RNA–Protein interactions for RNA: ENST00000245479.2

SOX9-201, Transcript of SRY-box 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SOX9, Length 3,935 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-201ENST00000245479 MAPK4P31152 587 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 CHRNA3P32297 505 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 DHX34Q14147 1143 aaKnown RBP12.25□□□□□ -0.45
SOX9-201ENST00000245479 EAPPQ56P03 285 aaPredicted RBP12.25□□□□□ -0.45
SOX9-201ENST00000245479 XXYLT1Q8NBI6 393 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 B4GALNT2Q8NHY0 566 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 CCDC110Q8TBZ0 833 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 FBXO25Q8TCJ0 367 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 LRRN4Q8WUT4 740 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 GRAMD1AQ96CP6 724 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 CNOT8Q9UFF9 292 aaKnown RBP12.25□□□□□ -0.45
SOX9-201ENST00000245479 DCDC2CA8MYV0 355 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 PDXKO00764 312 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 DESP17661 470 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 COMTP21964 271 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 SEMA3FQ13275 785 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 CRY2Q49AN0 593 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 ERICH1Q86X53 443 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 CD302Q8IX05 232 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 TPCN2Q8NHX9 752 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 DEPTORQ8TB45 409 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 ZBTB45Q96K62 511 aaPredicted RBP12.25□□□□□ -0.45
SOX9-201ENST00000245479 ALG13Q9NP73 1137 aaKnown RBP12.25□□□□□ -0.45
SOX9-201ENST00000245479 MRPL42Q9Y6G3 142 aaKnown RBP12.25□□□□□ -0.45
SOX9-201ENST00000245479 ALS2Q96Q42 1657 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 IGSF9BQ9UPX0 1349 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 PHRF1Q9P1Y6 1649 aaKnown RBP12.25□□□□□ -0.45
SOX9-201ENST00000245479 INO80B-WBP1J3KQ70 363 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 ITGB5P18084 799 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 QARSP47897 775 aaKnown RBP12.25□□□□□ -0.45
SOX9-201ENST00000245479 PPP3CAQ08209 521 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 XRCC4Q13426 336 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 CRELD2Q6UXH1 353 aaPredicted RBP12.25□□□□□ -0.45
SOX9-201ENST00000245479 SULF1Q8IWU6 871 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 PALM2Q8IXS6 379 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 HIPK4Q8NE63 616 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 TAS1R2Q8TE23 839 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 C9orf72Q96LT7 481 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 APOL6Q9BWW8 343 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 INO80BQ9C086 356 aaPredicted RBP12.25□□□□□ -0.45
SOX9-201ENST00000245479 SNED1Q8TER0 1413 aa12.25□□□□□ -0.45
SOX9-201ENST00000245479 TGFB1I1O43294 461 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 HAUS5O94927 633 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 UBTFL6P0CB48 400 aaPredicted RBP12.24□□□□□ -0.45
SOX9-201ENST00000245479 PIK3CAP42336 1068 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 BFSP1Q12934 665 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 HSP90AA5PQ58FG0 334 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 MEI1Q5TIA1 1274 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 FAM161BQ96MY7 647 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 HAO1Q9UJM8 370 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 AGTPBP1Q9UPW5 1226 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 DIS3Q9Y2L1 958 aaKnown RBP12.24□□□□□ -0.45
SOX9-201ENST00000245479 ABCC6O95255 1503 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 CICQ96RK0 1608 aaPredicted RBP12.24□□□□□ -0.45
SOX9-201ENST00000245479 ASNSP08243 561 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 TMC3Q7Z5M5 1100 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 USP37Q86T82 979 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 LRRC71Q8N4P6 559 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 BBOF1Q8ND07 529 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 WNK4Q96J92 1243 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 NT5C1BQ96P26 610 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 KCTD10Q9H3F6 313 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 TUBGCP6Q96RT7 1819 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 ASTN1O14525 1302 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 hCG_1984214I3L0E3 225 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 NOP56O00567 594 aaKnown RBP12.24□□□□□ -0.45
SOX9-201ENST00000245479 ASAP2O43150 1006 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 HNRNPCP07910 306 aaKnown RBP eCLIP12.24□□□□□ -0.45
SOX9-201ENST00000245479 RXRBP28702 533 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 IFI35P80217 286 aaPredicted RBP12.24□□□□□ -0.45
SOX9-201ENST00000245479 CXCL9Q07325 125 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 PPP2R5DQ14738 602 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 PSMD6Q15008 389 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 UGCGQ16739 394 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 CDO1Q16878 200 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 SCYL2Q6P3W7 929 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 ARHGAP27Q6ZUM4 889 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 ZNF713Q8N859 430 aaPredicted RBP12.24□□□□□ -0.45
SOX9-201ENST00000245479 RFFLQ8WZ73 363 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 ACCSQ96QU6 501 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 PCSK1NQ9UHG2 260 aa12.24□□□□□ -0.45
SOX9-201ENST00000245479 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.24□□□□□ -0.45
SOX9-201ENST00000245479 MIF4GDA9UHW6 222 aaKnown RBP12.23□□□□□ -0.45
SOX9-201ENST00000245479 FNTAP49354 379 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 GRAMD1BQ3KR37 738 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 ZNF720Q7Z2F6 126 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 RHOT2Q8IXI1 618 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 ARHGAP18Q8N392 663 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 MREGQ8N565 214 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 NEUROG2Q9H2A3 272 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 APEX2Q9UBZ4 518 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 UPP2O95045 317 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 DRD4P21917 467 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 SREBF1P36956 1147 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 DEUP1Q05D60 604 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 DNAJC3Q13217 504 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 ETNPPLQ8TBG4 499 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 MAML1Q92585 1016 aa12.23□□□□□ -0.45
SOX9-201ENST00000245479 FAM163AQ96GL9 167 aaPredicted RBP12.23□□□□□ -0.45
SOX9-201ENST00000245479 CFAP57Q96MR6 1250 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms