RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 GLUD2P49448 558 aa18.97■□□□□ 0.63
MRPL28-201ENST00000199706 NDUFA8P51970 172 aa18.97■□□□□ 0.63
MRPL28-201ENST00000199706 OSTNP61366 133 aa18.97■□□□□ 0.63
MRPL28-201ENST00000199706 TFF2Q03403 129 aa18.97■□□□□ 0.63
MRPL28-201ENST00000199706 PPP2R3AQ06190 1150 aa18.97■□□□□ 0.63
MRPL28-201ENST00000199706 ENOX2Q16206 610 aaKnown RBP18.97■□□□□ 0.63
MRPL28-201ENST00000199706 BMT2Q1RMZ1 405 aa18.97■□□□□ 0.63
MRPL28-201ENST00000199706 USP41Q3LFD5 358 aa18.97■□□□□ 0.63
MRPL28-201ENST00000199706 GLRA4Q5JXX5 417 aa18.97■□□□□ 0.63
MRPL28-201ENST00000199706 DCLRE1AQ6PJP8 1040 aa18.97■□□□□ 0.63
MRPL28-201ENST00000199706 FSIP1Q8NA03 581 aa18.97■□□□□ 0.63
MRPL28-201ENST00000199706 PAGE5Q96GU1 130 aa18.97■□□□□ 0.63
MRPL28-201ENST00000199706 CCDC34Q96HJ3 373 aa18.97■□□□□ 0.63
MRPL28-201ENST00000199706 MSLNLQ96KJ4 702 aa18.97■□□□□ 0.63
MRPL28-201ENST00000199706 ZMAT2Q96NC0 199 aaKnown RBP18.97■□□□□ 0.63
MRPL28-201ENST00000199706 RXFP1Q9HBX9 757 aa18.97■□□□□ 0.63
MRPL28-201ENST00000199706 SERTAD1Q9UHV2 236 aa18.97■□□□□ 0.63
MRPL28-201ENST00000199706 AGO2Q9UKV8 859 aaKnown RBP18.97■□□□□ 0.63
MRPL28-201ENST00000199706 FAM50BQ9Y247 325 aa18.97■□□□□ 0.63
MRPL28-201ENST00000199706 CASTOR2A6NHX0 329 aa18.96■□□□□ 0.63
MRPL28-201ENST00000199706 ANKRD63C9JTQ0 380 aa18.96■□□□□ 0.63
MRPL28-201ENST00000199706 XPOTO43592 962 aaKnown RBP18.96■□□□□ 0.63
MRPL28-201ENST00000199706 BMP1P13497 986 aa18.96■□□□□ 0.63
MRPL28-201ENST00000199706 HOXB8P17481 243 aaPredicted RBP18.96■□□□□ 0.63
MRPL28-201ENST00000199706 ADSSP30520 456 aa18.96■□□□□ 0.63
MRPL28-201ENST00000199706 KCNA1Q09470 495 aa18.96■□□□□ 0.63
MRPL28-201ENST00000199706 ZBTB6Q15916 424 aa18.96■□□□□ 0.63
MRPL28-201ENST00000199706 KIAA0319Q5VV43 1072 aa18.96■□□□□ 0.63
MRPL28-201ENST00000199706 PDXDC1Q6P996 788 aa18.96■□□□□ 0.63
MRPL28-201ENST00000199706 ZNF507Q8TCN5 953 aa18.96■□□□□ 0.63
MRPL28-201ENST00000199706 PAAF1Q9BRP4 392 aa18.96■□□□□ 0.63
MRPL28-201ENST00000199706 EMILIN2Q9BXX0 1053 aa18.96■□□□□ 0.63
MRPL28-201ENST00000199706 FGFBP2Q9BYJ0 223 aa18.96■□□□□ 0.63
MRPL28-201ENST00000199706 ASB7Q9H672 318 aa18.96■□□□□ 0.63
MRPL28-201ENST00000199706 RPF1Q9H9Y2 349 aaKnown RBP18.96■□□□□ 0.63
MRPL28-201ENST00000199706 TBC1D7Q9P0N9 293 aa18.96■□□□□ 0.63
MRPL28-201ENST00000199706 C2CD2Q9Y426 696 aa18.96■□□□□ 0.63
MRPL28-201ENST00000199706 VWA8A3KMH1 1905 aa18.96■□□□□ 0.63
MRPL28-201ENST00000199706 TRAPPC3O43617 180 aa18.95■□□□□ 0.62
MRPL28-201ENST00000199706 CLASP2O75122 1294 aaKnown RBP18.95■□□□□ 0.62
MRPL28-201ENST00000199706 TADA2AO75478 443 aa18.95■□□□□ 0.62
MRPL28-201ENST00000199706 LDHAP00338 332 aaKnown RBP18.95■□□□□ 0.62
MRPL28-201ENST00000199706 PAX3P23760 479 aa18.95■□□□□ 0.62
MRPL28-201ENST00000199706 LRPAP1P30533 357 aa18.95■□□□□ 0.62
MRPL28-201ENST00000199706 GTF2F1P35269 517 aaKnown RBP eCLIP18.95■□□□□ 0.625e-13■■■■■ 33.1
MRPL28-201ENST00000199706 SOX4Q06945 474 aaPredicted RBP18.95■□□□□ 0.62
MRPL28-201ENST00000199706 PSMD2Q13200 908 aa18.95■□□□□ 0.62
MRPL28-201ENST00000199706 CUL4BQ13620 913 aa18.95■□□□□ 0.62
MRPL28-201ENST00000199706 KANK3Q6NY19 840 aa18.95■□□□□ 0.62
MRPL28-201ENST00000199706 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.95■□□□□ 0.62
MRPL28-201ENST00000199706 NT5DC4Q86YG4 428 aa18.95■□□□□ 0.62
MRPL28-201ENST00000199706 SYCP3Q8IZU3 236 aa18.95■□□□□ 0.62
MRPL28-201ENST00000199706 SMRP1Q8NCR6 262 aa18.95■□□□□ 0.62
MRPL28-201ENST00000199706 POMGNT1Q8WZA1 660 aa18.95■□□□□ 0.62
MRPL28-201ENST00000199706 CASP10Q92851 521 aa18.95■□□□□ 0.62
MRPL28-201ENST00000199706 GPR62Q9BZJ7 368 aa18.95■□□□□ 0.62
MRPL28-201ENST00000199706 DZANK1Q9NVP4 752 aa18.95■□□□□ 0.62
MRPL28-201ENST00000199706 CLEC1BQ9P126 229 aa18.95■□□□□ 0.62
MRPL28-201ENST00000199706 FNIP2Q9P278 1114 aa18.95■□□□□ 0.62
MRPL28-201ENST00000199706 CGNQ9P2M7 1197 aaKnown RBP18.95■□□□□ 0.62
MRPL28-201ENST00000199706 UBQLN1Q9UMX0 589 aaKnown RBP18.95■□□□□ 0.62
MRPL28-201ENST00000199706 F8W810 466 aa18.94■□□□□ 0.62
MRPL28-201ENST00000199706 LINC01565O15544 149 aa18.94■□□□□ 0.62
MRPL28-201ENST00000199706 KLRC4O43908 158 aa18.94■□□□□ 0.62
MRPL28-201ENST00000199706 CSPG5O95196 566 aa18.94■□□□□ 0.62
MRPL28-201ENST00000199706 TNFSF9P41273 254 aa18.94■□□□□ 0.62
MRPL28-201ENST00000199706 AFMP43652 599 aa18.94■□□□□ 0.62
MRPL28-201ENST00000199706 NDUFV1P49821 464 aa18.94■□□□□ 0.62
MRPL28-201ENST00000199706 CLCNKBP51801 687 aa18.94■□□□□ 0.62
MRPL28-201ENST00000199706 SMAD4Q13485 552 aaKnown RBP18.94■□□□□ 0.62
MRPL28-201ENST00000199706 KRBA2Q6ZNG9 492 aa18.94■□□□□ 0.62
MRPL28-201ENST00000199706 RBM23Q86U06 439 aaKnown RBP18.94■□□□□ 0.62
MRPL28-201ENST00000199706 VN1R2Q8NFZ6 395 aa18.94■□□□□ 0.62
MRPL28-201ENST00000199706 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.94■□□□□ 0.62
MRPL28-201ENST00000199706 TMEM174Q8WUU8 243 aa18.94■□□□□ 0.62
MRPL28-201ENST00000199706 PIK3R5Q8WYR1 880 aa18.94■□□□□ 0.62
MRPL28-201ENST00000199706 IGFLR1Q9H665 355 aa18.94■□□□□ 0.62
MRPL28-201ENST00000199706 GDPD2Q9HCC8 539 aa18.94■□□□□ 0.62
MRPL28-201ENST00000199706 CD207Q9UJ71 328 aa18.94■□□□□ 0.62
MRPL28-201ENST00000199706 HCFC2Q9Y5Z7 792 aa18.94■□□□□ 0.62
MRPL28-201ENST00000199706 GOLGA6L4A6NEF3 574 aa18.93■□□□□ 0.62
MRPL28-201ENST00000199706 GRXCR2A6NFK2 248 aa18.93■□□□□ 0.62
MRPL28-201ENST00000199706 TISP43B9A030 160 aa18.93■□□□□ 0.62
MRPL28-201ENST00000199706 PODXLO00592 558 aa18.93■□□□□ 0.62
MRPL28-201ENST00000199706 PER2O15055 1255 aa18.93■□□□□ 0.62
MRPL28-201ENST00000199706 B3GAT3O94766 335 aa18.93■□□□□ 0.62
MRPL28-201ENST00000199706 ZNF202O95125 648 aa18.93■□□□□ 0.62
MRPL28-201ENST00000199706 IL18RAPO95256 599 aa18.93■□□□□ 0.62
MRPL28-201ENST00000199706 ADH1AP07327 375 aa18.93■□□□□ 0.62
MRPL28-201ENST00000199706 DLX2Q07687 328 aaPredicted RBP18.93■□□□□ 0.62
MRPL28-201ENST00000199706 SEZ6Q53EL9 994 aa18.93■□□□□ 0.62
MRPL28-201ENST00000199706 ZBTB41Q5SVQ8 909 aa18.93■□□□□ 0.62
MRPL28-201ENST00000199706 KIAA1841Q6NSI8 718 aa18.93■□□□□ 0.62
MRPL28-201ENST00000199706 SLC22A17Q8WUG5 538 aa18.93■□□□□ 0.62
MRPL28-201ENST00000199706 SCFD1Q8WVM8 642 aa18.93■□□□□ 0.62
MRPL28-201ENST00000199706 TTPALQ9BTX7 342 aa18.93■□□□□ 0.62
MRPL28-201ENST00000199706 BLZF1Q9H2G9 400 aa18.93■□□□□ 0.62
MRPL28-201ENST00000199706 GOLPH3LQ9H4A5 285 aa18.93■□□□□ 0.62
MRPL28-201ENST00000199706 CHMP5Q9NZZ3 219 aa18.93■□□□□ 0.62
MRPL28-201ENST00000199706 MUC3AQ02505 3323 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms