RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 EloblA6PWE0 161 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Vamp7P70280 220 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Atp11aP98197 1187 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Klra3Q64329 266 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Ccdc117Q6PB51 277 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Trim37Q6PCX9 961 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Q8BGC1 442 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Tcaf1Q8BNE1 924 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Dnm1lQ8K1M6 742 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Rassf3Q99P51 232 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Dnajc18Q9CZJ9 357 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Ankef1Q9D2J7 775 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 PigoQ9JJI6 1093 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Itgb4A2A863 1818 aa17.06■□□□□ 0.32
Ckap4-201ENSMUST00000053871 SfnO70456 248 aaKnown RBP17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Eno1P17182 434 aaKnown RBP17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Casp7P97864 303 aa17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Drp2Q05AA6 957 aa17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 FaxcQ3UMF9 409 aa17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Wdr18Q4VBE8 431 aa17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Klra7Q60654 280 aa17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Gpr150Q8BL07 427 aa17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Ppm1kQ8BXN7 372 aa17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Tph2Q8CGV2 488 aa17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Pou6f1Q07916 301 aa17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Pdlim7Q3TJD7 457 aa17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Hook3Q8BUK6 718 aa17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Aldh5a1Q8BWF0 523 aa17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Thoc1Q8R3N6 657 aaKnown RBP17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Glt1d1A4FUP9 346 aa17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Has3O08650 554 aa17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Rpl7aP12970 266 aaKnown RBP17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Atf2P16951 487 aaKnown RBP17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Wfs1P56695 890 aa17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Pdk2Q9JK42 407 aa17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Lactbl1S4R213 581 aa17.05■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Plcg1Q62077 1302 aa17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Cep85lA0A1W2P884 806 aa17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Nub1P54729 614 aa17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Xlr3bQ6P205 226 aa17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 ClasrpQ8CFC7 668 aa17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Cd300ldQ8VCH2 221 aa17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 DaglbQ91WC9 669 aa17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Rab11fip1Q9D620 645 aa17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Ppil2Q9D787 521 aa17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Ecel1Q9JMI0 775 aa17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Rnf4Q9QZS2 194 aa17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 CtsfQ9R013 462 aa17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Tnni3P48787 211 aa17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Agbl1Q09M05 972 aa17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Aars2Q14CH7 980 aa17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Abl2Q4JIM5 1182 aa17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Tmprss11eQ5S248 423 aa17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Garem2Q6PAJ3 880 aa17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Neto2Q8BNJ6 525 aa17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Ddx20Q9JJY4 825 aaKnown RBP17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Drg2Q9QXB9 364 aaKnown RBP17.04■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Stra6O70491 670 aa17.03■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Tmem145Q8C4U2 746 aa17.03■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Ccdc186Q8C9S4 917 aa17.03■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Ugt3a2Q8JZZ0 523 aa17.03■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Slf1Q8R3P9 1054 aa17.03■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Ppp1r16bQ8VHQ3 568 aa17.03■□□□□ 0.32
Ckap4-201ENSMUST00000053871 BrdtQ91Y44 956 aa17.03■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Abcb11Q9QY30 1321 aa17.03■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Tbc1d16A2ABG4 766 aa17.03■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Tldc2A2ACG1 198 aa17.03■□□□□ 0.32
Ckap4-201ENSMUST00000053871 6030498E09RikB1AX85 169 aa17.03■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Apba1B2RUJ5 842 aa17.03■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Wdr95D3Z7A8 784 aa17.03■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Prom1O54990 867 aa17.03■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Ccdc33Q3ULW6 985 aa17.03■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Ece2Q80Z60 881 aa17.03■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Serpinb13Q8CDC0 389 aa17.03■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Mta2Q9R190 668 aa17.03■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Speer2E9Q9U2 264 aa17.02■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Ttc39dQ0VF76 604 aa17.02■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Srebf2Q3U1N2 1130 aa17.02■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Tdpoz4Q6YCH2 370 aa17.02■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Creb3l2Q8BH52 521 aa17.02■□□□□ 0.32
Ckap4-201ENSMUST00000053871 1700109H08RikQ9D9C0 210 aa17.02■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Iqcf1Q9D9K8 182 aa17.02■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Mmrn2A6H6E2 943 aa17.02■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Gpr161B2RPY5 545 aa17.02■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Oog1E9Q5G7 496 aa17.02■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Prdm15E9Q8T2 1174 aa17.02■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Rad54lP70270 747 aa17.02■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Tcf12Q61286 706 aa17.02■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Birc2Q62210 612 aa17.02■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Ush1gQ80T11 461 aa17.02■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Cep104Q80V31 926 aa17.02■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Uroc1Q8VC12 676 aa17.02■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Olfr390Q8VEZ7 311 aa17.02■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Gps2Q921N8 327 aa17.02■□□□□ 0.32
Ckap4-201ENSMUST00000053871 Mocs3A2BDX3 460 aaKnown RBP17.02■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Per1O35973 1291 aa17.02■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Mmp10O55123 476 aa17.02■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Casp14O89094 257 aa17.02■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Aimp1P31230 310 aaKnown RBP17.02■□□□□ 0.31
Ckap4-201ENSMUST00000053871 Adamts10P58459 1104 aa17.02■□□□□ 0.31
Retrieved 100 of 22,080 RNA–protein pairs in 71.1 ms