RNA–Protein interactions for RNA: ENSMUST00000196908.4

Pdlim5-209, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,196 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-209ENSMUST00000196908 JundP15066 341 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 ArP19091 899 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Dlg3P70175 849 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Trappc10Q3TLI0 1259 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Spout1Q3UHX9 385 aaKnown RBP9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Usp17laQ61068 526 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Sim2Q61079 657 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Ntan1Q64311 310 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Hdac4Q6NZM9 1076 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Cspg5Q71M36 566 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Bank1Q80VH0 783 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Cep85Q8BMK0 761 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Kcnv2Q8CFS6 562 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Pde5aQ8CG03 865 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 SltmQ8CH25 1031 aaKnown RBP9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Vmn1r213Q8R278 384 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Unc93b1Q8VCW4 598 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Tmem30aQ8VEK0 364 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Tubgcp2Q921G8 905 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Lrp8Q924X6 996 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Apobec3Q99J72 440 aaKnown RBP9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 NptxrQ99J85 493 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 CmasQ99KK2 432 aaKnown RBP9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Iqca1Q9CUL5 857 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Polr2dQ9D7M8 142 aaKnown RBP9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 1700069L16RikQ9D9H5 109 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Lmx1aQ9JKU8 382 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Rai2Q9QVY8 529 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Atp12aQ9Z1W8 1035 aa9.43□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Sptbn4E9PX29 2561 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 AcacbE9Q4Z2 2448 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Igkv17-121A0A0G2JFA8 117 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Cdc27A2A6Q5 825 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Cyp26c1B2RXA7 518 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Tex13cD3YU32 604 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 MthfslL7N466 203 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 MafgO54790 162 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Gas2P11862 314 aaKnown RBP9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 GnaqP21279 359 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Xrcc6P23475 608 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 MsnP26041 577 aaKnown RBP9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Mmp3P28862 477 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Nedd1P33215 660 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 AdprhP54923 362 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Slc30a10Q3UVU3 470 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 PRAG1Q571I4 1179 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Abcf1Q6P542 837 aaKnown RBP9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Casd1Q7TN73 797 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Adamtsl4Q80T21 1036 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 PolrmtQ8BKF1 1207 aaKnown RBP9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Eif2b5Q8CHW4 717 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 FgbQ8K0E8 481 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Tmem60Q8K174 133 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Gtf3c5Q8R2T8 520 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Mlf2Q99KX1 247 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Scrn1Q9CZC8 414 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Calml3Q9D6P8 149 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Psmd10Q9Z2X2 231 aa9.42□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Gm38392E9Q2A2 434 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Gm11239E9Q5Z9 360 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Ccdc121E9Q6D3 323 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Gm11237F2Z3W5 360 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Gm11238F2Z478 360 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Kcna1P16388 495 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 MarcksP26645 309 aaKnown RBP9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Limk1P53668 647 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Anks1aP59672 1150 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Nrp1P97333 923 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 KhsrpQ3U0V1 748 aaKnown RBP9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Gm428Q3UTE2 360 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 4933427I04RikQ3V053 235 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Pex1Q5BL07 1284 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Pwwp2aQ69Z61 730 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Mysm1Q69Z66 819 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Celf6Q7TN33 460 aaKnown RBP9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Otop2Q80SX5 563 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Sbk1Q8QZX0 417 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Vopp1Q8R1C3 172 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 BbxQ8VBW5 907 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 MiosQ8VE19 875 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Vsx1Q91V10 363 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Lzts2Q91YU6 671 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Creld2Q9CYA0 350 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Hhipl2Q9D2G9 717 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Mfsd10Q9D2V8 456 aaKnown RBP9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Ccdc94Q9D6J3 314 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Hip1rQ9JKY5 1068 aa9.41□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Gcn1E9PVA8 2671 aaKnown RBP9.4□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 A0A0U1RNP2 1173 aa9.4□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Nme9A0A1L1SUL6 329 aa9.4□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Dnai2A2AC93 623 aa9.4□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Tbc1d2B1AVH7 922 aa9.4□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Tpm3-rs7D3Z2H9 248 aa9.4□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Gm5624F6ZZG8 207 aa9.4□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Api5O35841 504 aaKnown RBP9.4□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Tnk2O54967 1055 aa9.4□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Trim30aP15533 496 aa9.4□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Fgfr1P16092 822 aa9.4□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 Tnfrsf4P47741 272 aa9.4□□□□□ -0.9
Pdlim5-209ENSMUST00000196908 MafbP54841 323 aa9.4□□□□□ -0.9
Retrieved 100 of 22,080 RNA–protein pairs in 60.3 ms