RNA–Protein interactions for RNA: ENST00000248089.7

HCFC1R1-201, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 1 (best) BASIC

Gene HCFC1R1, Length 965 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-201ENST00000248089 FEZF2Q8TBJ5 459 aa23.1■■□□□ 1.29
HCFC1R1-201ENST00000248089 ZMAT2Q96NC0 199 aaKnown RBP23.1■■□□□ 1.29
HCFC1R1-201ENST00000248089 HAPLN2Q9GZV7 340 aa23.1■■□□□ 1.29
HCFC1R1-201ENST00000248089 SLC38A7Q9NVC3 462 aa23.1■■□□□ 1.29
HCFC1R1-201ENST00000248089 CNTN3Q9P232 1028 aa23.1■■□□□ 1.29
HCFC1R1-201ENST00000248089 SPATA31D3P0C874 917 aa23.09■■□□□ 1.29
HCFC1R1-201ENST00000248089 CXCL8P10145 99 aa23.09■■□□□ 1.29
HCFC1R1-201ENST00000248089 SCP2P22307 547 aa23.09■■□□□ 1.29
HCFC1R1-201ENST00000248089 IGFBP6P24592 240 aaPredicted RBP23.09■■□□□ 1.29
HCFC1R1-201ENST00000248089 UPP1Q16831 310 aa23.09■■□□□ 1.29
HCFC1R1-201ENST00000248089 XKR4Q5GH76 650 aa23.09■■□□□ 1.29
HCFC1R1-201ENST00000248089 ATAT1Q5SQI0 421 aa23.09■■□□□ 1.29
HCFC1R1-201ENST00000248089 ALKAL1Q6UXT8 129 aa23.09■■□□□ 1.29
HCFC1R1-201ENST00000248089 SPATA31D4Q6ZUB0 917 aa23.09■■□□□ 1.29
HCFC1R1-201ENST00000248089 SFR1Q86XK3 245 aa23.09■■□□□ 1.29
HCFC1R1-201ENST00000248089 PDILTQ8N807 584 aa23.09■■□□□ 1.29
HCFC1R1-201ENST00000248089 DDX12PQ92771 950 aa23.09■■□□□ 1.29
HCFC1R1-201ENST00000248089 C11orf16Q9NQ32 467 aa23.09■■□□□ 1.29
HCFC1R1-201ENST00000248089 FNIP2Q9P278 1114 aa23.09■■□□□ 1.29
HCFC1R1-201ENST00000248089 NR2E1Q9Y466 385 aa23.09■■□□□ 1.29
HCFC1R1-201ENST00000248089 A0A087X0B3 334 aa23.08■■□□□ 1.29
HCFC1R1-201ENST00000248089 I3L4J1 428 aa23.08■■□□□ 1.29
HCFC1R1-201ENST00000248089 MEFVO15553 781 aaPredicted RBP23.08■■□□□ 1.29
HCFC1R1-201ENST00000248089 F13A1P00488 732 aa23.08■■□□□ 1.29
HCFC1R1-201ENST00000248089 KCNE1P15382 129 aa23.08■■□□□ 1.29
HCFC1R1-201ENST00000248089 PSMD5Q16401 504 aa23.08■■□□□ 1.29
HCFC1R1-201ENST00000248089 ZC2HC1CQ53FD0 456 aaPredicted RBP23.08■■□□□ 1.29
HCFC1R1-201ENST00000248089 DCLRE1AQ6PJP8 1040 aa23.08■■□□□ 1.29
HCFC1R1-201ENST00000248089 GPR65Q8IYL9 337 aa23.08■■□□□ 1.29
HCFC1R1-201ENST00000248089 C3orf58Q8NDZ4 430 aa23.08■■□□□ 1.29
HCFC1R1-201ENST00000248089 C18orf25Q96B23 403 aaPredicted RBP23.08■■□□□ 1.29
HCFC1R1-201ENST00000248089 FIZ1Q96SL8 496 aa23.08■■□□□ 1.29
HCFC1R1-201ENST00000248089 LRFN3Q9BTN0 628 aa23.08■■□□□ 1.29
HCFC1R1-201ENST00000248089 DPP7Q9UHL4 492 aa23.08■■□□□ 1.29
HCFC1R1-201ENST00000248089 ANK1P16157 1881 aa23.07■■□□□ 1.28
HCFC1R1-201ENST00000248089 MYMKA6NI61 221 aa23.07■■□□□ 1.28
HCFC1R1-201ENST00000248089 TMEM189-UBE2V1I3L0A0 370 aa23.07■■□□□ 1.28
HCFC1R1-201ENST00000248089 PODXLO00592 558 aa23.07■■□□□ 1.28
HCFC1R1-201ENST00000248089 YEATS4O95619 227 aa23.07■■□□□ 1.28
HCFC1R1-201ENST00000248089 PKP1Q13835 747 aa23.07■■□□□ 1.28
HCFC1R1-201ENST00000248089 SLC10A6Q3KNW5 377 aa23.07■■□□□ 1.28
HCFC1R1-201ENST00000248089 HERC4Q5GLZ8 1057 aaPredicted RBP23.07■■□□□ 1.28
HCFC1R1-201ENST00000248089 PDZRN4Q6ZMN7 1036 aaPredicted RBP23.07■■□□□ 1.28
HCFC1R1-201ENST00000248089 PIK3R5Q8WYR1 880 aa23.07■■□□□ 1.28
HCFC1R1-201ENST00000248089 KCNN1Q92952 543 aa23.07■■□□□ 1.28
HCFC1R1-201ENST00000248089 TGM5O43548 720 aa23.06■■□□□ 1.28
HCFC1R1-201ENST00000248089 GPR37L1O60883 481 aa23.06■■□□□ 1.28
HCFC1R1-201ENST00000248089 PPP6R2O75170 966 aa23.06■■□□□ 1.28
HCFC1R1-201ENST00000248089 PIGRP01833 764 aa23.06■■□□□ 1.28
HCFC1R1-201ENST00000248089 CLTAP09496 248 aa23.06■■□□□ 1.28
HCFC1R1-201ENST00000248089 PDIA4P13667 645 aaKnown RBP23.06■■□□□ 1.28
HCFC1R1-201ENST00000248089 COL9A1P20849 921 aa23.06■■□□□ 1.28
HCFC1R1-201ENST00000248089 ABCD1P33897 745 aa23.06■■□□□ 1.28
HCFC1R1-201ENST00000248089 TNFSF9P41273 254 aa23.06■■□□□ 1.28
HCFC1R1-201ENST00000248089 BRCC3P46736 316 aa23.06■■□□□ 1.28
HCFC1R1-201ENST00000248089 GTF2BQ00403 316 aa23.06■■□□□ 1.28
HCFC1R1-201ENST00000248089 SPAG1Q07617 926 aa23.06■■□□□ 1.28
HCFC1R1-201ENST00000248089 GPR149Q86SP6 731 aa23.06■■□□□ 1.28
HCFC1R1-201ENST00000248089 MAP4K3Q8IVH8 894 aa23.06■■□□□ 1.28
HCFC1R1-201ENST00000248089 DDX27Q96GQ7 796 aaKnown RBP23.06■■□□□ 1.28
HCFC1R1-201ENST00000248089 MSTO1Q9BUK6 570 aa23.06■■□□□ 1.28
HCFC1R1-201ENST00000248089 TBC1D7Q9P0N9 293 aa23.06■■□□□ 1.28
HCFC1R1-201ENST00000248089 TUBGCP4Q9UGJ1 667 aa23.06■■□□□ 1.28
HCFC1R1-201ENST00000248089 C2CD4DB7Z1M9 353 aa23.05■■□□□ 1.28
HCFC1R1-201ENST00000248089 TRAPPC3O43617 180 aa23.05■■□□□ 1.28
HCFC1R1-201ENST00000248089 RFPL2O75678 378 aa23.05■■□□□ 1.28
HCFC1R1-201ENST00000248089 IDEP14735 1019 aa23.05■■□□□ 1.28
HCFC1R1-201ENST00000248089 TKTP29401 623 aaKnown RBP23.05■■□□□ 1.28
HCFC1R1-201ENST00000248089 PPP2R3AQ06190 1150 aa23.05■■□□□ 1.28
HCFC1R1-201ENST00000248089 ZBTB41Q5SVQ8 909 aa23.05■■□□□ 1.28
HCFC1R1-201ENST00000248089 PDXDC1Q6P996 788 aa23.05■■□□□ 1.28
HCFC1R1-201ENST00000248089 LNX1Q8TBB1 728 aaPredicted RBP23.05■■□□□ 1.28
HCFC1R1-201ENST00000248089 MRPL44Q9H9J2 332 aaKnown RBP23.05■■□□□ 1.28
HCFC1R1-201ENST00000248089 CCDC195A0A1B0GUA6 201 aa23.04■■□□□ 1.28
HCFC1R1-201ENST00000248089 OGTO15294 1046 aa23.04■■□□□ 1.28
HCFC1R1-201ENST00000248089 GAP43P17677 238 aa23.04■■□□□ 1.28
HCFC1R1-201ENST00000248089 FGFR3P22607 806 aa23.04■■□□□ 1.28
HCFC1R1-201ENST00000248089 SLC39A4Q6P5W5 647 aa23.04■■□□□ 1.28
HCFC1R1-201ENST00000248089 CD300LGQ6UXG3 332 aa23.04■■□□□ 1.28
HCFC1R1-201ENST00000248089 C15orf39Q6ZRI6 1047 aa23.04■■□□□ 1.28
HCFC1R1-201ENST00000248089 CCDC149Q6ZUS6 474 aa23.04■■□□□ 1.28
HCFC1R1-201ENST00000248089 TDRD5Q8NAT2 981 aaKnown RBP23.04■■□□□ 1.28
HCFC1R1-201ENST00000248089 DNAJC19Q96DA6 116 aa23.04■■□□□ 1.28
HCFC1R1-201ENST00000248089 RAPGEFL1Q9UHV5 662 aa23.04■■□□□ 1.28
HCFC1R1-201ENST00000248089 NUB1Q9Y5A7 615 aa23.04■■□□□ 1.28
HCFC1R1-201ENST00000248089 TISP43B9A030 160 aa23.03■■□□□ 1.28
HCFC1R1-201ENST00000248089 CUTAO60888 179 aa23.03■■□□□ 1.28
HCFC1R1-201ENST00000248089 ENOX2Q16206 610 aaKnown RBP23.03■■□□□ 1.28
HCFC1R1-201ENST00000248089 KYAT1Q16773 422 aa23.03■■□□□ 1.28
HCFC1R1-201ENST00000248089 KREMEN2Q8NCW0 462 aa23.03■■□□□ 1.28
HCFC1R1-201ENST00000248089 CMASQ8NFW8 434 aaPredicted RBP23.03■■□□□ 1.28
HCFC1R1-201ENST00000248089 STAMQ92783 540 aa23.03■■□□□ 1.28
HCFC1R1-201ENST00000248089 FAM212AQ96EL1 285 aa23.03■■□□□ 1.28
HCFC1R1-201ENST00000248089 KIF12Q96FN5 646 aa23.03■■□□□ 1.28
HCFC1R1-201ENST00000248089 CLSTN3Q9BQT9 956 aa23.03■■□□□ 1.28
HCFC1R1-201ENST00000248089 ST6GALNAC4Q9H4F1 302 aa23.03■■□□□ 1.28
HCFC1R1-201ENST00000248089 PLEKHA4Q9H4M7 779 aa23.03■■□□□ 1.28
HCFC1R1-201ENST00000248089 RPF1Q9H9Y2 349 aaKnown RBP23.03■■□□□ 1.28
HCFC1R1-201ENST00000248089 PLEKHA5Q9HAU0 1116 aa23.03■■□□□ 1.28
HCFC1R1-201ENST00000248089 SEL1LQ9UBV2 794 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms