RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 KIFAP3Q92845 792 aa18.45■□□□□ 0.54
USB1-201ENST00000219281 SLCO2A1Q92959 643 aa18.45■□□□□ 0.54
USB1-201ENST00000219281 IWS1Q96ST2 819 aa18.45■□□□□ 0.54
USB1-201ENST00000219281 PLVAPQ9BX97 442 aa18.45■□□□□ 0.54
USB1-201ENST00000219281 TRIM7Q9C029 511 aa18.45■□□□□ 0.54
USB1-201ENST00000219281 TMEM8AQ9HCN3 771 aa18.45■□□□□ 0.54
USB1-201ENST00000219281 GGT7Q9UJ14 662 aa18.45■□□□□ 0.54
USB1-201ENST00000219281 TBX20Q9UMR3 447 aa18.45■□□□□ 0.54
USB1-201ENST00000219281 TMEM120BA0PK00 339 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 KRT5P13647 590 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 ITIH2P19823 946 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 PTGER2P43116 358 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 ZNF280AP59817 542 aaPredicted RBP18.44■□□□□ 0.54
USB1-201ENST00000219281 CLEC16AQ2KHT3 1053 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 PLA2G4FQ68DD2 849 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 RHBDF2Q6PJF5 856 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 FBXL13Q8NEE6 735 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 SERPINB12Q96P63 405 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 RAB20Q9NX57 234 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 CTNNAL1Q9UBT7 734 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 ASTN2O75129 1339 aaPredicted RBP18.44■□□□□ 0.54
USB1-201ENST00000219281 LOC102724159A0A0B4J2E5 919 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 TCP11X1B4DZS4 312 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 SNX3O60493 162 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 CNGA1P29973 690 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 MRPS9P82933 396 aaKnown RBP18.44■□□□□ 0.54
USB1-201ENST00000219281 DGKZQ13574 1117 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 MTMR1Q13613 665 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 PWP2Q15269 919 aaKnown RBP18.44■□□□□ 0.54
USB1-201ENST00000219281 XKR9Q5GH70 373 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 SNF8Q96H20 258 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 HERPUD2Q9BSE4 406 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 ZNF341Q9BYN7 854 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 MLXIPLQ9NP71 852 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 KCNK9Q9NPC2 374 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 EXOC7Q9UPT5 735 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 COQ4Q9Y3A0 265 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 UBIAD1Q9Y5Z9 338 aa18.44■□□□□ 0.54
USB1-201ENST00000219281 ZNF536O15090 1300 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 LYPLA2O95372 231 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 ATP6V1G2O95670 118 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 ICAM1P05362 532 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 ITGA8P53708 1063 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 E2F5Q15329 346 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 KYNUQ16719 465 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 VSTM1Q6UX27 236 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 TBC1D1Q86TI0 1168 aaPredicted RBP18.43■□□□□ 0.54
USB1-201ENST00000219281 ANKRD42Q8N9B4 389 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 MAGEC3Q8TD91 643 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 CLEC4DQ8WXI8 215 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 PI4K2AQ9BTU6 479 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 DEFB129Q9H1M3 183 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 FGFR1OP2Q9NVK5 253 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 MCM8Q9UJA3 840 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 AGAP1Q9UPQ3 857 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 SCP2P22307 547 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 IVDP26440 423 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 NIPA1Q7RTP0 329 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 TMEM161BQ8NDZ6 487 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 TCP11Q8WWU5 503 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 PWWP2AQ96N64 755 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 CXorf56Q9H5V9 222 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 BAIAP2L1Q9UHR4 511 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.43■□□□□ 0.54
USB1-201ENST00000219281 LOXHD1Q8IVV2 1947 aa18.43■□□□□ 0.54
USB1-201ENST00000219281 TTC4O95801 387 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 VPS41P49754 854 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 PTK6Q13882 451 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 NEDD9Q14511 834 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 SAMD7Q7Z3H4 446 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 CPXCR1Q8N123 301 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 FAM84AQ96KN4 292 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 TIPINQ9BVW5 301 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 PPP1R1BQ9UD71 204 aaPredicted RBP18.42■□□□□ 0.54
USB1-201ENST00000219281 USP15Q9Y4E8 981 aaPredicted RBP18.42■□□□□ 0.54
USB1-201ENST00000219281 MROH7Q68CQ1 1323 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 DENND3A2RUS2 1198 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 UBOX5O94941 541 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 OAS1P00973 400 aaKnown RBP18.42■□□□□ 0.54
USB1-201ENST00000219281 NPTX2P47972 431 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 MCCD1P59942 119 aaPredicted RBP18.42■□□□□ 0.54
USB1-201ENST00000219281 PCNX4Q63HM2 1172 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 LLGL2Q6P1M3 1020 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 SV2AQ7L0J3 742 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 MAP4K3Q8IVH8 894 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 C4orf19Q8IY42 314 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 GIMAP7Q8NHV1 300 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 CPA5Q8WXQ8 436 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 DCLK3Q9C098 648 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 NOD2Q9HC29 1040 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 HOMER2Q9NSB8 354 aa18.42■□□□□ 0.54
USB1-201ENST00000219281 FER1L6Q2WGJ9 1857 aa18.41■□□□□ 0.54
USB1-201ENST00000219281 THAP12O43422 761 aa18.41■□□□□ 0.54
USB1-201ENST00000219281 CLTAP09496 248 aa18.41■□□□□ 0.54
USB1-201ENST00000219281 EIF2AK2P19525 551 aaKnown RBP18.41■□□□□ 0.54
USB1-201ENST00000219281 ATP5DP30049 168 aa18.41■□□□□ 0.54
USB1-201ENST00000219281 ADCY8P40145 1251 aa18.41■□□□□ 0.54
USB1-201ENST00000219281 C2CD6Q53TS8 623 aa18.41■□□□□ 0.54
USB1-201ENST00000219281 DAB2IPQ5VWQ8 1189 aa18.41■□□□□ 0.54
USB1-201ENST00000219281 NUGGCQ68CJ6 796 aa18.41■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms