RNA–Protein interactions for RNA: ENST00000248054.9

SIN3B-201, Transcript of SIN3 transcription regulator family member B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SIN3B, Length 5,037 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-201ENST00000248054 NR1H3Q13133 447 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 ATF7IP2Q5U623 682 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 C9orf131Q5VYM1 1079 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 FOXR2Q6PJQ5 311 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 TNIP3Q96KP6 325 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 TTC25Q96NG3 672 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 STAP1Q9ULZ2 295 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 CASZ1Q86V15 1759 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 NCK2O43639 380 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 GUCY1A3Q02108 690 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 PASD1Q8IV76 773 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 KIRREL3Q8IZU9 778 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 FRMPD4Q14CM0 1322 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 PLIN4Q96Q06 1357 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 MAP2K7O14733 419 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 CPP00450 1065 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 EPHX2P34913 555 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 DGKDQ16760 1214 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 CFAP61Q8NHU2 1237 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 KCND1Q9NSA2 647 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 MAD1L1Q9Y6D9 718 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 SYNJ2BP-COX16A0A087WUM0 186 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 HLA-DRAP01903 254 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 SNHG28P0DPA3 235 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 KLHL29Q96CT2 875 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 NGRNQ9NPE2 291 aaKnown RBP16.72■□□□□ 0.27
SIN3B-201ENST00000248054 COX16Q9P0S2 106 aa16.72■□□□□ 0.27
SIN3B-201ENST00000248054 TRPM3Q9HCF6 1732 aaPredicted RBP16.71■□□□□ 0.27
SIN3B-201ENST00000248054 ACOT2P49753 483 aa16.71■□□□□ 0.27
SIN3B-201ENST00000248054 TRIM59Q8IWR1 403 aa16.71■□□□□ 0.27
SIN3B-201ENST00000248054 BLOC1S4Q9NUP1 217 aa16.71■□□□□ 0.27
SIN3B-201ENST00000248054 A0A087X0B3 334 aa16.71■□□□□ 0.27
SIN3B-201ENST00000248054 FAM86B1E9PN63 330 aa16.71■□□□□ 0.27
SIN3B-201ENST00000248054 FAM86B2P0C5J1 330 aa16.71■□□□□ 0.27
SIN3B-201ENST00000248054 DYNLT1P63172 113 aa16.71■□□□□ 0.27
SIN3B-201ENST00000248054 TBC1D1Q86TI0 1168 aaPredicted RBP16.71■□□□□ 0.27
SIN3B-201ENST00000248054 KIAA0895Q8NCT3 520 aa16.71■□□□□ 0.27
SIN3B-201ENST00000248054 SLC35G2Q8TBE7 412 aa16.71■□□□□ 0.27
SIN3B-201ENST00000248054 RNF139Q8WU17 664 aa16.71■□□□□ 0.27
SIN3B-201ENST00000248054 NOP53Q9NZM5 478 aaKnown RBP16.71■□□□□ 0.27
SIN3B-201ENST00000248054 RGPD2P0DJD1 1756 aa16.71■□□□□ 0.27
SIN3B-201ENST00000248054 LRP6O75581 1613 aa16.71■□□□□ 0.27
SIN3B-201ENST00000248054 LRRC10BA6NIK2 292 aa16.71■□□□□ 0.27
SIN3B-201ENST00000248054 PON1P27169 355 aa16.71■□□□□ 0.27
SIN3B-201ENST00000248054 MSH2P43246 934 aa16.71■□□□□ 0.27
SIN3B-201ENST00000248054 TSPY1Q01534 308 aa16.71■□□□□ 0.27
SIN3B-201ENST00000248054 TMEM132DQ14C87 1099 aa16.71■□□□□ 0.27
SIN3B-201ENST00000248054 RNPC3Q96LT9 517 aaKnown RBP16.71■□□□□ 0.27
SIN3B-201ENST00000248054 MAF1Q9H063 256 aa16.71■□□□□ 0.27
SIN3B-201ENST00000248054 ZWILCHQ9H900 591 aa16.71■□□□□ 0.27
SIN3B-201ENST00000248054 ATP5HO75947 161 aa16.71■□□□□ 0.26
SIN3B-201ENST00000248054 BASP1P80723 227 aaKnown RBP16.71■□□□□ 0.26
SIN3B-201ENST00000248054 IFRD2Q12894 506 aaPredicted RBP16.71■□□□□ 0.26
SIN3B-201ENST00000248054 FAM133BQ5BKY9 247 aaKnown RBP16.71■□□□□ 0.26
SIN3B-201ENST00000248054 SPIRE2Q8WWL2 714 aa16.71■□□□□ 0.26
SIN3B-201ENST00000248054 WDR18Q9BV38 432 aa16.71■□□□□ 0.26
SIN3B-201ENST00000248054 SLC40A1Q9NP59 571 aa16.71■□□□□ 0.26
SIN3B-201ENST00000248054 RSPH10B2B2RC85 870 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 CD4P01730 458 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 RSPH10BP0C881 870 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 KLC2Q9H0B6 622 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 MYPNQ86TC9 1320 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 DUOX1Q9NRD9 1551 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 TYW5A2RUC4 315 aaKnown RBP16.7■□□□□ 0.26
SIN3B-201ENST00000248054 PPATQ06203 517 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 TAF11Q15544 211 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 EFCAB12Q6NXP0 572 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 CD302Q8IX05 232 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 SH2D3CQ8N5H7 860 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 RBBP8NLQ8NC74 664 aaPredicted RBP16.7■□□□□ 0.26
SIN3B-201ENST00000248054 URGCPQ8TCY9 931 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 SPATC1LQ9H0A9 340 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 RPS6KA5O75582 802 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 PRLRP16471 622 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 NPTX2P47972 431 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 ARL4CP56559 192 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 METTL7BQ6UX53 244 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 UHMK1Q8TAS1 419 aaKnown RBP16.7■□□□□ 0.26
SIN3B-201ENST00000248054 TNFRSF25Q93038 417 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 SH2D3AQ9BRG2 576 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 NIF3L1Q9GZT8 377 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 MID2Q9UJV3 735 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 NOVA2Q9UNW9 492 aaKnown RBP16.7■□□□□ 0.26
SIN3B-201ENST00000248054 EIF4E1BA6NMX2 242 aaKnown RBP16.7■□□□□ 0.26
SIN3B-201ENST00000248054 DBN1Q16643 649 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 COBLL1Q53SF7 1204 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 CCNYQ8ND76 341 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 ZNF473Q8WTR7 871 aaKnown RBP16.7■□□□□ 0.26
SIN3B-201ENST00000248054 FAM53CQ9NYF3 392 aa16.7■□□□□ 0.26
SIN3B-201ENST00000248054 SCAF8Q9UPN6 1271 aaKnown RBP16.7■□□□□ 0.26
SIN3B-201ENST00000248054 LAMB4A4D0S4 1761 aa16.69■□□□□ 0.26
SIN3B-201ENST00000248054 POC1B-GALNT4F8VUJ3 575 aa16.69■□□□□ 0.26
SIN3B-201ENST00000248054 ZFXP17010 805 aaPredicted RBP16.69■□□□□ 0.26
SIN3B-201ENST00000248054 ERVK-24P63145 666 aa16.69■□□□□ 0.26
SIN3B-201ENST00000248054 SREBF2Q12772 1141 aa16.69■□□□□ 0.26
SIN3B-201ENST00000248054 LRRC23Q53EV4 343 aaPredicted RBP16.69■□□□□ 0.26
SIN3B-201ENST00000248054 NKRFO15226 690 aaKnown RBP eCLIP16.69■□□□□ 0.26
SIN3B-201ENST00000248054 ONECUT3O60422 494 aaPredicted RBP16.69■□□□□ 0.26
SIN3B-201ENST00000248054 SLITRK3O94933 977 aa16.69■□□□□ 0.26
SIN3B-201ENST00000248054 ZWINTO95229 277 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms