RNA–Protein interactions for RNA: ENST00000011898.9

TSPAN9-201, Transcript of tetraspanin 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN9, Length 4,323 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-201ENST00000011898 ZNF354CQ86Y25 554 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 SLC35G2Q8TBE7 412 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 ZNF564Q8TBZ8 553 aaPredicted RBP12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.85□□□□□ -0.355e-7■■■■■ 97.6
TSPAN9-201ENST00000011898 RMDN3Q96TC7 470 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 PDP2Q9P2J9 529 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 DDX20Q9UHI6 824 aaKnown RBP12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 CD58P19256 250 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 SNX16P57768 344 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 CXCL9Q07325 125 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 PPP2R5DQ14738 602 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 ANKRD20A4Q4UJ75 823 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 ANKRD20A8PQ5CZ79 823 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 ANKRD20A2Q5SQ80 823 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 ANKRD20A1Q5TYW2 823 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 TMCO5AQ8N6Q1 288 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 USP38Q8NB14 1042 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 ERP27Q96DN0 273 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 NR1H4Q96RI1 486 aaPredicted RBP12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 STK33Q9BYT3 514 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 DDX28Q9NUL7 540 aaKnown RBP12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 TBC1D23Q9NUY8 699 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 ADAM22Q9P0K1 906 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 COMMD10Q9Y6G5 202 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 SOCS7O14512 581 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 MAP2K7O14733 419 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 CYP11B2P19099 503 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 YWHAGP61981 247 aaKnown RBP eCLIP12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 MRPS15P82914 257 aaKnown RBP12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 TFAMQ00059 246 aaKnown RBP12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 ZCWPW2Q504Y3 356 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 ZC2HC1CQ53FD0 456 aaPredicted RBP12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 CDC42EP5Q6NZY7 148 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 DNAJC24Q6P3W2 148 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 DUSP9Q99956 384 aaKnown RBP12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 FGFR1OP2Q9NVK5 253 aa12.85□□□□□ -0.35
TSPAN9-201ENST00000011898 PITPNM2Q9BZ72 1349 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 FAM187AA6NFU0 413 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 NFKBIEO00221 500 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 ZWINTO95229 277 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 KRT1P04264 644 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 GSTA2P09210 222 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 VIL1P09327 827 aaKnown RBP12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 P4HA1P13674 534 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 FMO5P49326 533 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 KRT81Q14533 505 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 CYTH1Q15438 398 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 CATSPER3Q86XQ3 398 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 SYN2Q92777 582 aaPredicted RBP12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 CCDC124Q96CT7 223 aaKnown RBP12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 TRIM56Q9BRZ2 755 aaKnown RBP12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 NUP85Q9BW27 656 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 MRIQ9BWK5 157 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 NXF1Q9UBU9 619 aaKnown RBP12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 NAGPAQ9UK23 515 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 MAGEA13PA6NCF6 341 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 TBX3O15119 743 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 PRLRP16471 622 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 RPS6KA3P51812 740 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 CDK17Q00537 523 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 USP4Q13107 963 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 MMEL1Q495T6 779 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 KLHDC7AQ5VTJ3 777 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 KDM7AQ6ZMT4 941 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 HAUS6Q7Z4H7 955 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 CERS5Q8N5B7 392 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 KIAA0895Q8NCT3 520 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 SLC26A7Q8TE54 656 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 TRIM51Q9BSJ1 452 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 EP400Q96L91 3159 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 GAKO14976 1311 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 DENND3A2RUS2 1198 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 H7C0C1 242 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 INO80B-WBP1J3KQ70 363 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 ATP6V1B1P15313 513 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 RFC5P40937 340 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 ATP5OP48047 213 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 YARSP54577 528 aaKnown RBP12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 SPARCL1Q14515 664 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 EPHA7Q15375 998 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 KBTBD12Q3ZCT8 623 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 KCTD21Q4G0X4 260 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 ANO5Q75V66 913 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 AGGF1Q8N302 714 aaeCLIP12.84□□□□□ -0.355e-7■■■■■ 30.6
TSPAN9-201ENST00000011898 PPP4R1Q8TF05 950 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 ZNF483Q8TF39 744 aaPredicted RBP12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 CDHR1Q96JP9 859 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 ZDHHC15Q96MV8 337 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 AGPAT1Q99943 283 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 INO80BQ9C086 356 aaPredicted RBP12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 MMADHCQ9H3L0 296 aaPredicted RBP12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 KCNQ5Q9NR82 932 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 APEX2Q9UBZ4 518 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 CYTH3O43739 400 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 ZNF394Q53GI3 561 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 KRT39Q6A163 491 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 RNF207Q6ZRF8 634 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 APLFQ8IW19 511 aaPredicted RBP12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 TRIM59Q8IWR1 403 aa12.84□□□□□ -0.35
TSPAN9-201ENST00000011898 NYAP2Q9P242 653 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms