RNA–Protein interactions for RNA: ENST00000216877.10

PTPRA-201, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,725 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-201ENST00000216877 ZBTB46Q86UZ6 589 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 NBPF15Q8N660 670 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 RFWD2Q8NHY2 731 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 NACA2Q9H009 215 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 STX8Q9UNK0 236 aa15.55■□□□□ 0.08
PTPRA-201ENST00000216877 HOXD12P35452 270 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 SEPT6Q14141 434 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 SGO2Q562F6 1265 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 HSP90AA5PQ58FG0 334 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 RABGAP1LQ5R372 815 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 OTOAQ7RTW8 1153 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 TTC7BQ86TV6 843 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 RASGEF1CQ8N431 466 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 CCDC110Q8TBZ0 833 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 GJA10Q969M2 543 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 RILPQ96NA2 401 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 ANLNQ9NQW6 1124 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 STARD13Q9Y3M8 1113 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 FLT1P17948 1338 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 SPTLC1O15269 473 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 TFPTP0C1Z6 253 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 RPA3P35244 121 aaPredicted RBP15.54■□□□□ 0.08
PTPRA-201ENST00000216877 DMPKQ09013 629 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 PABPC4Q13310 644 aaKnown RBP eCLIP15.54■□□□□ 0.083e-13■■■■■ 32.1
PTPRA-201ENST00000216877 PPP2R5BQ15173 497 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 ZYXQ15942 572 aaKnown RBP15.54■□□□□ 0.08
PTPRA-201ENST00000216877 SMIM5Q71RC9 77 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 SYN2Q92777 582 aaPredicted RBP15.54■□□□□ 0.08
PTPRA-201ENST00000216877 DGCR14Q96DF8 476 aaKnown RBP15.54■□□□□ 0.08
PTPRA-201ENST00000216877 PRR11Q96HE9 360 aaPredicted RBP15.54■□□□□ 0.08
PTPRA-201ENST00000216877 TRIM55Q9BYV6 548 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 THAP2Q9H0W7 228 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 TAS2R1Q9NYW7 299 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 HEY1Q9Y5J3 304 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 UMODL1Q5DID0 1318 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 HEG1Q9ULI3 1381 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 KITP10721 976 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 XRCC5P13010 732 aaKnown RBP15.54■□□□□ 0.08
PTPRA-201ENST00000216877 ATF2P15336 505 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 ITGA8P53708 1063 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 CMPK2Q5EBM0 449 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 ANO5Q75V66 913 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 LRRC6Q86X45 466 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 TREML1Q86YW5 311 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 ARHGEF26Q96DR7 871 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 HES6Q96HZ4 224 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 GCNAQ96QF7 691 aa15.54■□□□□ 0.08
PTPRA-201ENST00000216877 HEMK1Q9Y5R4 338 aaPredicted RBP15.54■□□□□ 0.08
PTPRA-201ENST00000216877 P4HA2O15460 535 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 TTC4O95801 387 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 CETPP11597 493 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 POU5F1Q01860 360 aaKnown RBP15.53■□□□□ 0.08
PTPRA-201ENST00000216877 PLCB3Q01970 1234 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 TROAPQ12815 778 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 RIPOR1Q6ZS17 1223 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 RBM46Q8TBY0 533 aaKnown RBP15.53■□□□□ 0.08
PTPRA-201ENST00000216877 HAPLN3Q96S86 360 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 LIN28AQ9H9Z2 209 aaKnown RBP15.53■□□□□ 0.08
PTPRA-201ENST00000216877 GCNT4Q9P109 453 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.53■□□□□ 0.08
PTPRA-201ENST00000216877 MYOCOSA0A1B0GUC4 107 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 USP17L12C9JPN9 530 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 USP17L21D6R901 530 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 CLIC2O15247 247 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 TBL3Q12788 808 aaKnown RBP15.53■□□□□ 0.08
PTPRA-201ENST00000216877 ACVR2BQ13705 512 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 PPP1R2P3Q6NXS1 205 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 NSMFQ6X4W1 530 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 IRF2BP2Q7Z5L9 587 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 C4orf32Q8N8J7 132 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 RFFLQ8WZ73 363 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 ZMAT2Q96NC0 199 aaKnown RBP15.53■□□□□ 0.08
PTPRA-201ENST00000216877 SHCBP1LQ9BZQ2 653 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 GREM2Q9H772 168 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 SELENONQ9NZV5 590 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 ARFGEF2Q9Y6D5 1785 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 PLS3P13797 630 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 PFKFB3Q16875 520 aaPredicted RBP15.53■□□□□ 0.08
PTPRA-201ENST00000216877 MFSD5Q6N075 450 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 RAPH1Q70E73 1250 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 GIPC3Q8TF64 312 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 BTBD6Q96KE9 485 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 SPZ1Q9BXG8 430 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 MRPL1Q9BYD6 325 aaKnown RBP15.53■□□□□ 0.08
PTPRA-201ENST00000216877 CYP4F11Q9HBI6 524 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 RIC8AQ9NPQ8 531 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 IL1RAPL1Q9NZN1 696 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 FBXO3Q9UK99 471 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 PPM1HQ9ULR3 514 aa15.53■□□□□ 0.08
PTPRA-201ENST00000216877 NIP7Q9Y221 180 aaKnown RBP eCLIP15.53■□□□□ 0.08
PTPRA-201ENST00000216877 CNTNAP5Q8WYK1 1306 aa15.52■□□□□ 0.08
PTPRA-201ENST00000216877 PCDH11YQ9BZA8 1340 aa15.52■□□□□ 0.08
PTPRA-201ENST00000216877 TMEM247A6NEH6 219 aa15.52■□□□□ 0.08
PTPRA-201ENST00000216877 CLDN3O15551 220 aa15.52■□□□□ 0.08
PTPRA-201ENST00000216877 ATMINO43313 823 aaPredicted RBP15.52■□□□□ 0.08
PTPRA-201ENST00000216877 COILP38432 576 aaPredicted RBP15.52■□□□□ 0.08
PTPRA-201ENST00000216877 OXCT1P55809 520 aa15.52■□□□□ 0.08
PTPRA-201ENST00000216877 CYTH1Q15438 398 aa15.52■□□□□ 0.08
PTPRA-201ENST00000216877 PKN2Q16513 984 aaKnown RBP15.52■□□□□ 0.08
PTPRA-201ENST00000216877 SPDYCQ5MJ68 293 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms