RNA–Protein interactions for RNA: ENST00000229328.9

PRKAB1-201, Transcript of protein kinase AMP-activated non-catalytic subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKAB1, Length 2,610 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKAB1-201ENST00000229328 NUB1Q9Y5A7 615 aa15.48■□□□□ 0.07
PRKAB1-201ENST00000229328 KRIT1O00522 736 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 B4GALT5O43286 388 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 CST3P01034 146 aaPredicted RBP15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 MARCKSL1P49006 195 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 TNNC1P63316 161 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 IGBP1P78318 339 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 ZNF211Q13398 564 aaPredicted RBP15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 CUL2Q13617 745 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 MESDQ14696 234 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 MAPK6Q16659 721 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 CLEC16AQ2KHT3 1053 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 SND1Q7KZF4 910 aaKnown RBP eCLIP15.47■□□□□ 0.071e-7■□□□□ 9.5
PRKAB1-201ENST00000229328 BRSK2Q8IWQ3 736 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 ZBTB8OSQ8IWT0 167 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 ZNF653Q96CK0 615 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 DDX47Q9H0S4 455 aaKnown RBP15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 MINDY3Q9H8M7 445 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 NR2E1Q9Y466 385 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 GAS2O43903 313 aaKnown RBP15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 HBP1O60381 514 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 CYP1A2P05177 515 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 CFHP08603 1231 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 TNFRSF8P28908 595 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 SLC26A2P50443 739 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 ACAD10Q6JQN1 1059 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 C11orf63Q6NUN7 778 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 AADACL2Q6P093 401 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 CASKIN2Q8WXE0 1202 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 KRT35Q92764 455 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 FAM212AQ96EL1 285 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 NUP85Q9BW27 656 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 LOC102724159A0A0B4J2E5 919 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 FGGP02679 453 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 ADCYAP1R1P41586 468 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 CCNA1P78396 465 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 NCOA4Q13772 614 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 PWP2Q15269 919 aaKnown RBP15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 IFT81Q8WYA0 676 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 CCDC102AQ96A19 550 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 VIPAS39Q9H9C1 493 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 NFU1Q9UMS0 254 aa15.47■□□□□ 0.07
PRKAB1-201ENST00000229328 PLXNA1Q9UIW2 1896 aa15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 PHACTR2O75167 634 aa15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 MTA2O94776 668 aa15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 C22orf31O95567 290 aa15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 LGALS2P05162 132 aa15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 IQCF3P0C7M6 154 aa15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 COMTP21964 271 aa15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 SSTR3P32745 418 aaPredicted RBP15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 GTF2A2P52657 109 aa15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 NOP14P78316 857 aaKnown RBP15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 MCL1Q07820 350 aa15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 NAA35Q5VZE5 725 aa15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 IFT20Q8IY31 132 aa15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 CEP120Q8N960 986 aa15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 ZNF564Q8TBZ8 553 aaPredicted RBP15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 GTF3C2Q8WUA4 911 aaPredicted RBP15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 CALR3Q96L12 384 aaKnown RBP15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 MTMR12Q9C0I1 747 aa15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 KATNBL1Q9H079 304 aa15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 ERAP1Q9NZ08 941 aa15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 GTF3C4Q9UKN8 822 aa15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 PLXNB2O15031 1838 aa15.46■□□□□ 0.07
PRKAB1-201ENST00000229328 INO80B-WBP1J3KQ70 363 aa15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 OGTO15294 1046 aa15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 SART1O43290 800 aaKnown RBP15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 CSDE1O75534 798 aaKnown RBP15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 CLSTN1O94985 981 aa15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 CLTAP09496 248 aa15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 FAM153BP0C7A2 387 aa15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 UNGP13051 313 aaPredicted RBP15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 INSRRP14616 1297 aa15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 FAM153CQ494X1 144 aa15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 C2CD6Q53TS8 623 aa15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 EEF1DP3Q658K8 133 aa15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 ADAT2Q7Z6V5 191 aaKnown RBP15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 PHLDB2Q86SQ0 1253 aa15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 EXOC8Q8IYI6 725 aa15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 AFG1LQ8WV93 481 aa15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 CPA5Q8WXQ8 436 aa15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 FAM81BQ96LP2 452 aa15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 RNPC3Q96LT9 517 aaKnown RBP15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 INO80BQ9C086 356 aaPredicted RBP15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 FZD8Q9H461 694 aa15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 PTPRHQ9HD43 1115 aa15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 FAM153AQ9UHL3 310 aa15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 CPSF3Q9UKF6 684 aaKnown RBP15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 PCDHB4Q9Y5E5 795 aa15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 PCDHB2Q9Y5E7 798 aa15.46■□□□□ 0.06
PRKAB1-201ENST00000229328 SNAI1O95863 264 aaPredicted RBP15.45■□□□□ 0.06
PRKAB1-201ENST00000229328 ZNF286BP0CG31 522 aa15.45■□□□□ 0.06
PRKAB1-201ENST00000229328 PROZP22891 400 aa15.45■□□□□ 0.06
PRKAB1-201ENST00000229328 EPHB4P54760 987 aa15.45■□□□□ 0.06
PRKAB1-201ENST00000229328 OSTNP61366 133 aa15.45■□□□□ 0.06
PRKAB1-201ENST00000229328 LAMC2Q13753 1193 aa15.45■□□□□ 0.06
PRKAB1-201ENST00000229328 LLGL2Q6P1M3 1020 aa15.45■□□□□ 0.06
PRKAB1-201ENST00000229328 TMEM270Q6UE05 265 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms