RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 FOXR2Q6PJQ5 311 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 BTNL9Q6UXG8 535 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 RNF149Q8NC42 400 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 RBBP8NLQ8NC74 664 aaPredicted RBP10.38□□□□□ -0.75
CSTF1-201ENST00000217109 TEX13BQ9BXU2 312 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 PITPNM3Q9BZ71 974 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 OSBPL8Q9BZF1 889 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 RANBP17Q9H2T7 1088 aaKnown RBP10.38□□□□□ -0.75
CSTF1-201ENST00000217109 WRAP73Q9P2S5 460 aaPredicted RBP10.38□□□□□ -0.75
CSTF1-201ENST00000217109 FRMD3A2A2Y4 597 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 PIK3R2O00459 728 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 NEBLO76041 1014 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 TJP3O95049 919 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 GGPS1O95749 300 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 HOXD13P35453 343 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 ACTR2P61160 394 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 NCOA4Q13772 614 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 EMC2Q15006 297 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 PGM5Q15124 567 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 BMT2Q1RMZ1 405 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 SPDYE2Q495Y8 402 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 ENOSF1Q7L5Y1 443 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 PACS2Q86VP3 889 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 KCTD6Q8NC69 237 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 ZNF280CQ8ND82 737 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 ZSWIM2Q8NEG5 633 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 EPS8L1Q8TE68 723 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 PARD3BQ8TEW8 1205 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 ANKRD36BP1Q96IX9 119 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 CFAP57Q96MR6 1250 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 MRIQ9BWK5 157 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 NEUROG2Q9H2A3 272 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 EFCC1Q9HA90 598 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 PRM3Q9NNZ6 103 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 ANKEF1Q9NU02 776 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 HAUS2Q9NVX0 235 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 HOXC10Q9NYD6 342 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 CLEC11AQ9Y240 323 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 AKT3Q9Y243 479 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 SHBGP04278 402 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 ADRB2P07550 413 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 RARAP10276 462 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 KRT10P13645 584 aa10.38□□□□□ -0.75
CSTF1-201ENST00000217109 TRIM6Q9C030 488 aaPredicted RBP10.38□□□□□ -0.75
CSTF1-201ENST00000217109 YDJCA8MPS7 323 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 GZMAP12544 262 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 ARSEP51690 589 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 NOP14P78316 857 aaKnown RBP10.37□□□□□ -0.75
CSTF1-201ENST00000217109 ITGB3BPQ13352 177 aaPredicted RBP10.37□□□□□ -0.75
CSTF1-201ENST00000217109 UGCGQ16739 394 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 ZNF699Q32M78 642 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 PCNX4Q63HM2 1172 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 EPM2AIP1Q7L775 607 aaPredicted RBP10.37□□□□□ -0.75
CSTF1-201ENST00000217109 ZBED8Q8IZ13 594 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 C7orf31Q8N865 590 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 LRRC57Q8N9N7 239 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 PYROXD1Q8WU10 500 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 HES6Q96HZ4 224 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 RBM15Q96T37 977 aaKnown RBP eCLIP10.37□□□□□ -0.751e-6■■■■□ 22.3
CSTF1-201ENST00000217109 ERVK-5Q9HDB9 667 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 FGFR1OP2Q9NVK5 253 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 FBXO40Q9UH90 709 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 SYNJ2BP-COX16A0A087WUM0 186 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 TMEM120BA0PK00 339 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 GJB6O95452 261 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 AGTP01019 485 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 MUTP22033 750 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 CLNS1AP54105 237 aaKnown RBP10.37□□□□□ -0.75
CSTF1-201ENST00000217109 YWHAEP62258 255 aaKnown RBP10.37□□□□□ -0.75
CSTF1-201ENST00000217109 P3H1Q32P28 736 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 ZNF449Q6P9G9 518 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 ANKMY2Q8IV38 441 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 SULF1Q8IWU6 871 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 C4orf19Q8IY42 314 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 LRRC71Q8N4P6 559 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 RSRC1Q96IZ7 334 aaKnown RBP10.37□□□□□ -0.75
CSTF1-201ENST00000217109 MCEEQ96PE7 176 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 RPS6KC1Q96S38 1066 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 TIPINQ9BVW5 301 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 APOL6Q9BWW8 343 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 CYP26B1Q9NR63 512 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 PXMP2Q9NR77 195 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 COX16Q9P0S2 106 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 MAD1L1Q9Y6D9 718 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 TOGARAM1Q9Y4F4 1720 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 STAT5BP51692 787 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 SKOR1P84550 965 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 KCTD2Q14681 263 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 PPP2R5DQ14738 602 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 SMTNL2Q2TAL5 461 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 ZNF568Q3ZCX4 644 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 ANGEL2Q5VTE6 544 aaKnown RBP10.37□□□□□ -0.75
CSTF1-201ENST00000217109 OR6B2Q6IFH4 312 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 LRRC34Q8IZ02 419 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 ZBTB45Q96K62 511 aaPredicted RBP10.37□□□□□ -0.75
CSTF1-201ENST00000217109 HEXIM2Q96MH2 286 aaKnown RBP10.37□□□□□ -0.75
CSTF1-201ENST00000217109 TGS1Q96RS0 853 aaKnown RBP10.37□□□□□ -0.75
CSTF1-201ENST00000217109 SIX2Q9NPC8 291 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 KLC4Q9NSK0 619 aa10.37□□□□□ -0.75
CSTF1-201ENST00000217109 GINM1Q9NU53 330 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms