RNA–Protein interactions for RNA: ENST00000244741.9

CDKN1A-201, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,180 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-201ENST00000244741 HAPLN2Q9GZV7 340 aa18.32■□□□□ 0.52
CDKN1A-201ENST00000244741 FZD8Q9H461 694 aa18.32■□□□□ 0.52
CDKN1A-201ENST00000244741 EXOC7Q9UPT5 735 aa18.32■□□□□ 0.52
CDKN1A-201ENST00000244741 TRAF3IP3Q9Y228 551 aa18.32■□□□□ 0.52
CDKN1A-201ENST00000244741 M0QZ92 97 aa18.32■□□□□ 0.52
CDKN1A-201ENST00000244741 DARSP14868 501 aaKnown RBP18.32■□□□□ 0.52
CDKN1A-201ENST00000244741 EIF4BP23588 611 aaKnown RBP18.32■□□□□ 0.52
CDKN1A-201ENST00000244741 GYS2P54840 703 aa18.32■□□□□ 0.52
CDKN1A-201ENST00000244741 TLE2Q04725 743 aa18.32■□□□□ 0.52
CDKN1A-201ENST00000244741 TRIM71Q2Q1W2 868 aaKnown RBP18.32■□□□□ 0.52
CDKN1A-201ENST00000244741 EDRF1Q3B7T1 1238 aa18.32■□□□□ 0.52
CDKN1A-201ENST00000244741 TDRD12Q587J7 1177 aaKnown RBP18.32■□□□□ 0.52
CDKN1A-201ENST00000244741 COL13A1Q5TAT6 717 aaPredicted RBP18.32■□□□□ 0.52
CDKN1A-201ENST00000244741 SFMBT2Q5VUG0 894 aa18.32■□□□□ 0.52
CDKN1A-201ENST00000244741 POMGNT1Q8WZA1 660 aa18.32■□□□□ 0.52
CDKN1A-201ENST00000244741 SYN2Q92777 582 aaPredicted RBP18.32■□□□□ 0.52
CDKN1A-201ENST00000244741 TCHPQ9BT92 498 aa18.32■□□□□ 0.52
CDKN1A-201ENST00000244741 C11orf49Q9H6J7 331 aa18.32■□□□□ 0.52
CDKN1A-201ENST00000244741 CETN3O15182 167 aa18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 AMHR2Q16671 573 aa18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 PPP4R3CPQ6ZMV5 832 aa18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 CATSPER4Q7RTX7 472 aa18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 COG1Q8WTW3 980 aa18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 MRPL4Q9BYD3 311 aaKnown RBP18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 NUCKS1Q9H1E3 243 aaKnown RBP18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 NOC2LQ9Y3T9 749 aaKnown RBP18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 ACKR2O00590 384 aa18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 N4BP1O75113 896 aaKnown RBP18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 ERLIN2O94905 339 aa18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 SERPING1P05155 500 aa18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 CKBP12277 381 aa18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 CRYBB1P53674 252 aaPredicted RBP18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 C2orf54Q08AI8 447 aa18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 LRRC26Q2I0M4 334 aa18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 HVCN1Q96D96 273 aa18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 ACO2Q99798 780 aaKnown RBP18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 NFKBIZQ9BYH8 718 aa18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 TRPV2Q9Y5S1 764 aa18.31■□□□□ 0.52
CDKN1A-201ENST00000244741 UMODL1Q5DID0 1318 aa18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 TARSL2A2RTX5 802 aaKnown RBP18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 ERICH4A6NGS2 130 aa18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 LRRIQ3A6PVS8 624 aaPredicted RBP18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 TSPAN1O60635 241 aa18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 ZMYND10O75800 440 aa18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 GHRP10912 638 aa18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 ARF4P18085 180 aaPredicted RBP18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 POU5F1BQ06416 359 aa18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 KCNH2Q12809 1159 aa18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 NFX1Q12986 1120 aaKnown RBP18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 EEF1DP3Q658K8 133 aa18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 HSPBP1Q9NZL4 362 aa18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 AKAP3O75969 853 aa18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 CD4P01730 458 aa18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 PRLRP16471 622 aa18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 MGAT3Q09327 533 aa18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 ZBTB41Q5SVQ8 909 aa18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 ATF7IP2Q5U623 682 aa18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 IFNLR1Q8IU57 520 aaPredicted RBP18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 ANKLE1Q8NAG6 615 aa18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 GANQ9H2C0 597 aa18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 PRMT7Q9NVM4 692 aaPredicted RBP18.3■□□□□ 0.52
CDKN1A-201ENST00000244741 NCK2O43639 380 aa18.29■□□□□ 0.52
CDKN1A-201ENST00000244741 EXOC3O60645 756 aa18.29■□□□□ 0.52
CDKN1A-201ENST00000244741 OSTNP61366 133 aa18.29■□□□□ 0.52
CDKN1A-201ENST00000244741 CDC42EP1Q00587 391 aa18.29■□□□□ 0.52
CDKN1A-201ENST00000244741 FAAP100Q0VG06 881 aa18.29■□□□□ 0.52
CDKN1A-201ENST00000244741 NECAB2Q7Z6G3 386 aa18.29■□□□□ 0.52
CDKN1A-201ENST00000244741 FAM228AQ86W67 206 aa18.29■□□□□ 0.52
CDKN1A-201ENST00000244741 ALS2CR12Q96Q35 445 aa18.29■□□□□ 0.52
CDKN1A-201ENST00000244741 OSBPL9Q96SU4 736 aa18.29■□□□□ 0.52
CDKN1A-201ENST00000244741 PPP1R12CQ9BZL4 782 aa18.29■□□□□ 0.52
CDKN1A-201ENST00000244741 AGO3Q9H9G7 860 aaKnown RBP18.29■□□□□ 0.52
CDKN1A-201ENST00000244741 SIP14410 1827 aa18.29■□□□□ 0.52
CDKN1A-201ENST00000244741 BUB1O43683 1085 aa18.28■□□□□ 0.52
CDKN1A-201ENST00000244741 IBSPP21815 317 aaPredicted RBP18.28■□□□□ 0.52
CDKN1A-201ENST00000244741 ACOT2P49753 483 aa18.28■□□□□ 0.52
CDKN1A-201ENST00000244741 ARID5AQ03989 594 aa18.28■□□□□ 0.52
CDKN1A-201ENST00000244741 GPS2Q13227 327 aa18.28■□□□□ 0.52
CDKN1A-201ENST00000244741 PSMB7Q99436 277 aa18.28■□□□□ 0.52
CDKN1A-201ENST00000244741 PIN4Q9Y237 131 aaKnown RBP18.28■□□□□ 0.52
CDKN1A-201ENST00000244741 CLDN3O15551 220 aa18.28■□□□□ 0.52
CDKN1A-201ENST00000244741 RPS6KA5O75582 802 aa18.28■□□□□ 0.52
CDKN1A-201ENST00000244741 MCM3P25205 808 aa18.28■□□□□ 0.52
CDKN1A-201ENST00000244741 HOXA11P31270 313 aaPredicted RBP18.28■□□□□ 0.52
CDKN1A-201ENST00000244741 CXCR5P32302 372 aa18.28■□□□□ 0.52
CDKN1A-201ENST00000244741 RAPGEF1Q13905 1077 aa18.28■□□□□ 0.52
CDKN1A-201ENST00000244741 DPY19L2P1Q6NXN4 242 aa18.28■□□□□ 0.52
CDKN1A-201ENST00000244741 CBWD2Q8IUF1 395 aa18.28■□□□□ 0.52
CDKN1A-201ENST00000244741 CEP120Q8N960 986 aa18.28■□□□□ 0.52
CDKN1A-201ENST00000244741 FAM213AQ9BRX8 229 aa18.28■□□□□ 0.52
CDKN1A-201ENST00000244741 MSTO1Q9BUK6 570 aa18.28■□□□□ 0.52
CDKN1A-201ENST00000244741 DCDC2CA8MYV0 355 aa18.27■□□□□ 0.52
CDKN1A-201ENST00000244741 ACTN1P12814 892 aa18.27■□□□□ 0.52
CDKN1A-201ENST00000244741 RPL13P26373 211 aaKnown RBP18.27■□□□□ 0.52
CDKN1A-201ENST00000244741 CD52P31358 61 aa18.27■□□□□ 0.52
CDKN1A-201ENST00000244741 CCL23P55773 120 aa18.27■□□□□ 0.52
CDKN1A-201ENST00000244741 MBTPS1Q14703 1052 aa18.27■□□□□ 0.52
CDKN1A-201ENST00000244741 ZNF568Q3ZCX4 644 aa18.27■□□□□ 0.52
CDKN1A-201ENST00000244741 KLHDC7AQ5VTJ3 777 aa18.27■□□□□ 0.52
CDKN1A-201ENST00000244741 TSHZ1Q6ZSZ6 1077 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms