RNA–Protein interactions for RNA: ENST00000223641.4

SEC61B-201, Transcript of Sec61 translocon beta subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEC61B, Length 545 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61B-201ENST00000223641 SYN1P17600 705 aa15.2■□□□□ 0.02
SEC61B-201ENST00000223641 TNNI1P19237 187 aa15.2■□□□□ 0.02
SEC61B-201ENST00000223641 PBX1P40424 430 aa15.2■□□□□ 0.02
SEC61B-201ENST00000223641 DUOXA2Q1HG44 320 aa15.2■□□□□ 0.02
SEC61B-201ENST00000223641 ZACNQ401N2 412 aa15.2■□□□□ 0.02
SEC61B-201ENST00000223641 KRT39Q6A163 491 aa15.2■□□□□ 0.02
SEC61B-201ENST00000223641 JADE1Q6IE81 842 aa15.2■□□□□ 0.02
SEC61B-201ENST00000223641 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.2■□□□□ 0.02
SEC61B-201ENST00000223641 SV2AQ7L0J3 742 aa15.2■□□□□ 0.02
SEC61B-201ENST00000223641 OR5B17Q8NGF7 314 aa15.2■□□□□ 0.02
SEC61B-201ENST00000223641 MRFAP1L1Q96HT8 127 aa15.2■□□□□ 0.02
SEC61B-201ENST00000223641 ERGIC2Q96RQ1 377 aa15.2■□□□□ 0.02
SEC61B-201ENST00000223641 APOL6Q9BWW8 343 aa15.2■□□□□ 0.02
SEC61B-201ENST00000223641 RSAD1Q9HA92 442 aa15.2■□□□□ 0.02
SEC61B-201ENST00000223641 PCDH10Q9P2E7 1040 aa15.2■□□□□ 0.02
SEC61B-201ENST00000223641 TDRD15B5MCY1 1934 aaKnown RBP15.19■□□□□ 0.02
SEC61B-201ENST00000223641 FNDC1Q4ZHG4 1894 aaPredicted RBP15.19■□□□□ 0.02
SEC61B-201ENST00000223641 A0A1W2PQC6 194 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 ARL5CA6NH57 179 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 N4BP1O75113 896 aaKnown RBP15.19■□□□□ 0.02
SEC61B-201ENST00000223641 NFICP08651 508 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 ACRP10323 421 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 GCLMP48507 274 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 MXI1P50539 228 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 ZNF75DP51815 510 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 AFF1P51825 1210 aaKnown RBP15.19■□□□□ 0.02
SEC61B-201ENST00000223641 EPHB4P54760 987 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 KCNMA1Q12791 1236 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 NAB2Q15742 525 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 TMEM240Q5SV17 173 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 NPAS4Q8IUM7 802 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 LMO3Q8TAP4 145 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 CXorf38Q8TB03 319 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 RSPH1Q8WYR4 309 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 TOP1MTQ969P6 601 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 FAM212AQ96EL1 285 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 ZFP42Q96MM3 310 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 PPP1R10Q96QC0 940 aaKnown RBP15.19■□□□□ 0.02
SEC61B-201ENST00000223641 GAD1Q99259 594 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 TRIM5Q9C035 493 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 MIOSQ9NXC5 875 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 KLK14Q9P0G3 267 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 PCDHB7Q9Y5E2 793 aa15.19■□□□□ 0.02
SEC61B-201ENST00000223641 FGBP02675 491 aa15.18■□□□□ 0.02
SEC61B-201ENST00000223641 ACTN1P12814 892 aa15.18■□□□□ 0.02
SEC61B-201ENST00000223641 CYP3A5P20815 502 aa15.18■□□□□ 0.02
SEC61B-201ENST00000223641 MLH1P40692 756 aa15.18■□□□□ 0.02
SEC61B-201ENST00000223641 RGS19P49795 217 aa15.18■□□□□ 0.02
SEC61B-201ENST00000223641 WDR5P61964 334 aaKnown RBP15.18■□□□□ 0.02
SEC61B-201ENST00000223641 PLCB2Q00722 1185 aa15.18■□□□□ 0.02
SEC61B-201ENST00000223641 UBXN1Q04323 297 aa15.18■□□□□ 0.02
SEC61B-201ENST00000223641 TMEM132DQ14C87 1099 aa15.18■□□□□ 0.02
SEC61B-201ENST00000223641 EPC2Q52LR7 807 aa15.18■□□□□ 0.02
SEC61B-201ENST00000223641 CLLU1OSQ5K130 101 aa15.18■□□□□ 0.02
SEC61B-201ENST00000223641 TDRD10Q5VZ19 366 aaKnown RBP15.18■□□□□ 0.02
SEC61B-201ENST00000223641 LMBRD2Q68DH5 695 aaPredicted RBP15.18■□□□□ 0.02
SEC61B-201ENST00000223641 DPY19L2P1Q6NXN4 242 aa15.18■□□□□ 0.02
SEC61B-201ENST00000223641 PSRC1Q6PGN9 363 aaPredicted RBP15.18■□□□□ 0.02
SEC61B-201ENST00000223641 ZNF365Q70YC5 407 aa15.18■□□□□ 0.02
SEC61B-201ENST00000223641 TRAPPC11Q7Z392 1133 aa15.18■□□□□ 0.02
SEC61B-201ENST00000223641 CACTINQ8WUQ7 758 aaKnown RBP15.18■□□□□ 0.02
SEC61B-201ENST00000223641 KIF12Q96FN5 646 aa15.18■□□□□ 0.02
SEC61B-201ENST00000223641 ANKRD36BP1Q96IX9 119 aa15.18■□□□□ 0.02
SEC61B-201ENST00000223641 ZMYND8Q9ULU4 1186 aaPredicted RBP15.18■□□□□ 0.02
SEC61B-201ENST00000223641 UBQLN1Q9UMX0 589 aaKnown RBP15.18■□□□□ 0.02
SEC61B-201ENST00000223641 PLAGL2Q9UPG8 496 aa15.18■□□□□ 0.02
SEC61B-201ENST00000223641 SIK3Q9Y2K2 1263 aa15.18■□□□□ 0.02
SEC61B-201ENST00000223641 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.18■□□□□ 0.02
SEC61B-201ENST00000223641 NR2E3Q9Y5X4 410 aa15.18■□□□□ 0.02
SEC61B-201ENST00000223641 COL4A6Q14031 1691 aa15.18■□□□□ 0.02
SEC61B-201ENST00000223641 VNN1O95497 513 aa15.17■□□□□ 0.02
SEC61B-201ENST00000223641 ADCY5O95622 1261 aa15.17■□□□□ 0.02
SEC61B-201ENST00000223641 CST3P01034 146 aaPredicted RBP15.17■□□□□ 0.02
SEC61B-201ENST00000223641 TPM3P06753 285 aa15.17■□□□□ 0.02
SEC61B-201ENST00000223641 THP07101 528 aa15.17■□□□□ 0.02
SEC61B-201ENST00000223641 TFAMQ00059 246 aaKnown RBP15.17■□□□□ 0.02
SEC61B-201ENST00000223641 MYL7Q01449 175 aa15.17■□□□□ 0.02
SEC61B-201ENST00000223641 FKBP15Q5T1M5 1219 aa15.17■□□□□ 0.02
SEC61B-201ENST00000223641 C1orf127Q8N9H9 656 aa15.17■□□□□ 0.02
SEC61B-201ENST00000223641 FBXL13Q8NEE6 735 aa15.17■□□□□ 0.02
SEC61B-201ENST00000223641 TAS1R2Q8TE23 839 aa15.17■□□□□ 0.02
SEC61B-201ENST00000223641 HERVK_113Q902F9 699 aa15.17■□□□□ 0.02
SEC61B-201ENST00000223641 FAM84AQ96KN4 292 aa15.17■□□□□ 0.02
SEC61B-201ENST00000223641 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.17■□□□□ 0.022e-8■□□□□ 8.3
SEC61B-201ENST00000223641 MTMR12Q9C0I1 747 aa15.17■□□□□ 0.02
SEC61B-201ENST00000223641 ANO9A1A5B4 782 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 HOXA2O43364 376 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 XPOTO43592 962 aaKnown RBP15.16■□□□□ 0.02
SEC61B-201ENST00000223641 DGKIO75912 1065 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 TNNC2P02585 160 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 TMEM191BP0C7N4 346 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 FGFR1P11362 822 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 CDC25BP30305 580 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 LRPAP1P30533 357 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 SCNN1GP51170 649 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 SOX4Q06945 474 aaPredicted RBP15.16■□□□□ 0.02
SEC61B-201ENST00000223641 GRIK3Q13003 919 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 EXOC3L4Q17RC7 722 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 GLRA4Q5JXX5 417 aa15.16■□□□□ 0.02
SEC61B-201ENST00000223641 RASIP1Q5U651 963 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms