RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 MTRF1LQ9UGC7 380 aaKnown RBP26.7■■□□□ 1.87
RUNDC3A-201ENST00000225441 ZNFX1Q9P2E3 1918 aaKnown RBP26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 PTGIRP43119 386 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 PEX5P50542 639 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 PSMC5P62195 406 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 DLG4P78352 724 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 IFFO1Q0D2I5 559 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 ZNF792Q3KQV3 632 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 KRT71Q3SY84 523 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 ODF2Q5BJF6 829 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 PALB2Q86YC2 1186 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 SLC20A1Q8WUM9 679 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 CBWD1Q9BRT8 395 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 TMEM117Q9H0C3 514 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 CENPHQ9H3R5 247 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 C17orf75Q9HAS0 396 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 CCDC169A6NNP5 214 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 YWHABP31946 246 aaKnown RBP26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 HPDP32754 393 aaPredicted RBP26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 ABCD1P33897 745 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 GCLMP48507 274 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 APLP1P51693 650 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 SMTNP53814 917 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 KRT76Q01546 638 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 NOGQ13253 232 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 GRB14Q14449 540 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 PLCB4Q15147 1175 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 SKIDA1Q1XH10 827 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 DEFB115Q30KQ5 88 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 EPS8L1Q8TE68 723 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 CD101Q93033 1021 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 TRIM51Q9BSJ1 452 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 PCIF1Q9H4Z3 704 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 TCEAL9Q9UHQ7 104 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 GTF3C4Q9UKN8 822 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 NR2E1Q9Y466 385 aa26.69■■□□□ 1.86
RUNDC3A-201ENST00000225441 NFASCO94856 1347 aa26.68■■□□□ 1.86
RUNDC3A-201ENST00000225441 C5orf60A6NFR6 353 aa26.68■■□□□ 1.86
RUNDC3A-201ENST00000225441 E7EVH7 732 aa26.68■■□□□ 1.86
RUNDC3A-201ENST00000225441 GPC3P51654 580 aa26.68■■□□□ 1.86
RUNDC3A-201ENST00000225441 PMS2P54278 862 aa26.68■■□□□ 1.86
RUNDC3A-201ENST00000225441 KRT39Q6A163 491 aa26.68■■□□□ 1.86
RUNDC3A-201ENST00000225441 SEPT14Q6ZU15 432 aa26.68■■□□□ 1.86
RUNDC3A-201ENST00000225441 ENOSF1Q7L5Y1 443 aa26.68■■□□□ 1.86
RUNDC3A-201ENST00000225441 C12orf50Q8NA57 414 aaPredicted RBP26.68■■□□□ 1.86
RUNDC3A-201ENST00000225441 OR2W6PQ8NHA6 318 aa26.68■■□□□ 1.86
RUNDC3A-201ENST00000225441 P3H4Q92791 437 aa26.68■■□□□ 1.86
RUNDC3A-201ENST00000225441 KIFAP3Q92845 792 aa26.68■■□□□ 1.86
RUNDC3A-201ENST00000225441 PLVAPQ9BX97 442 aa26.68■■□□□ 1.86
RUNDC3A-201ENST00000225441 KIAA1217Q5T5P2 1943 aa26.68■■□□□ 1.86
RUNDC3A-201ENST00000225441 CHRNB2P17787 502 aa26.67■■□□□ 1.86
RUNDC3A-201ENST00000225441 FNTAP49354 379 aa26.67■■□□□ 1.86
RUNDC3A-201ENST00000225441 CRHR2Q13324 411 aa26.67■■□□□ 1.86
RUNDC3A-201ENST00000225441 SLMAPQ14BN4 828 aa26.67■■□□□ 1.86
RUNDC3A-201ENST00000225441 CYFIP1Q7L576 1253 aa26.67■■□□□ 1.86
RUNDC3A-201ENST00000225441 TMEM8AQ9HCN3 771 aa26.67■■□□□ 1.86
RUNDC3A-201ENST00000225441 NOVA2Q9UNW9 492 aaKnown RBP26.67■■□□□ 1.86
RUNDC3A-201ENST00000225441 PCDHA3Q9Y5H8 950 aa26.67■■□□□ 1.86
RUNDC3A-201ENST00000225441 ASB14A6NK59 587 aa26.67■■□□□ 1.86
RUNDC3A-201ENST00000225441 CCNE2O96020 404 aa26.67■■□□□ 1.86
RUNDC3A-201ENST00000225441 USP8P40818 1118 aa26.67■■□□□ 1.86
RUNDC3A-201ENST00000225441 C6orf89Q6UWU4 347 aa26.67■■□□□ 1.86
RUNDC3A-201ENST00000225441 SUGP1Q8IWZ8 645 aaKnown RBP26.67■■□□□ 1.86
RUNDC3A-201ENST00000225441 PRELID2Q8N945 189 aa26.67■■□□□ 1.86
RUNDC3A-201ENST00000225441 SPIRE2Q8WWL2 714 aa26.67■■□□□ 1.86
RUNDC3A-201ENST00000225441 CAPNS2Q96L46 248 aa26.67■■□□□ 1.86
RUNDC3A-201ENST00000225441 STMN4Q9H169 189 aaPredicted RBP26.67■■□□□ 1.86
RUNDC3A-201ENST00000225441 SLC15A5A6NIM6 579 aa26.66■■□□□ 1.86
RUNDC3A-201ENST00000225441 WDR64B1ANS9 1081 aa26.66■■□□□ 1.86
RUNDC3A-201ENST00000225441 COMTP21964 271 aa26.66■■□□□ 1.86
RUNDC3A-201ENST00000225441 DENND2CQ68D51 928 aa26.66■■□□□ 1.86
RUNDC3A-201ENST00000225441 ZNF746Q6NUN9 644 aaPredicted RBP26.66■■□□□ 1.86
RUNDC3A-201ENST00000225441 MAP4K3Q8IVH8 894 aa26.66■■□□□ 1.86
RUNDC3A-201ENST00000225441 MAGOHBQ96A72 148 aaKnown RBP26.66■■□□□ 1.86
RUNDC3A-201ENST00000225441 SENP7Q9BQF6 1050 aa26.66■■□□□ 1.86
RUNDC3A-201ENST00000225441 ERVK-5Q9HDB9 667 aa26.66■■□□□ 1.86
RUNDC3A-201ENST00000225441 ATP8A1Q9Y2Q0 1164 aa26.66■■□□□ 1.86
RUNDC3A-201ENST00000225441 ZNF236Q9UL36 1845 aa26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 ANKRD65E5RJM6 399 aa26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 DKC1O60832 514 aaKnown RBP eCLIP26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 ZC3H11AO75152 810 aaKnown RBP eCLIP26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 CDR2Q01850 454 aa26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 ZDHHC24Q6UX98 284 aa26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 MMS22LQ6ZRQ5 1243 aa26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 SLCO2A1Q92959 643 aa26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 CYFIP2Q96F07 1278 aa26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 FBXL18Q96ME1 805 aa26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 NTPCRQ9BSD7 190 aaKnown RBP26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 CA12O43570 354 aa26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 AOC2O75106 756 aa26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 LIG3P49916 1009 aa26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 MAGOHP61326 146 aaKnown RBP26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 SP2Q02086 613 aa26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 ZNF211Q13398 564 aaPredicted RBP26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 C6orf118Q5T5N4 469 aa26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 EEPD1Q7L9B9 569 aa26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 ZNF467Q7Z7K2 595 aaPredicted RBP26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 NOP9Q86U38 636 aaKnown RBP26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 TAX1BP1Q86VP1 789 aa26.65■■□□□ 1.86
RUNDC3A-201ENST00000225441 MAIP1Q8WWC4 291 aa26.65■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms