RNA–Protein interactions for RNA: ENST00000225726.9

CCDC47-201, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC47, Length 3,466 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-201ENST00000225726 EPS8L1Q8TE68 723 aa16.02■□□□□ 0.15
CCDC47-201ENST00000225726 ADAMTS10Q9H324 1103 aa16.02■□□□□ 0.15
CCDC47-201ENST00000225726 IRX5P78411 483 aaPredicted RBP16.01■□□□□ 0.15
CCDC47-201ENST00000225726 BEX3Q00994 111 aa16.01■□□□□ 0.15
CCDC47-201ENST00000225726 NAA30Q147X3 362 aaPredicted RBP16.01■□□□□ 0.15
CCDC47-201ENST00000225726 RPUSD2Q8IZ73 545 aaKnown RBP16.01■□□□□ 0.15
CCDC47-201ENST00000225726 FAM212AQ96EL1 285 aa16.01■□□□□ 0.15
CCDC47-201ENST00000225726 RPF1Q9H9Y2 349 aaKnown RBP16.01■□□□□ 0.15
CCDC47-201ENST00000225726 SEPT11Q9NVA2 429 aaKnown RBP16.01■□□□□ 0.15
CCDC47-201ENST00000225726 HDAC6Q9UBN7 1215 aa16.01■□□□□ 0.15
CCDC47-201ENST00000225726 GABRQQ9UN88 632 aa16.01■□□□□ 0.15
CCDC47-201ENST00000225726 PCDHGC5Q9Y5F6 944 aa16.01■□□□□ 0.15
CCDC47-201ENST00000225726 GPR25O00155 361 aa16.01■□□□□ 0.15
CCDC47-201ENST00000225726 B4GALT4O60513 344 aa16.01■□□□□ 0.15
CCDC47-201ENST00000225726 TSPAN1O60635 241 aa16.01■□□□□ 0.15
CCDC47-201ENST00000225726 CSDE1O75534 798 aaKnown RBP16.01■□□□□ 0.15
CCDC47-201ENST00000225726 TBC1D8O95759 1140 aa16.01■□□□□ 0.15
CCDC47-201ENST00000225726 NCOA4Q13772 614 aa16.01■□□□□ 0.15
CCDC47-201ENST00000225726 DUOXA2Q1HG44 320 aa16.01■□□□□ 0.15
CCDC47-201ENST00000225726 NOP9Q86U38 636 aaKnown RBP16.01■□□□□ 0.15
CCDC47-201ENST00000225726 ANKRD7Q92527 254 aa16.01■□□□□ 0.15
CCDC47-201ENST00000225726 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.01■□□□□ 0.15
CCDC47-201ENST00000225726 V9GYY5 206 aaPredicted RBP16.01■□□□□ 0.15
CCDC47-201ENST00000225726 KPNA6O60684 536 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 ERLIN2O94905 339 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 CLTAP09496 248 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 TMEM253P0C7T8 217 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 CYP2C9P11712 490 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 ARF4P18085 180 aaPredicted RBP16■□□□□ 0.15
CCDC47-201ENST00000225726 PDE6CP51160 858 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 ADAM17P78536 824 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 CDR2LQ86X02 465 aaPredicted RBP16■□□□□ 0.15
CCDC47-201ENST00000225726 TRIB2Q92519 343 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 DHX38Q92620 1227 aaKnown RBP16■□□□□ 0.15
CCDC47-201ENST00000225726 ELMO3Q96BJ8 720 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 CPB2Q96IY4 423 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 NCANO14594 1321 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 TBXAS1P24557 533 aaPredicted RBP16■□□□□ 0.15
CCDC47-201ENST00000225726 GALCP54803 685 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 GCOM2Q9BZD3 368 aaPredicted RBP16■□□□□ 0.15
CCDC47-201ENST00000225726 IMPG2Q9BZV3 1241 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 MTMR12Q9C0I1 747 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 FAM49AQ9H0Q0 323 aaPredicted RBP16■□□□□ 0.15
CCDC47-201ENST00000225726 APOBEC3GQ9HC16 384 aaKnown RBP16■□□□□ 0.15
CCDC47-201ENST00000225726 TSKSQ9UJT2 592 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 CASP8AP2Q9UKL3 1982 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 AOC2O75106 756 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 GPR32O75388 356 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 PALMO75781 387 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 CHRNB2P17787 502 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 NOP14P78316 857 aaKnown RBP16■□□□□ 0.15
CCDC47-201ENST00000225726 CUL2Q13617 745 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 SLC47A2Q86VL8 602 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 CEP120Q8N960 986 aa16■□□□□ 0.15
CCDC47-201ENST00000225726 STAG3L1P0CL83 205 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 KRT5P13647 590 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 CYP11B1P15538 503 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 PRLRP16471 622 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 FLT3LGP49771 235 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 OSTNP61366 133 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 PURAQ00577 322 aaKnown RBP15.99■□□□□ 0.15
CCDC47-201ENST00000225726 KIZQ2M2Z5 673 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 SPOPLQ6IQ16 392 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 RUFY4Q6ZNE9 571 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 ANKRD36BP1Q96IX9 119 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 SNX12Q9UMY4 172 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 TNNC2P02585 160 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 TMEM191BP0C7N4 346 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 GJA9P57773 515 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 ELF2Q15723 593 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 DNAAF5Q86Y56 855 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 UBXN4Q92575 508 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 GOLGA1Q92805 767 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 CAPNS2Q96L46 248 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 UPF3AQ9H1J1 476 aaKnown RBP15.99■□□□□ 0.15
CCDC47-201ENST00000225726 CXCL8P10145 99 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 CDR2Q01850 454 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 PCBP1Q15365 356 aaKnown RBP eCLIP15.99■□□□□ 0.15
CCDC47-201ENST00000225726 ERCC6LQ2NKX8 1250 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 RSRC2Q7L4I2 434 aaKnown RBP15.99■□□□□ 0.15
CCDC47-201ENST00000225726 EFCAB13Q8IY85 973 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 ZNF710Q8N1W2 664 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 ISCUQ9H1K1 167 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 HYOU1Q9Y4L1 999 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 MYH10P35580 1976 aa15.99■□□□□ 0.15
CCDC47-201ENST00000225726 A0A1B0GUA9 196 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 C17orf102A2RUQ5 167 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 GRID2IPA4D2P6 1211 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 ANKRD62A6NC57 917 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 TMCO5BA8MYB1 307 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 ASS1P00966 412 aaKnown RBP15.98■□□□□ 0.15
CCDC47-201ENST00000225726 BPIFB4P59827 614 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 FMO1Q01740 532 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 HIC1Q14526 733 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 DEFB115Q30KQ5 88 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 PALB2Q86YC2 1186 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 TMEM192Q8IY95 271 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 CTNNBL1Q8WYA6 563 aaPredicted RBP15.98■□□□□ 0.15
CCDC47-201ENST00000225726 ADPGKQ9BRR6 497 aa15.98■□□□□ 0.15
CCDC47-201ENST00000225726 TAS2R14Q9NYV8 317 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms