RNA–Protein interactions for RNA: ENST00000216099.12

APOBEC3D-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

APPRIS P1 TSL 2 BASIC

Gene APOBEC3D, Length 2,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-201ENST00000216099 PLXNA1Q9UIW2 1896 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 H0YCG3 227 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 DGAT1O75907 488 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 STAU1O95793 577 aaKnown RBP11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 WEE1P30291 646 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 SOX5P35711 763 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 VAMP7P51809 220 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 NPEPPSP55786 919 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 DMP1Q13316 513 aaPredicted RBP11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 PLS1Q14651 629 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 OXLD1Q5BKU9 147 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 TREML2Q5T2D2 321 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 FAM102BQ5T8I3 360 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 ALKBH2Q6NS38 261 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 MAEAQ7L5Y9 396 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 TMEM161BQ8NDZ6 487 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 HSPBP1Q9NZL4 362 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 APEX2Q9UBZ4 518 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 TBX20Q9UMR3 447 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 PCDHGC5Q9Y5F6 944 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 TMEM150BA6NC51 233 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 F8VZ95 297 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 SLC16A4O15374 487 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 MYCLP1P12525 358 aaPredicted RBP11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 EDNRBP24530 442 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 NPTX2P47972 431 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 ALDH5A1P51649 535 aaPredicted RBP11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 CBWD6Q4V339 395 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 ZC3H12AQ5D1E8 599 aaKnown RBP11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 XKR3Q5GH77 459 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 CBWD3Q5JTY5 395 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 CBWD5Q5RIA9 395 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 ERO1BQ86YB8 467 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 MSL3Q8N5Y2 521 aaKnown RBP11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 RNF181Q9P0P0 153 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 SALL4Q9UJQ4 1053 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 FAM50BQ9Y247 325 aa11.43□□□□□ -0.58
APOBEC3D-201ENST00000216099 ADM5C9JUS6 153 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 F2P00734 622 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 TNNT3P45378 269 aaPredicted RBP11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 PRKCEQ02156 737 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 CETN1Q12798 172 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 IFI16Q16666 785 aaKnown RBP11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 WDR93Q6P2C0 686 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 SPATC1Q76KD6 591 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 LMO3Q8TAP4 145 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 RUBCNQ92622 972 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 CEP170P1Q96L14 293 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 FHDC1Q9C0D6 1143 aaPredicted RBP11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 ARFGAP3Q9NP61 516 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 GPRC5CQ9NQ84 441 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 SIRPGQ9P1W8 387 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 BTBD7Q9P203 1132 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 NAGPAQ9UK23 515 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 KCNH4Q9UQ05 1017 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 NUB1Q9Y5A7 615 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 A0A0A6YYK5 440 aaPredicted RBP11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 TARSL2A2RTX5 802 aaKnown RBP11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 VSTM5A8MXK1 200 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 TRIM49P0CI25 452 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 TRIM49CP0CI26 452 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 PNMA6AP0CW24 399 aaPredicted RBP11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 MCM3P25205 808 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 PRKG1Q13976 671 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 KIAA0753Q2KHM9 967 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 EML3Q32P44 896 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 EPC2Q52LR7 807 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 SWSAP1Q6NVH7 229 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 USP50Q70EL3 339 aaPredicted RBP11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 CCDC60Q8IWA6 550 aaPredicted RBP11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 ANKRD35Q8N283 1001 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 MMS19Q96T76 1030 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 CBWD1Q9BRT8 395 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 SYT11Q9BT88 431 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 ATP6V0A4Q9HBG4 840 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 IFT122Q9HBG6 1241 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 NGRNQ9NPE2 291 aaKnown RBP11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 KMT5AQ9NQR1 393 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 CYP26B1Q9NR63 512 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 RNF14Q9UBS8 474 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 ADAMTS1Q9UHI8 967 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 DNAJC12Q9UKB3 198 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 MCM3APO60318 1980 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 ZSWIM8A7E2V4 1837 aa11.42□□□□□ -0.58
APOBEC3D-201ENST00000216099 SYNGAP1Q96PV0 1343 aa11.41□□□□□ -0.58
APOBEC3D-201ENST00000216099 PLXNB2O15031 1838 aa11.41□□□□□ -0.58
APOBEC3D-201ENST00000216099 IGKV6D-21A0A0A0MT36 114 aa11.41□□□□□ -0.58
APOBEC3D-201ENST00000216099 CCDC163A0A0D9SF12 145 aa11.41□□□□□ -0.58
APOBEC3D-201ENST00000216099 SMAPO00193 183 aa11.41□□□□□ -0.58
APOBEC3D-201ENST00000216099 ERLIN1O75477 346 aa11.41□□□□□ -0.58
APOBEC3D-201ENST00000216099 TFRCP02786 760 aaKnown RBP11.41□□□□□ -0.58
APOBEC3D-201ENST00000216099 NF2P35240 595 aa11.41□□□□□ -0.58
APOBEC3D-201ENST00000216099 PPIL2Q13356 520 aa11.41□□□□□ -0.58
APOBEC3D-201ENST00000216099 KIF22Q14807 665 aa11.41□□□□□ -0.58
APOBEC3D-201ENST00000216099 C1orf220Q5T0J3 134 aa11.41□□□□□ -0.58
APOBEC3D-201ENST00000216099 NOA1Q8NC60 698 aaKnown RBP11.41□□□□□ -0.58
APOBEC3D-201ENST00000216099 SLC30A5Q8TAD4 765 aa11.41□□□□□ -0.58
APOBEC3D-201ENST00000216099 OSBPL9Q96SU4 736 aa11.41□□□□□ -0.58
APOBEC3D-201ENST00000216099 GPR88Q9GZN0 384 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms