RNA–Protein interactions for RNA: YMR171C

EAR1, Transcript of Specificity factor required for Rsp5p-dependent ubiquitination, yeast

Gene EAR1, Length 1,653 nt, Biotype protein coding, Subcellular localisation Cellular bud, Cytoplasm .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
EAR1	YMR171C	RBS1	Q05672	457 aa	Known RBP	4.09	□□□□□ -1.76
EAR1	YMR171C	YEH1	Q07804	573 aa		4.09	□□□□□ -1.76
EAR1	YMR171C	ZEO1	Q08245	113 aa		4.09	□□□□□ -1.76
EAR1	YMR171C	YER190C-B	P0CX94	160 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	YEL077W-A	P0CX95	160 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	YGR296C-B	P0CX96	160 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	YPL283W-B	P0CX97	160 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	YPR204C-A	P0CX98	160 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	MGR1	P25573	417 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	PMT2	P31382	759 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	SUI1	P32911	108 aa	Known RBP	4.08	□□□□□ -1.76
EAR1	YMR171C	VPS51	P36116	164 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	MRPL37	P36532	105 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	ECM31	P38122	312 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	CHK1	P38147	527 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	MAL32	P38158	584 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	TCM62	P38228	572 aa	Known RBP	4.08	□□□□□ -1.76
EAR1	YMR171C	MED6	P38782	295 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	ANS1	P38832	159 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	PTH1	P38876	190 aa	Known RBP	4.08	□□□□□ -1.76
EAR1	YMR171C	POP1	P41812	875 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	LYS20	P48570	428 aa	Known RBP	4.08	□□□□□ -1.76
EAR1	YMR171C	MAL12	P53341	584 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	NRK1	P53915	240 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	YDR541C	Q03049	344 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	DPB4	Q04603	196 aa	Known RBP	4.08	□□□□□ -1.76
EAR1	YMR171C	DXO1	Q06349	442 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	YPR127W	Q06494	345 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	ANT1	Q06497	328 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	DAP1	Q12091	152 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	TMS1	Q12116	473 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	LEU9	Q12166	604 aa	Known RBP	4.08	□□□□□ -1.76
EAR1	YMR171C	YOS9	Q99220	542 aa		4.08	□□□□□ -1.76
EAR1	YMR171C	TDH2	P00358	332 aa	Known RBP	4.07	□□□□□ -1.76
EAR1	YMR171C	SSA3	P09435	649 aa	Known RBP	4.07	□□□□□ -1.76
EAR1	YMR171C	FUR1	P18562	216 aa	Known RBP	4.07	□□□□□ -1.76
EAR1	YMR171C	PTP1	P25044	335 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	BUB3	P26449	341 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	LDS1	P31379	325 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	SUA5	P32579	426 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	MDL1	P33310	695 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	MIA40	P36046	403 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	PEX32	P38292	413 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	LAG1	P38703	411 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	TRR2	P38816	342 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	GCV3	P39726	170 aa	Predicted RBP	4.07	□□□□□ -1.76
EAR1	YMR171C	RPL10	P41805	221 aa	Known RBP	4.07	□□□□□ -1.76
EAR1	YMR171C	IBA57	P47158	497 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	SRB7	P47822	140 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	SNN1	P48232	102 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	YGL235W	P53071	178 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	FMP48	P53233	369 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	RSM27	P53305	110 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	OGG1	P53397	376 aa	Predicted RBP	4.07	□□□□□ -1.76
EAR1	YMR171C	AQR1	P53943	586 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	GAS2	Q06135	555 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	TAZ1	Q06510	381 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	BRX1	Q08235	291 aa	Known RBP	4.07	□□□□□ -1.76
EAR1	YMR171C	YRM1	Q12340	786 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	YJR112W-A	Q3E743	109 aa		4.07	□□□□□ -1.76
EAR1	YMR171C	TFB5	Q3E7C1	72 aa	Predicted RBP	4.07	□□□□□ -1.76
EAR1	YMR171C	TDH1	P00360	332 aa	Known RBP	4.06	□□□□□ -1.76
EAR1	YMR171C	PHO2	P07269	559 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	PRB1	P09232	635 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	PUT1	P09368	476 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	SCL1	P21243	252 aa	Known RBP	4.06	□□□□□ -1.76
EAR1	YMR171C	ERG24	P32462	438 aa	Known RBP	4.06	□□□□□ -1.76
EAR1	YMR171C	MTC4	P38335	694 aa	Known RBP	4.06	□□□□□ -1.76
EAR1	YMR171C	SGN1	P40561	250 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
EAR1	YMR171C	TAD2	P47058	250 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	MCM22	P47167	239 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	YGL204C	P53089	101 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	CGR1	P53188	120 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	YGR042W	P53227	271 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	ART5	P53244	586 aa	Known RBP	4.06	□□□□□ -1.76
EAR1	YMR171C	RPL15B	P54780	204 aa	Predicted RBP	4.06	□□□□□ -1.76
EAR1	YMR171C	ERV25	P54837	211 aa	Known RBP	4.06	□□□□□ -1.76
EAR1	YMR171C	CTF19	Q02732	369 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	NOC4	Q06512	552 aa	Predicted RBP	4.06	□□□□□ -1.76
EAR1	YMR171C	GRC3	Q07845	632 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	YOR385W	Q08909	290 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	YLR112W	Q12130	139 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	LSO2	Q3E772	92 aa	Known RBP	4.06	□□□□□ -1.76
EAR1	YMR171C	FPR1	P20081	114 aa	Known RBP	4.06	□□□□□ -1.76
EAR1	YMR171C	ZRC1	P20107	442 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	TIM12	P32830	109 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	SRY1	P36007	326 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	YKL071W	P36086	256 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	RRP3	P38712	501 aa	Known RBP	4.06	□□□□□ -1.76
EAR1	YMR171C	BFR1	P38934	470 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
EAR1	YMR171C	ASP1	P38986	381 aa	Predicted RBP	4.06	□□□□□ -1.76
EAR1	YMR171C	SYS1	P41544	203 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	MOG1	P47123	218 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	YGL159W	P53110	370 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	HHO1	P53551	258 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	YNR062C	P53748	327 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	MRPL19	P53875	158 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	LAP3	Q01532	483 aa	Known RBP RIP-Chip data	4.06	□□□□□ -1.76	not detected
EAR1	YMR171C	YML122C	Q03207	126 aa		4.06	□□□□□ -1.76
EAR1	YMR171C	NMA1	Q06178	401 aa	Known RBP	4.06	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms