RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 HNRNPLLQ8WVV9 542 aaKnown RBP18.7■□□□□ 0.58
VRK1-201ENST00000216639 SELENOOQ9BVL4 669 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 PTPRHQ9HD43 1115 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 TAS2R14Q9NYV8 317 aa18.7■□□□□ 0.58
VRK1-201ENST00000216639 CHRNB2P17787 502 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 HADHBP55084 474 aaKnown RBP18.69■□□□□ 0.58
VRK1-201ENST00000216639 FMO1Q01740 532 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 C2orf54Q08AI8 447 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 NCOA4Q13772 614 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 TCEAL1Q15170 157 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 DUOXA2Q1HG44 320 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 WDR93Q6P2C0 686 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 PNKPQ96T60 521 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 AMFRQ9UKV5 643 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 PCDHB2Q9Y5E7 798 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 MMEP08473 750 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 DNA2P51530 1060 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 CUL2Q13617 745 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 GRIK4Q16099 956 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 OR5B17Q8NGF7 314 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 UBE2Q2Q8WVN8 375 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 ZBTB10Q96DT7 871 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 FAM212AQ96EL1 285 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 ZNF668Q96K58 619 aaPredicted RBP18.69■□□□□ 0.58
VRK1-201ENST00000216639 PCDHB18PQ96TA0 734 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 IFT122Q9HBG6 1241 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 ZNF446Q9NWS9 450 aa18.69■□□□□ 0.58
VRK1-201ENST00000216639 PACSIN2Q9UNF0 486 aaPredicted RBP18.69■□□□□ 0.58
VRK1-201ENST00000216639 RRN3P2A6NIE6 340 aa18.68■□□□□ 0.58
VRK1-201ENST00000216639 KCNK3O14649 394 aa18.68■□□□□ 0.58
VRK1-201ENST00000216639 IL18RAPO95256 599 aa18.68■□□□□ 0.58
VRK1-201ENST00000216639 CLTAP09496 248 aa18.68■□□□□ 0.58
VRK1-201ENST00000216639 HOXC6P09630 235 aa18.68■□□□□ 0.58
VRK1-201ENST00000216639 NOP14P78316 857 aaKnown RBP18.68■□□□□ 0.58
VRK1-201ENST00000216639 KYAT1Q16773 422 aa18.68■□□□□ 0.58
VRK1-201ENST00000216639 THNSL1Q8IYQ7 743 aa18.68■□□□□ 0.58
VRK1-201ENST00000216639 FAM84AQ96KN4 292 aa18.68■□□□□ 0.58
VRK1-201ENST00000216639 OSGEPQ9NPF4 335 aa18.68■□□□□ 0.58
VRK1-201ENST00000216639 OGFRQ9NZT2 677 aa18.68■□□□□ 0.58
VRK1-201ENST00000216639 CTTNBP2NLQ9P2B4 639 aa18.68■□□□□ 0.58
VRK1-201ENST00000216639 A0A087WZ62 844 aa18.67■□□□□ 0.58
VRK1-201ENST00000216639 B4GALT5O43286 388 aa18.67■□□□□ 0.58
VRK1-201ENST00000216639 BUB1BO60566 1050 aaPredicted RBP18.67■□□□□ 0.58
VRK1-201ENST00000216639 ZRANB2O95218 330 aaKnown RBP eCLIP18.67■□□□□ 0.58
VRK1-201ENST00000216639 TNNC2P02585 160 aa18.67■□□□□ 0.58
VRK1-201ENST00000216639 TMEM191BP0C7N4 346 aa18.67■□□□□ 0.58
VRK1-201ENST00000216639 TRPC3Q13507 836 aa18.67■□□□□ 0.58
VRK1-201ENST00000216639 SMYD5Q6GMV2 418 aa18.67■□□□□ 0.58
VRK1-201ENST00000216639 SAPCD2Q86UD0 394 aa18.67■□□□□ 0.58
VRK1-201ENST00000216639 NT5DC3Q86UY8 548 aa18.67■□□□□ 0.58
VRK1-201ENST00000216639 IFNL1Q8IU54 200 aa18.67■□□□□ 0.58
VRK1-201ENST00000216639 RUBCNQ92622 972 aa18.67■□□□□ 0.58
VRK1-201ENST00000216639 ARHGEF26Q96DR7 871 aa18.67■□□□□ 0.58
VRK1-201ENST00000216639 SCLT1Q96NL6 688 aa18.67■□□□□ 0.58
VRK1-201ENST00000216639 FDXACB1Q9BRP7 624 aaPredicted RBP18.67■□□□□ 0.58
VRK1-201ENST00000216639 RPF1Q9H9Y2 349 aaKnown RBP18.67■□□□□ 0.58
VRK1-201ENST00000216639 STXBP5LQ9Y2K9 1186 aa18.67■□□□□ 0.58
VRK1-201ENST00000216639 DCAF8L1A6NGE4 600 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 MCF2P10911 925 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 RGS2P41220 211 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 POU5F1Q01860 360 aaKnown RBP18.66■□□□□ 0.58
VRK1-201ENST00000216639 SGSM1Q2NKQ1 1148 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 SPOPLQ6IQ16 392 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 ACAD10Q6JQN1 1059 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 NLRP7Q8WX94 980 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 DDX1Q92499 740 aaKnown RBP18.66■□□□□ 0.58
VRK1-201ENST00000216639 ELMO3Q96BJ8 720 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 ANKRD36BP1Q96IX9 119 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 ARID3AQ99856 593 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 CDT1Q9H211 546 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 MINDY3Q9H8M7 445 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 ZFYVE28Q9HCC9 887 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 ACP6Q9NPH0 428 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 PCDHB4Q9Y5E5 795 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 ZSWIM8A7E2V4 1837 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 A6NJR5 290 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 DYNC1LI2O43237 492 aaPredicted RBP18.66■□□□□ 0.58
VRK1-201ENST00000216639 B4GALT4O60513 344 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 SLC10A3P09131 477 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 VSNL1P62760 191 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 CDC42EP1Q00587 391 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 MAP9Q49MG5 647 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 GLE1Q53GS7 698 aaKnown RBP18.66■□□□□ 0.58
VRK1-201ENST00000216639 C17orf99Q6UX52 265 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 ZNF410Q86VK4 478 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 SOCS4Q8WXH5 440 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 HES6Q96HZ4 224 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 MS4A14Q96JA4 679 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 MTMR12Q9C0I1 747 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 GOLPH3Q9H4A6 298 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 APOBEC3GQ9HC16 384 aaKnown RBP18.66■□□□□ 0.58
VRK1-201ENST00000216639 ABCB6Q9NP58 842 aa18.66■□□□□ 0.58
VRK1-201ENST00000216639 RNF216Q9NWF9 866 aaPredicted RBP18.66■□□□□ 0.58
VRK1-201ENST00000216639 ASS1P00966 412 aaKnown RBP18.65■□□□□ 0.58
VRK1-201ENST00000216639 VTNP04004 478 aa18.65■□□□□ 0.58
VRK1-201ENST00000216639 ACO1P21399 889 aaKnown RBP18.65■□□□□ 0.58
VRK1-201ENST00000216639 TFAMQ00059 246 aaKnown RBP18.65■□□□□ 0.58
VRK1-201ENST00000216639 SREBF2Q12772 1141 aa18.65■□□□□ 0.58
VRK1-201ENST00000216639 CLEC16AQ2KHT3 1053 aa18.65■□□□□ 0.58
VRK1-201ENST00000216639 EEF1DP3Q658K8 133 aa18.65■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms