RNA–Protein interactions for RNA: ENSMUST00000092215.5

Ccdc38-201, Transcript of Coiled-coil domain-containing protein 38, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc38, Length 3,656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc38-201ENSMUST00000092215 Fbxl5Q8C2S5 690 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Glis1Q8K1M4 789 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Sbk1Q8QZX0 417 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 MiosQ8VE19 875 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Arhgef26D3YYY8 869 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Cntnap3E9PY62 1287 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Fbxo43Q8CDI2 640 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Arl8aQ8VEH3 186 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Plagl2Q925T4 496 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Ssr1Q9CY50 286 aaKnown RBP10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Noxred1Q9D3S5 366 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 4931423N10RikQ9D4J9 382 aa10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Prpf40aQ9R1C7 953 aaKnown RBP10.68□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Ank3G5E8K5 1961 aa10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Prdm12A2AJ77 365 aa10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 JchainP01592 159 aa10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Pde6bP23440 856 aa10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 SarsP26638 512 aaKnown RBP10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Nub1P54729 614 aa10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Prdx5P99029 210 aa10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Samd11Q1RNF8 542 aa10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Klra9Q2TJJ8 266 aa10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Upf3bQ3ULL6 472 aa10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Mrps31Q61733 384 aaKnown RBP10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Gucy2gQ6TL19 1100 aa10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Tmem87aQ8BXN9 555 aa10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Taf2Q8C176 1104 aa10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Eif4a3Q91VC3 411 aaKnown RBP10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Itgb3O54890 787 aa10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 GssP51855 474 aa10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Bicdl2Q8CHW5 507 aa10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 PdxkQ8K183 312 aa10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Smg8Q8VE18 991 aa10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Cse1lQ9ERK4 971 aaKnown RBP10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Znf394Q9Z1D9 521 aa10.67□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Zscan4-ps1A0A1C7CYV3 506 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Myo1fP70248 1099 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Spata20Q80YT5 790 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 GopcQ8BH60 463 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Tdrd7Q8K1H1 1086 aaKnown RBP10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Vps36Q91XD6 386 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Kcnu1O54982 1121 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Tnnc1P19123 161 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Mgat1P27808 447 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Inpp5jP59644 1003 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Pcsk1P63239 753 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Agxt2Q3UEG6 513 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Smcr8Q3UMB5 935 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Lrig2Q52KR2 1054 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Six2Q62232 296 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Ctdp1Q7TSG2 960 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 B3glctQ8BHT6 489 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Olfml3Q8BK62 406 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Slc9a9Q8BZ00 644 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Rint1Q8BZ36 792 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Sept8Q8CHH9 429 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Spata4Q8K3V1 295 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Asb7Q91ZU0 318 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Mms19Q9D071 1031 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Trmt10bQ9D075 318 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Trim10Q9WUH5 489 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Myo5aQ99104 1853 aaKnown RBP10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Cyp2b13A6H6J2 491 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Sox8Q04886 464 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Olfr389Q7TRX7 312 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Phf24Q80TL4 400 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Iqcb1Q8BP00 598 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Olfr385Q8VGT1 312 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Tlr3Q99MB1 905 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 GarsQ9CZD3 729 aaKnown RBP10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Fam187aQ9D3R5 417 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 B4galt4Q9JJ04 344 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Znf354bQ9QXT9 601 aa10.66□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Pramef17A2ASJ1 475 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Lrrc73B2RWC4 316 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Abcb5B5X0E4 1255 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Zfr2E9Q5M4 874 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Pcbp1P60335 356 aaKnown RBP10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Meis3P97368 378 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Xkr5Q5GH66 676 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Gas8Q60779 478 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Cyp3a16Q64481 504 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 PolrmtQ8BKF1 1207 aaKnown RBP10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Metap1Q8BP48 386 aaKnown RBP10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Cbwd1Q8VEH6 393 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Fam217aQ9D9W6 419 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Cdc42ep4Q9JM96 349 aaKnown RBP10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 ZxdbA2CE44 873 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Tatdn2B7ZNL9 783 aaKnown RBP10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Plekha5E9Q6H8 1269 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Gm3415J3QMS8 315 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 BhmtO35490 407 aaKnown RBP10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 P01644 108 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 P01645 108 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 P01646 108 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 P01647 108 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Gna15P30678 374 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Smpd1Q04519 627 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 CybbQ61093 570 aa10.65□□□□□ -0.7
Ccdc38-201ENSMUST00000092215 Slc26a2Q62273 739 aa10.65□□□□□ -0.7
Retrieved 100 of 22,080 RNA–protein pairs in 42.7 ms