RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 C2orf69Q8N8R5 385 aa19.85■□□□□ 0.77
HOXC11-201ENST00000243082 NLRP4Q96MN2 994 aa19.85■□□□□ 0.77
HOXC11-201ENST00000243082 PTPRHQ9HD43 1115 aa19.85■□□□□ 0.77
HOXC11-201ENST00000243082 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.85■□□□□ 0.77
HOXC11-201ENST00000243082 ACKR2O00590 384 aa19.85■□□□□ 0.77
HOXC11-201ENST00000243082 MTA2O94776 668 aa19.85■□□□□ 0.77
HOXC11-201ENST00000243082 PTENP60484 403 aa19.85■□□□□ 0.77
HOXC11-201ENST00000243082 GRM1Q13255 1194 aa19.85■□□□□ 0.77
HOXC11-201ENST00000243082 GRB14Q14449 540 aa19.85■□□□□ 0.77
HOXC11-201ENST00000243082 TSHZ1Q6ZSZ6 1077 aa19.85■□□□□ 0.77
HOXC11-201ENST00000243082 AFG1LQ8WV93 481 aa19.85■□□□□ 0.77
HOXC11-201ENST00000243082 BUD13Q9BRD0 619 aaKnown RBP eCLIP19.85■□□□□ 0.77
HOXC11-201ENST00000243082 CHORDC1Q9UHD1 332 aaPredicted RBP19.85■□□□□ 0.77
HOXC11-201ENST00000243082 CPSF3Q9UKF6 684 aaKnown RBP19.85■□□□□ 0.77
HOXC11-201ENST00000243082 ALG6Q9Y672 507 aa19.85■□□□□ 0.77
HOXC11-201ENST00000243082 PGRMC1O00264 195 aaKnown RBP19.84■□□□□ 0.77
HOXC11-201ENST00000243082 ASAP2O43150 1006 aa19.84■□□□□ 0.77
HOXC11-201ENST00000243082 CYP1A2P05177 515 aa19.84■□□□□ 0.77
HOXC11-201ENST00000243082 IGBP1P78318 339 aa19.84■□□□□ 0.77
HOXC11-201ENST00000243082 CUL2Q13617 745 aa19.84■□□□□ 0.77
HOXC11-201ENST00000243082 ACAD10Q6JQN1 1059 aa19.84■□□□□ 0.77
HOXC11-201ENST00000243082 C11orf63Q6NUN7 778 aa19.84■□□□□ 0.77
HOXC11-201ENST00000243082 WDR49Q8IV35 697 aa19.84■□□□□ 0.77
HOXC11-201ENST00000243082 KRT12Q99456 494 aa19.84■□□□□ 0.77
HOXC11-201ENST00000243082 MINDY3Q9H8M7 445 aa19.84■□□□□ 0.77
HOXC11-201ENST00000243082 RRAGCQ9HB90 399 aa19.84■□□□□ 0.77
HOXC11-201ENST00000243082 NUB1Q9Y5A7 615 aa19.84■□□□□ 0.77
HOXC11-201ENST00000243082 PCDHB2Q9Y5E7 798 aa19.84■□□□□ 0.77
HOXC11-201ENST00000243082 INO80B-WBP1J3KQ70 363 aa19.83■□□□□ 0.77
HOXC11-201ENST00000243082 B4GALT5O43286 388 aa19.83■□□□□ 0.77
HOXC11-201ENST00000243082 ATMINO43313 823 aaPredicted RBP19.83■□□□□ 0.77
HOXC11-201ENST00000243082 MBTD1Q05BQ5 628 aa19.83■□□□□ 0.77
HOXC11-201ENST00000243082 NCOA4Q13772 614 aa19.83■□□□□ 0.77
HOXC11-201ENST00000243082 CLEC16AQ2KHT3 1053 aa19.83■□□□□ 0.77
HOXC11-201ENST00000243082 DCAF12L1Q5VU92 463 aa19.83■□□□□ 0.77
HOXC11-201ENST00000243082 DPP9Q86TI2 863 aa19.83■□□□□ 0.77
HOXC11-201ENST00000243082 LINC01465Q8N7H1 131 aa19.83■□□□□ 0.77
HOXC11-201ENST00000243082 MAML3Q96JK9 1138 aa19.83■□□□□ 0.77
HOXC11-201ENST00000243082 PARK7Q99497 189 aaKnown RBP19.83■□□□□ 0.77
HOXC11-201ENST00000243082 C16orf70Q9BSU1 422 aa19.83■□□□□ 0.77
HOXC11-201ENST00000243082 INO80BQ9C086 356 aaPredicted RBP19.83■□□□□ 0.77
HOXC11-201ENST00000243082 NOC2LQ9Y3T9 749 aaKnown RBP19.83■□□□□ 0.77
HOXC11-201ENST00000243082 UMODL1Q5DID0 1318 aa19.83■□□□□ 0.77
HOXC11-201ENST00000243082 CST3P01034 146 aaPredicted RBP19.83■□□□□ 0.76
HOXC11-201ENST00000243082 GLI1P08151 1106 aa19.83■□□□□ 0.76
HOXC11-201ENST00000243082 CLTAP09496 248 aa19.83■□□□□ 0.76
HOXC11-201ENST00000243082 IQCF3P0C7M6 154 aa19.83■□□□□ 0.76
HOXC11-201ENST00000243082 AP3M2P53677 418 aa19.83■□□□□ 0.76
HOXC11-201ENST00000243082 FAM110CQ1W6H9 321 aa19.83■□□□□ 0.76
HOXC11-201ENST00000243082 ATF7IP2Q5U623 682 aa19.83■□□□□ 0.76
HOXC11-201ENST00000243082 MPZL3Q6UWV2 235 aa19.83■□□□□ 0.76
HOXC11-201ENST00000243082 AENQ8WTP8 325 aaKnown RBP19.83■□□□□ 0.76
HOXC11-201ENST00000243082 GTF3C4Q9UKN8 822 aa19.83■□□□□ 0.76
HOXC11-201ENST00000243082 PHACTR2O75167 634 aa19.82■□□□□ 0.76
HOXC11-201ENST00000243082 UNGP13051 313 aaPredicted RBP19.82■□□□□ 0.76
HOXC11-201ENST00000243082 TNFRSF8P28908 595 aa19.82■□□□□ 0.76
HOXC11-201ENST00000243082 BPIFB4P59827 614 aa19.82■□□□□ 0.76
HOXC11-201ENST00000243082 TNNC1P63316 161 aa19.82■□□□□ 0.76
HOXC11-201ENST00000243082 NOP14P78316 857 aaKnown RBP19.82■□□□□ 0.76
HOXC11-201ENST00000243082 ZNF677Q86XU0 584 aa19.82■□□□□ 0.76
HOXC11-201ENST00000243082 NFKBIZQ9BYH8 718 aa19.82■□□□□ 0.76
HOXC11-201ENST00000243082 IFT122Q9HBG6 1241 aa19.82■□□□□ 0.76
HOXC11-201ENST00000243082 TTC7AQ9ULT0 858 aaPredicted RBP19.82■□□□□ 0.76
HOXC11-201ENST00000243082 CNTN6Q9UQ52 1028 aa19.82■□□□□ 0.76
HOXC11-201ENST00000243082 EVPLQ92817 2033 aa19.82■□□□□ 0.76
HOXC11-201ENST00000243082 PPFIA4O75335 1185 aa19.81■□□□□ 0.76
HOXC11-201ENST00000243082 ZNF286BP0CG31 522 aa19.81■□□□□ 0.76
HOXC11-201ENST00000243082 POU5F1BQ06416 359 aa19.81■□□□□ 0.76
HOXC11-201ENST00000243082 EEF1DP3Q658K8 133 aa19.81■□□□□ 0.76
HOXC11-201ENST00000243082 PLEKHH3Q7Z736 793 aa19.81■□□□□ 0.76
HOXC11-201ENST00000243082 ZNF653Q96CK0 615 aa19.81■□□□□ 0.76
HOXC11-201ENST00000243082 NUP85Q9BW27 656 aa19.81■□□□□ 0.76
HOXC11-201ENST00000243082 GDF3Q9NR23 364 aa19.81■□□□□ 0.76
HOXC11-201ENST00000243082 SMPD1P17405 629 aa19.81■□□□□ 0.76
HOXC11-201ENST00000243082 TBXAS1P24557 533 aaPredicted RBP19.81■□□□□ 0.76
HOXC11-201ENST00000243082 KLHL7Q8IXQ5 586 aa19.81■□□□□ 0.76
HOXC11-201ENST00000243082 ALG3Q92685 438 aa19.81■□□□□ 0.76
HOXC11-201ENST00000243082 FAM212AQ96EL1 285 aa19.81■□□□□ 0.76
HOXC11-201ENST00000243082 GDAP1L1Q96MZ0 367 aa19.81■□□□□ 0.76
HOXC11-201ENST00000243082 AP1M1Q9BXS5 423 aa19.81■□□□□ 0.76
HOXC11-201ENST00000243082 MTMR12Q9C0I1 747 aa19.81■□□□□ 0.76
HOXC11-201ENST00000243082 CARD9Q9H257 536 aa19.81■□□□□ 0.76
HOXC11-201ENST00000243082 TNFSF13BQ9Y275 285 aa19.81■□□□□ 0.76
HOXC11-201ENST00000243082 H3BQF6 201 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 MAGEB2O15479 319 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 RAD51CO43502 376 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 HEXIM1O94992 359 aaKnown RBP19.8■□□□□ 0.76
HOXC11-201ENST00000243082 ASS1P00966 412 aaKnown RBP19.8■□□□□ 0.76
HOXC11-201ENST00000243082 HOXC6P09630 235 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 OAS2P29728 719 aaKnown RBP19.8■□□□□ 0.76
HOXC11-201ENST00000243082 SURF1Q15526 300 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 ZNF568Q3ZCX4 644 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 DUSP28Q4G0W2 176 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 CDR2LQ86X02 465 aaPredicted RBP19.8■□□□□ 0.76
HOXC11-201ENST00000243082 THNSL1Q8IYQ7 743 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 NPLOC4Q8TAT6 608 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 ZNF564Q8TBZ8 553 aaPredicted RBP19.8■□□□□ 0.76
HOXC11-201ENST00000243082 RPS6KC1Q96S38 1066 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 TINF2Q9BSI4 451 aa19.8■□□□□ 0.76
HOXC11-201ENST00000243082 VIPAS39Q9H9C1 493 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms