RNA–Protein interactions for RNA: ENST00000237186.10

UBE3D-201, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,879 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-201ENST00000237186 GOLGA6L10A6NI86 522 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 TULP2O00295 520 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 ADCY3O60266 1144 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 MAFO75444 373 aaPredicted RBP17.31■□□□□ 0.36
UBE3D-201ENST00000237186 MYZAPP0CAP1 466 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 SLC1A1P43005 524 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 ACOT2P49753 483 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 WNT7BP56706 349 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 CENPCQ03188 943 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 ZNF844Q08AG5 666 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 BIRC3Q13489 604 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 ZPBP2Q6X784 338 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.31■□□□□ 0.36
UBE3D-201ENST00000237186 C12orf50Q8NA57 414 aaPredicted RBP17.31■□□□□ 0.36
UBE3D-201ENST00000237186 MAGOHBQ96A72 148 aaKnown RBP17.31■□□□□ 0.36
UBE3D-201ENST00000237186 TARS2Q9BW92 718 aaKnown RBP17.31■□□□□ 0.36
UBE3D-201ENST00000237186 SPATC1LQ9H0A9 340 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 RBAKQ9NYW8 714 aaPredicted RBP17.31■□□□□ 0.36
UBE3D-201ENST00000237186 MTUS1Q9ULD2 1270 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 CNTNAP2Q9UHC6 1331 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 FAM170AA1A519 330 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 LRRIQ4A6NIV6 560 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 IRF6O14896 467 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 ERLIN2O94905 339 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 YBX3P16989 372 aaKnown RBP eCLIP17.31■□□□□ 0.36
UBE3D-201ENST00000237186 COPB2P35606 906 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 STAT5BP51692 787 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 DHX9Q08211 1270 aaKnown RBP17.31■□□□□ 0.36
UBE3D-201ENST00000237186 CUL2Q13617 745 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 SIX1Q15475 284 aaPredicted RBP17.31■□□□□ 0.36
UBE3D-201ENST00000237186 FAM160B1Q5W0V3 765 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 ADAT2Q7Z6V5 191 aaKnown RBP17.31■□□□□ 0.36
UBE3D-201ENST00000237186 SEPT1Q8WYJ6 367 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 ZBTB45Q96K62 511 aaPredicted RBP17.31■□□□□ 0.36
UBE3D-201ENST00000237186 BTBD6Q96KE9 485 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 CGRRF1Q99675 332 aa17.31■□□□□ 0.36
UBE3D-201ENST00000237186 KIAA1217Q5T5P2 1943 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 PTPRJQ12913 1337 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 SRRM3A6NNA2 597 aaPredicted RBP17.3■□□□□ 0.36
UBE3D-201ENST00000237186 ZEB2O60315 1214 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 NR1D1P20393 614 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 FNTAP49354 379 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 AP3M2P53677 418 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 EIF3BP55884 814 aaKnown RBP17.3■□□□□ 0.36
UBE3D-201ENST00000237186 GNGT1P63211 74 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 GRM1Q13255 1194 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 PRKG1Q13976 671 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 AGBL2Q5U5Z8 902 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 METTL7BQ6UX53 244 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 ZDHHC24Q6UX98 284 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 TRIM72Q6ZMU5 477 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 SLCO2A1Q92959 643 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 ELMO3Q96BJ8 720 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 C18orf8Q96DM3 657 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 VCPIP1Q96JH7 1222 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 MSTO1Q9BUK6 570 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 PLVAPQ9BX97 442 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 FAM129AQ9BZQ8 928 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 LRRC19Q9H756 370 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 PARP2Q9UGN5 583 aa17.3■□□□□ 0.36
UBE3D-201ENST00000237186 MYO1FO00160 1098 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 FSCN2O14926 492 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 TBXAS1P24557 533 aaPredicted RBP17.29■□□□□ 0.36
UBE3D-201ENST00000237186 COILP38432 576 aaPredicted RBP17.29■□□□□ 0.36
UBE3D-201ENST00000237186 PIK3CAP42336 1068 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 LMBRD2Q68DH5 695 aaPredicted RBP17.29■□□□□ 0.36
UBE3D-201ENST00000237186 PPP1R2P3Q6NXS1 205 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 TTC27Q6P3X3 843 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 CCDC137Q6PK04 289 aaKnown RBP17.29■□□□□ 0.36
UBE3D-201ENST00000237186 ARFGAP2Q8N6H7 521 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 UBLCP1Q8WVY7 318 aaPredicted RBP17.29■□□□□ 0.36
UBE3D-201ENST00000237186 FAM167AQ96KS9 214 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 APOBEC3GQ9HC16 384 aaKnown RBP17.29■□□□□ 0.36
UBE3D-201ENST00000237186 GRHL1Q9NZI5 618 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 CSADQ9Y600 493 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 WDR81Q562E7 1941 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 LCTP09848 1927 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 A0A0G2JLL6 359 aaPredicted RBP17.29■□□□□ 0.36
UBE3D-201ENST00000237186 EDN1P05305 212 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 NUDT17P0C025 328 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 MAPK4P31152 587 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 EFNA5P52803 228 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 PTP4A2Q12974 167 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 CAPSQ13938 189 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 MON1BQ7L1V2 547 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 PRRT2Q7Z6L0 340 aaPredicted RBP17.29■□□□□ 0.36
UBE3D-201ENST00000237186 SRLQ86TD4 932 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 CPNE8Q86YQ8 564 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 FAM84AQ96KN4 292 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 TRIM31Q9BZY9 425 aa17.29■□□□□ 0.36
UBE3D-201ENST00000237186 ADARB2Q9NS39 739 aaKnown RBP17.29■□□□□ 0.36
UBE3D-201ENST00000237186 MROH7Q68CQ1 1323 aa17.28■□□□□ 0.36
UBE3D-201ENST00000237186 CXCL11O14625 94 aa17.28■□□□□ 0.36
UBE3D-201ENST00000237186 GAS2O43903 313 aaKnown RBP17.28■□□□□ 0.36
UBE3D-201ENST00000237186 CLTAP09496 248 aa17.28■□□□□ 0.36
UBE3D-201ENST00000237186 RARAP10276 462 aa17.28■□□□□ 0.36
UBE3D-201ENST00000237186 IER5Q5VY09 327 aa17.28■□□□□ 0.36
UBE3D-201ENST00000237186 C9orf131Q5VYM1 1079 aa17.28■□□□□ 0.36
UBE3D-201ENST00000237186 KCNV1Q6PIU1 500 aa17.28■□□□□ 0.36
UBE3D-201ENST00000237186 EXOC8Q8IYI6 725 aa17.28■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms