RNA–Protein interactions for RNA: ENST00000248121.6

SYNGR3-201, Transcript of synaptogyrin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNGR3, Length 2,051 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR3-201ENST00000248121 PI4K2AQ9BTU6 479 aa25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 TMCO5BA8MYB1 307 aa25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 INO80B-WBP1J3KQ70 363 aa25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 SEPT4O43236 478 aa25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 TCP1P17987 556 aaKnown RBP25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 TNFAIP3P21580 790 aa25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 EFNA5P52803 228 aa25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 CKAP4Q07065 602 aaKnown RBP25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 MEI1Q5TIA1 1274 aa25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 ZPBP2Q6X784 338 aa25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 ZBTB8OSQ8IWT0 167 aa25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 LRRC57Q8N9N7 239 aa25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 ZNF296Q8WUU4 475 aaPredicted RBP25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 NT5C1BQ96P26 610 aa25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 INO80BQ9C086 356 aaPredicted RBP25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 ACP6Q9NPH0 428 aa25.16■■□□□ 1.62
SYNGR3-201ENST00000248121 FAM189A1O60320 539 aa25.15■■□□□ 1.62
SYNGR3-201ENST00000248121 SGPL1O95470 568 aa25.15■■□□□ 1.62
SYNGR3-201ENST00000248121 C4BPAP04003 597 aaKnown RBP25.15■■□□□ 1.62
SYNGR3-201ENST00000248121 MFAP3P55082 362 aa25.15■■□□□ 1.62
SYNGR3-201ENST00000248121 GJA9P57773 515 aa25.15■■□□□ 1.62
SYNGR3-201ENST00000248121 TUBB4BP68371 445 aa25.15■■□□□ 1.62
SYNGR3-201ENST00000248121 ZACNQ401N2 412 aa25.15■■□□□ 1.62
SYNGR3-201ENST00000248121 FAM49AQ9H0Q0 323 aaPredicted RBP25.15■■□□□ 1.62
SYNGR3-201ENST00000248121 RBAKQ9NYW8 714 aaPredicted RBP25.15■■□□□ 1.62
SYNGR3-201ENST00000248121 NOCTQ9UK39 431 aaKnown RBP25.15■■□□□ 1.62
SYNGR3-201ENST00000248121 CNTNAP2Q9UHC6 1331 aa25.15■■□□□ 1.62
SYNGR3-201ENST00000248121 A0A0A6YYK5 440 aaPredicted RBP25.14■■□□□ 1.62
SYNGR3-201ENST00000248121 RHOXF2BP0C7M4 288 aa25.14■■□□□ 1.62
SYNGR3-201ENST00000248121 GNASQ5JWF2 1037 aa25.14■■□□□ 1.62
SYNGR3-201ENST00000248121 TDRD10Q5VZ19 366 aaKnown RBP25.14■■□□□ 1.62
SYNGR3-201ENST00000248121 EPS8L1Q8TE68 723 aa25.14■■□□□ 1.62
SYNGR3-201ENST00000248121 RHOXF2Q9BQY4 288 aa25.14■■□□□ 1.62
SYNGR3-201ENST00000248121 GOLPH3Q9H4A6 298 aa25.14■■□□□ 1.62
SYNGR3-201ENST00000248121 PACSIN2Q9UNF0 486 aaPredicted RBP25.14■■□□□ 1.62
SYNGR3-201ENST00000248121 FAM170AA1A519 330 aa25.14■■□□□ 1.61
SYNGR3-201ENST00000248121 ABLIM1O14639 778 aa25.14■■□□□ 1.61
SYNGR3-201ENST00000248121 CYP26A1O43174 497 aa25.14■■□□□ 1.61
SYNGR3-201ENST00000248121 LDHAP00338 332 aaKnown RBP25.14■■□□□ 1.61
SYNGR3-201ENST00000248121 CHRNB2P17787 502 aa25.14■■□□□ 1.61
SYNGR3-201ENST00000248121 USP8P40818 1118 aa25.14■■□□□ 1.61
SYNGR3-201ENST00000248121 ADAM17P78536 824 aa25.14■■□□□ 1.61
SYNGR3-201ENST00000248121 TFDP1Q14186 410 aa25.14■■□□□ 1.61
SYNGR3-201ENST00000248121 MAPK6Q16659 721 aa25.14■■□□□ 1.61
SYNGR3-201ENST00000248121 CXCL17Q6UXB2 119 aa25.14■■□□□ 1.61
SYNGR3-201ENST00000248121 ZNF572Q7Z3I7 529 aaPredicted RBP25.14■■□□□ 1.61
SYNGR3-201ENST00000248121 ZBTB33Q86T24 672 aa25.14■■□□□ 1.61
SYNGR3-201ENST00000248121 NOP9Q86U38 636 aaKnown RBP25.14■■□□□ 1.61
SYNGR3-201ENST00000248121 TPCN2Q8NHX9 752 aa25.14■■□□□ 1.61
SYNGR3-201ENST00000248121 FNBP1Q96RU3 617 aa25.14■■□□□ 1.61
SYNGR3-201ENST00000248121 ACO2Q99798 780 aaKnown RBP25.14■■□□□ 1.61
SYNGR3-201ENST00000248121 CCDC94Q9BW85 323 aaPredicted RBP25.14■■□□□ 1.61
SYNGR3-201ENST00000248121 FZD8Q9H461 694 aa25.14■■□□□ 1.61
SYNGR3-201ENST00000248121 EHD2Q9NZN4 543 aa25.14■■□□□ 1.61
SYNGR3-201ENST00000248121 TREHO43280 583 aa25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 ADAMTS4O75173 837 aa25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 TNNI1P19237 187 aa25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 MATR3P43243 847 aaKnown RBP eCLIP25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 SLC47A2Q86VL8 602 aa25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 CAGE1Q8TC20 777 aa25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 DHX38Q92620 1227 aaKnown RBP25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 MRPL4Q9BYD3 311 aaKnown RBP25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 UPF3AQ9H1J1 476 aaKnown RBP25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 ARGLU1Q9NWB6 273 aaPredicted RBP25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 SMARCAL1Q9NZC9 954 aa25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 RAB21Q9UL25 225 aa25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 NRCAMQ92823 1304 aa25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 ANK1P16157 1881 aa25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 VNN1O95497 513 aa25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 TMEM253P0C7T8 217 aa25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 NOP2P46087 812 aaKnown RBP25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 EEF1DP3Q658K8 133 aa25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 RPUSD2Q8IZ73 545 aaKnown RBP25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 RPGRIP1Q96KN7 1286 aa25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 PCDHB18PQ96TA0 734 aa25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 C2orf40Q9H1Z8 148 aa25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 SEPT11Q9NVA2 429 aaKnown RBP25.13■■□□□ 1.61
SYNGR3-201ENST00000248121 NCANO14594 1321 aa25.12■■□□□ 1.61
SYNGR3-201ENST00000248121 MBLAC1A4D2B0 266 aaPredicted RBP25.12■■□□□ 1.61
SYNGR3-201ENST00000248121 CLDN3O15551 220 aa25.12■■□□□ 1.61
SYNGR3-201ENST00000248121 TOM1L1O75674 476 aa25.12■■□□□ 1.61
SYNGR3-201ENST00000248121 ZRANB2O95218 330 aaKnown RBP eCLIP25.12■■□□□ 1.61
SYNGR3-201ENST00000248121 MYCNP04198 464 aaPredicted RBP25.12■■□□□ 1.61
SYNGR3-201ENST00000248121 RARBP10826 455 aa25.12■■□□□ 1.61
SYNGR3-201ENST00000248121 TMOD1P28289 359 aa25.12■■□□□ 1.61
SYNGR3-201ENST00000248121 TNFSF9P41273 254 aa25.12■■□□□ 1.61
SYNGR3-201ENST00000248121 AMHR2Q16671 573 aa25.12■■□□□ 1.61
SYNGR3-201ENST00000248121 KIZQ2M2Z5 673 aa25.12■■□□□ 1.61
SYNGR3-201ENST00000248121 CDHR5Q9HBB8 845 aa25.12■■□□□ 1.61
SYNGR3-201ENST00000248121 FRMPD3Q5JV73 1810 aa25.12■■□□□ 1.61
SYNGR3-201ENST00000248121 ASAP2O43150 1006 aa25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 ZC3H11AO75152 810 aaKnown RBP eCLIP25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 SEC31AO94979 1220 aaKnown RBP25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 HLA-DRAP01903 254 aa25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 FGFR4P22455 802 aa25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 NLRP7Q8WX94 980 aa25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 ARHGEF26Q96DR7 871 aa25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 OSGEPQ9NPF4 335 aa25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 XPNPEP3Q9NQH7 507 aa25.11■■□□□ 1.61
SYNGR3-201ENST00000248121 RRN3P2A6NIE6 340 aa25.11■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms