RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Apol7eQ3UZ24 369 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Wasf2Q8BH43 497 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 RbakQ8BQC8 711 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Fsd1lQ8BYN5 507 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Cwf19l1Q8CI33 537 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Olfr1502Q8VG66 316 aa17.5■□□□□ 0.39
Shh-201ENSMUST00000002708 Bpifb9bA2AJD1 591 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Axin2O88566 840 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 MycnP03966 462 aaKnown RBP17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Zdhhc18Q5Y5T2 380 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Ppp2r5eQ61151 467 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Ntrk3Q6VNS1 825 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Bpifb9aQ80XI7 591 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Siglec10Q80ZE3 688 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Olfml3Q8BK62 406 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Btbd9Q8C726 612 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Stard7Q8R1R3 373 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Ndfip2Q91ZP6 311 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Armc9Q9D2I5 817 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Rnf6Q9DBU5 667 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Olr1Q9EQ09 363 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Gm1661E9Q963 441 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Cyp2b9P12790 491 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Cst8P32766 142 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Lrch1P62046 709 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Oog4Q4G0C7 502 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 FancbQ5XJY6 703 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Sema5aQ62217 1077 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Cpa1Q7TPZ8 419 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Rsad2Q8CBB9 362 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Mill1Q8HWE7 395 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Ftsj3Q9DBE9 838 aaKnown RBP17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 IdeQ9JHR7 1019 aa17.49■□□□□ 0.39
Shh-201ENSMUST00000002708 Gm3182K7N6T8 263 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Tarbp2P97473 365 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 SpoplQ2M2N2 392 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Gm11437Q5QR91 290 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Tgoln2Q62314 363 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Gpr156Q6PCP7 798 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Stkld1Q80YS9 662 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Naa25Q8BWZ3 972 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Rhobtb2Q91V93 728 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Cnot8Q9D8X5 292 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 ErmapQ9JLN5 566 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Smok2bQ9QYZ3 484 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Smok2aQ9QYZ6 504 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Noc2lQ9WV70 747 aaKnown RBP17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Myh9Q8VDD5 1960 aaKnown RBP17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Nptx2O70340 429 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Casp14O89094 257 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Fgfr1P16092 822 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Mybl1P51960 751 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 PklrP53657 574 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Kiaa1328Q6NZK5 612 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Zfp120Q8BZW4 436 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Apol9bQ8C7I4 310 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 HibchQ8QZS1 385 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 ItpkaQ8R071 459 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Apol9aQ8VDU3 310 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Rnf135Q9CWS1 417 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Zfp457L7N1X4 647 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Pde8aO88502 823 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Aff1O88573 1216 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Rrm1P07742 792 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Alkbh1P0CB42 389 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Pde6bP23440 856 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Tfap2bQ61313 459 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Q80WR5 230 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 D630039A03RikQ8K0M7 236 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Spire2Q8K1S6 718 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 HlcsQ920N2 722 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Sv2aQ9JIS5 742 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Cntn6Q9JMB8 1028 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Tll2Q9WVM6 1012 aa17.48■□□□□ 0.39
Shh-201ENSMUST00000002708 Apol8A2VDH7 339 aaKnown RBP17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Skint3A7TZF0 458 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Mt-CybP00158 381 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Eef1dP57776 281 aaKnown RBP17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Taok1Q5F2E8 1001 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 ErfeQ6PGN1 340 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Klhl29Q80T74 875 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Pwp2Q8BU03 919 aaKnown RBP17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Rassf3Q99P51 232 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Q9CYI0 393 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Lrrc34Q9DAM1 415 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Pard6bQ9JK83 371 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Pdcd7Q9WTY1 482 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Mettl1Q9Z120 268 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Scgb2b21A0A087WQA9 112 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Cd70O55237 195 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Mmp20P57748 482 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Pdlim7Q3TJD7 457 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 ChukQ60680 745 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Dync1li2Q6PDL0 492 aaKnown RBP17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 PhkbQ7TSH2 1085 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Ero1aQ8R180 464 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Golga1Q9CW79 758 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 JmyQ9QXM1 983 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Prmt2Q9R144 448 aa17.47■□□□□ 0.39
Shh-201ENSMUST00000002708 Spink5Q148R4 1017 aa17.46■□□□□ 0.39
Retrieved 100 of 22,080 RNA–protein pairs in 63.6 ms