RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Vamp7P70280 220 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Kcnma1Q08460 1209 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 AlcamQ61490 583 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Snip1Q8BIZ6 383 aaKnown RBP11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Rd3Q8BRE0 195 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Pgm5Q8BZF8 567 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Fam20aQ8CID3 541 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Taf12Q8VE65 161 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ccdc130Q9D516 385 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Orc3Q9JK30 715 aaKnown RBP11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 JmyQ9QXM1 983 aa11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Celf2Q9Z0H4 508 aaKnown RBP11.53□□□□□ -0.56
Msh3-201ENSMUST00000022220 Bcl9lQ67FY2 1494 aa11.52□□□□□ -0.56
Msh3-201ENSMUST00000022220 Klhl41A2AUC9 606 aa11.52□□□□□ -0.56
Msh3-201ENSMUST00000022220 Mocs3A2BDX3 460 aaKnown RBP11.52□□□□□ -0.56
Msh3-201ENSMUST00000022220 Celf5D3Z4T1 395 aaKnown RBP11.52□□□□□ -0.56
Msh3-201ENSMUST00000022220 Zfp839E9PUU5 921 aa11.52□□□□□ -0.56
Msh3-201ENSMUST00000022220 Eef1bO70251 225 aaKnown RBP11.52□□□□□ -0.56
Msh3-201ENSMUST00000022220 EporP14753 507 aa11.52□□□□□ -0.56
Msh3-201ENSMUST00000022220 Smad1P70340 465 aa11.52□□□□□ -0.56
Msh3-201ENSMUST00000022220 Rcn1Q05186 325 aa11.52□□□□□ -0.56
Msh3-201ENSMUST00000022220 Retreg2Q6NS82 541 aa11.52□□□□□ -0.56
Msh3-201ENSMUST00000022220 PolnQ7TQ07 864 aa11.52□□□□□ -0.56
Msh3-201ENSMUST00000022220 Gcfc2Q8BKT3 769 aa11.52□□□□□ -0.56
Msh3-201ENSMUST00000022220 Clec4gQ8BNX1 294 aa11.52□□□□□ -0.56
Msh3-201ENSMUST00000022220 Scrn2Q8VCA8 425 aa11.52□□□□□ -0.56
Msh3-201ENSMUST00000022220 Csde1Q91W50 798 aaKnown RBP11.52□□□□□ -0.56
Msh3-201ENSMUST00000022220 Castor1Q9CWQ8 331 aa11.52□□□□□ -0.56
Msh3-201ENSMUST00000022220 Ttc33Q9D6K7 262 aa11.52□□□□□ -0.56
Msh3-201ENSMUST00000022220 Uchl3Q9JKB1 230 aa11.52□□□□□ -0.56
Msh3-201ENSMUST00000022220 Atp6v1g2Q9WTT4 118 aa11.52□□□□□ -0.56
Msh3-201ENSMUST00000022220 Oip5A2AQ14 241 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Cops2P61202 443 aaKnown RBP11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 PrkcbP68404 671 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Pou6f1Q07916 301 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Neurl1bQ0MW30 546 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Q80ZQ3 298 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Ankrd45Q810N6 248 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Zdhhc14Q8BQQ1 489 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Polr2bQ8CFI7 1174 aaKnown RBP11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Pkn3Q8K045 878 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Pidd1Q9ERV7 915 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Usp29Q9ES63 869 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Nphs1Q9QZS7 1256 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Mical3Q8CJ19 1993 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 DgkhD3YXJ0 1156 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Tada2bD3Z4Z0 420 aaKnown RBP11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Serpina1aP07758 413 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Serpina1cQ00896 412 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Serpina1dQ00897 413 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Frmd8Q3UFK8 466 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Lrrc14bQ3UJB3 510 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 PapolaQ61183 739 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Tcaf3Q6QR59 914 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 6820408C15RikQ8BJX2 354 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Leg1Q8C6C9 337 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Ccdc15Q8C9M2 810 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Vps37bQ8R0J7 285 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Lrrc8cQ8R502 803 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Setd6Q9CWY3 473 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Lrrc34Q9DAM1 415 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Ddx24Q9ESV0 857 aaKnown RBP11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Rnf103Q9R1W3 683 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 S1pr4Q9Z0L1 386 aa11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 HnrnpcQ9Z204 313 aaKnown RBP11.52□□□□□ -0.57
Msh3-201ENSMUST00000022220 Unc13bQ9Z1N9 1602 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Slfn8B1ARD8 910 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Gpr161B2RPY5 545 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Ndufs6P52503 116 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Ano5Q75UR0 904 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Tmem120aQ8C1E7 343 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Prpf4Q9DAW6 521 aaKnown RBP11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Psmg1Q9JK23 289 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Sgk1Q9WVC6 431 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Mzf1S4R1L6 814 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Bcat1P24288 386 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 PctpP53808 214 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Arpp19P56212 112 aaKnown RBP11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Abi2P62484 446 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Map4k1P70218 827 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Flt3Q00342 1000 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Adamts18Q4VC17 1219 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Arhgap10Q6Y5D8 786 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 VillQ91YD6 859 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Fuca2Q99KR8 461 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Cmtr1Q9DBC3 837 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Abcg8Q9DBM0 673 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 IkbipQ9DBZ1 373 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Fam171a1A2ATK9 892 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Guca2bO09051 106 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Orc4O88708 433 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Adad1Q5SUE7 619 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Srd5a1Q68FF9 255 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Nlrp14Q6B966 993 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Q6PD19 689 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 MafaQ8CF90 359 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 PawrQ925B0 333 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 PdgfdQ925I7 370 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Tlr3Q99MB1 905 aa11.51□□□□□ -0.57
Msh3-201ENSMUST00000022220 Strn3Q9ERG2 796 aa11.51□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms