986 aaKnown RBP20.23■□□□□ 0.83
SNX4-201ENST00000251775 IFT74Q96LB3 600 aa20.23■□□□□ 0.83
SNX4-201ENST00000251775 RXFP1Q9HBX9 757 aa20.23■□□□□ 0.83
SNX4-201ENST00000251775 PGM5Q15124 567 aa20.22■□□□□ 0.83
SNX4-201ENST00000251775 C12orf56Q8IXR9 622 aa20.22■□□□□ 0.83
SNX4-201ENST00000251775 MICAL1Q8TDZ2 1067 aa20.22■□□□□ 0.83
SNX4-201ENST00000251775 LPAR1Q92633 364 aa20.22■□□□□ 0.83
SNX4-201ENST00000251775 TEPSINQ96N21 525 aa20.22■□□□□ 0.83
SNX4-201ENST00000251775 RUNDC3BQ96NL0 473 aa20.22■□□□□ 0.83
SNX4-201ENST00000251775 AGPAT1Q99943 283 aa20.22■□□□□ 0.83
SNX4-201ENST00000251775 DDX23Q9BUQ8 820 aaKnown RBP20.22■□□□□ 0.83
SNX4-201ENST00000251775 KIAA1683Q9H0B3 1180 aa20.22■□□□□ 0.83
SNX4-201ENST00000251775 MLXIPLQ9NP71 852 aa20.22■□□□□ 0.83
SNX4-201ENST00000251775 HSPBP1Q9NZL4 362 aa20.22■□□□□ 0.83
SNX4-201ENST00000251775 MYCLP12524 364 aaPredicted RBP20.22■□□□□ 0.83
SNX4-201ENST00000251775 CCNG1P51959 295 aa20.22■□□□□ 0.83
SNX4-201ENST00000251775 GTF2BQ00403 316 aa20.22■□□□□ 0.83
SNX4-201ENST00000251775 MAP2K1Q02750 393 aaPredicted RBP20.22■□□□□ 0.83
SNX4-201ENST00000251775 EPC2Q52LR7 807 aa20.22■□□□□ 0.83
SNX4-201ENST00000251775 CCDC25Q86WR0 208 aa20.22■□□□□ 0.83
SNX4-201ENST00000251775 RMDN2Q96LZ7 410 aa20.22■□□□□ 0.83
SNX4-201ENST00000251775 MIF4GDA9UHW6 222 aaKnown RBP20.21■□□□□ 0.83
SNX4-201ENST00000251775 SLC16A4O15374 487 aa20.21■□□□□ 0.83
SNX4-201ENST00000251775 EGFRP00533 1210 aa20.21■□□□□ 0.83
SNX4-201ENST00000251775 ATP2A2P16615 1042 aaKnown RBP20.21■□□□□ 0.83
SNX4-201ENST00000251775 RFX1P22670 979 aa20.21■□□□□ 0.83
SNX4-201ENST00000251775 HADHBP55084 474 aaKnown RBP20.21■□□□□ 0.83
SNX4-201ENST00000251775 MKRN4PQ13434 485 aaPredicted RBP20.21■□□□□ 0.83
SNX4-201ENST00000251775 BLMHQ13867 455 aa20.21■□□□□ 0.83
SNX4-201ENST00000251775 XXYLT1Q8NBI6 393 aa20.21■□□□□ 0.83
SNX4-201ENST00000251775 TMEM174Q8WUU8 243 aa20.21■□□□□ 0.83
SNX4-201ENST00000251775 CKAP2Q8WWK9 683 aa20.21■□□□□ 0.83
SNX4-201ENST00000251775 ZSWIM1Q9BR11 485 aa20.21■□□□□ 0.83
SNX4-201ENST00000251775 KIF9Q9HAQ2 790 aa20.21■□□□□ 0.83
SNX4-201ENST00000251775 TBC1D22BQ9NU19 505 aa20.21■□□□□ 0.83
SNX4-201ENST00000251775 CORO1CQ9ULV4 474 aaPredicted RBP20.21■□□□□ 0.83
SNX4-201ENST00000251775 WDR81Q562E7 1941 aa20.21■□□□□ 0.83
SNX4-201ENST00000251775 TCRBV7S2A1N4TA0A589 114 aa20.21■□□□□ 0.83
SNX4-201ENST00000251775 ABL2P42684 1182 aa20.21■□□□□ 0.83
SNX4-201ENST00000251775 PEX3P56589 373 aa20.21■□□□□ 0.83
SNX4-201ENST00000251775 C11orf63Q6NUN7 778 aa20.21■□□□□ 0.83
SNX4-201ENST00000251775 UBL4BQ8N7F7 174 aa20.21■□□□□ 0.83
SNX4-201ENST00000251775 VPS33BQ9H267 617 aa20.21■□□□□ 0.83
SNX4-201ENST00000251775 CDC42EP4Q9H3Q1 356 aaKnown RBP20.21■□□□□ 0.83
SNX4-201ENST00000251775 PTPN22Q9Y2R2 807 aa20.21■□□□□ 0.83
SNX4-201ENST00000251775 LIN7AO14910 233 aaPredicted RBP20.2■□□□□ 0.82
SNX4-201ENST00000251775 CCNE2O96020 404 aa20.2■□□□□ 0.82
SNX4-201ENST00000251775 MGAT5Q09328 741 aa20.2■□□□□ 0.82
SNX4-201ENST00000251775 RHOT2Q8IXI1 618 aa20.2■□□□□ 0.82
SNX4-201ENST00000251775 ANKLE1Q8NAG6 615 aa20.2■□□□□ 0.82
SNX4-201ENST00000251775 KAT5Q92993 513 aa20.2■□□□□ 0.82
SNX4-201ENST00000251775 EME2A4GXA9 379 aaPredicted RBP20.2■□□□□ 0.82
SNX4-201ENST00000251775 FOXO6A8MYZ6 492 aa20.2■□□□□ 0.82
SNX4-201ENST00000251775 GH1P01241 217 aa20.2■□□□□ 0.82
SNX4-201ENST00000251775 CCNB1P14635 433 aa20.2■□□□□ 0.82
SNX4-201ENST00000251775 PEX5P50542 639 aa20.2■□□□□ 0.82
SNX4-201ENST00000251775 LACTBP83111 547 aaPredicted RBP20.2■□□□□ 0.82
SNX4-201ENST00000251775 MPP2Q14168 576 aa20.2■□□□□ 0.82
SNX4-201ENST00000251775 CYP1B1Q16678 543 aa20.2■□□□□ 0.82
SNX4-201ENST00000251775 PLA2G4FQ68DD2 849 aa20.2■□□□□ 0.82
SNX4-201ENST00000251775 CGB2Q6NT52 195 aa20.2■□□□□ 0.82
SNX4-201ENST00000251775 TRMT10CQ7L0Y3 403 aaKnown RBP20.2■□□□□ 0.82
SNX4-201ENST00000251775 CYFIP1Q7L576 1253 aa20.2■□□□□ 0.82
SNX4-201ENST00000251775 C4orf19Q8IY42 314 aa20.2■□□□□ 0.82
SNX4-201ENST00000251775 ANKRD42Q8N9B4 389 aa20.2■□□□□ 0.82
SNX4-201ENST00000251775 PLCD4Q9BRC7 762 aa20.2■□□□□ 0.82
SNX4-201ENST00000251775 MOV10L1Q9BXT6 1211 aaKnown RBP20.2■□□□□ 0.82
SNX4-201ENST00000251775 ST6GALNAC4Q9H4F1 302 aa20.2■□□□□ 0.82
SNX4-201ENST00000251775 AAASQ9NRG9 546 aa20.2■□□□□ 0.82
SNX4-201ENST00000251775 GOLGA8IPA6NC78 632 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 GOLGA8JA6NMD2 632 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 TMEM110-MUSTN1A8MSY1 372 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 GGPS1O95749 300 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 ADRB2P07550 413 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 CALRP27797 417 aaKnown RBP20.19■□□□□ 0.82
SNX4-201ENST00000251775 COILP38432 576 aaPredicted RBP20.19■□□□□ 0.82
SNX4-201ENST00000251775 PEX19P40855 299 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 ATP11AP98196 1134 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 SERPINB12Q96P63 405 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 TAOK3Q9H2K8 898 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 CTNNAL1Q9UBT7 734 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 TP73O15350 636 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 P4HA2O15460 535 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 ACSL3O95573 720 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 KCNJ1P48048 391 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 NCKAP1LP55160 1127 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 CIAPIN1Q6FI81 312 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 CCDC105Q8IYK2 499 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 GDAP1Q8TB36 358 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 SAAL1Q96ER3 474 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 RMDN3Q96TC7 470 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 PDCD2LQ9BRP1 358 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 TMEM117Q9H0C3 514 aa20.19■□□□□ 0.82
SNX4-201ENST00000251775 UTP3Q9NQZ2 479 aaKnown RBP eCLIP20.19■□□□□ 0.822e-6■■■■■ 96.1
SNX4-201ENST00000251775 MAP3K20Q9NYL2 800 aaKnown RBP20.19■□□□□ 0.82
SNX4-201ENST00000251775 CTTNBP2NLQ9P2B4 639 aa20.19■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms