RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C BRR6P53062 197 aa1.16□□□□□ -2.22
VPS55YJR044C NIF3P53081 288 aa1.16□□□□□ -2.22
VPS55YJR044C YGL159WP53110 370 aa1.16□□□□□ -2.22
VPS55YJR044C ALG13P53178 202 aa1.16□□□□□ -2.22
VPS55YJR044C YGR018CP53211 109 aa1.16□□□□□ -2.22
VPS55YJR044C CAX4P53223 239 aa1.16□□□□□ -2.22
VPS55YJR044C RSM27P53305 110 aa1.16□□□□□ -2.22
VPS55YJR044C RMI1Q02685 241 aa1.16□□□□□ -2.22
VPS55YJR044C CTF19Q02732 369 aa1.16□□□□□ -2.22
VPS55YJR044C SCS7Q03529 384 aa1.16□□□□□ -2.22
VPS55YJR044C YML108WQ03759 105 aa1.16□□□□□ -2.22
VPS55YJR044C YMR244WQ04018 355 aa1.16□□□□□ -2.22
VPS55YJR044C GIM5Q04493 163 aa1.16□□□□□ -2.22
VPS55YJR044C YDR222WQ04925 415 aa1.16□□□□□ -2.22
VPS55YJR044C FAR8Q05040 523 aa1.16□□□□□ -2.22
VPS55YJR044C NNT1Q05874 261 aa1.16□□□□□ -2.22
VPS55YJR044C DXO1Q06349 442 aa1.16□□□□□ -2.22
VPS55YJR044C YET3Q07451 203 aa1.16□□□□□ -2.22
VPS55YJR044C MIM1Q08176 113 aa1.16□□□□□ -2.22
VPS55YJR044C PST1Q12355 444 aa1.16□□□□□ -2.22
VPS55YJR044C YDR157WA0A023PZE8 133 aa1.15□□□□□ -2.23
VPS55YJR044C COX4P04037 155 aa1.15□□□□□ -2.23
VPS55YJR044C BCY1P07278 416 aaKnown RBP1.15□□□□□ -2.23
VPS55YJR044C YAK1P14680 807 aa1.15□□□□□ -2.23
VPS55YJR044C HSP26P15992 214 aaKnown RBP RIP-Chip data1.15□□□□□ -2.23not detected
VPS55YJR044C RPO26P20435 155 aa1.15□□□□□ -2.23
VPS55YJR044C RFA3P26755 122 aaKnown RBP1.15□□□□□ -2.23
VPS55YJR044C SPS18P32572 300 aa1.15□□□□□ -2.23
VPS55YJR044C ZRT3P34240 503 aa1.15□□□□□ -2.23
VPS55YJR044C MBA1P38300 278 aa1.15□□□□□ -2.23
VPS55YJR044C GOS1P38736 223 aa1.15□□□□□ -2.23
VPS55YJR044C YHI9P38765 294 aa1.15□□□□□ -2.23
VPS55YJR044C SRP14P38985 146 aa1.15□□□□□ -2.23
VPS55YJR044C SUR2P38992 349 aa1.15□□□□□ -2.23
VPS55YJR044C RRT13P40042 185 aa1.15□□□□□ -2.23
VPS55YJR044C BMT5P40493 336 aa1.15□□□□□ -2.23
VPS55YJR044C MIC19P43594 170 aa1.15□□□□□ -2.23
VPS55YJR044C IRC18P47056 224 aa1.15□□□□□ -2.23
VPS55YJR044C CPR7P47103 393 aa1.15□□□□□ -2.23
VPS55YJR044C BXI1P48558 297 aa1.15□□□□□ -2.23
VPS55YJR044C MMS2P53152 137 aa1.15□□□□□ -2.23
VPS55YJR044C NOP19P53317 196 aaPredicted RBP1.15□□□□□ -2.23
VPS55YJR044C SSU72P53538 206 aaPredicted RBP1.15□□□□□ -2.23
VPS55YJR044C FMP41P53889 259 aaKnown RBP1.15□□□□□ -2.23
VPS55YJR044C SWS2P53937 143 aa1.15□□□□□ -2.23
VPS55YJR044C DIA1P54005 336 aa1.15□□□□□ -2.23
VPS55YJR044C YMD8Q03697 442 aa1.15□□□□□ -2.23
VPS55YJR044C VHS1Q03785 461 aa1.15□□□□□ -2.23
VPS55YJR044C YLR036CQ07986 203 aa1.15□□□□□ -2.23
VPS55YJR044C SYC1Q08553 188 aaPredicted RBP1.15□□□□□ -2.23
VPS55YJR044C YOR376WQ08900 122 aa1.15□□□□□ -2.23
VPS55YJR044C FDH1Q08911 376 aa1.15□□□□□ -2.23
VPS55YJR044C TRM10Q12400 293 aa1.15□□□□□ -2.23
VPS55YJR044C PSK1P31374 1356 aa1.15□□□□□ -2.23
VPS55YJR044C IKI3Q06706 1349 aaKnown RBP1.15□□□□□ -2.23
VPS55YJR044C YIL177CP40434 1758 aa1.14□□□□□ -2.23
VPS55YJR044C YJL225CP40889 1758 aa1.14□□□□□ -2.23
VPS55YJR044C QCR7P00128 127 aa1.14□□□□□ -2.23
VPS55YJR044C QCR2P07257 368 aa1.14□□□□□ -2.23
VPS55YJR044C RPS19AP07280 144 aaKnown RBP1.14□□□□□ -2.23
VPS55YJR044C RPS19BP07281 144 aaPredicted RBP1.14□□□□□ -2.23
VPS55YJR044C GCN3P14741 305 aa1.14□□□□□ -2.23
VPS55YJR044C PHO80P20052 293 aa1.14□□□□□ -2.23
VPS55YJR044C TRX3P25372 127 aa1.14□□□□□ -2.23
VPS55YJR044C ATG15P25641 520 aa1.14□□□□□ -2.23
VPS55YJR044C TAF14P35189 244 aa1.14□□□□□ -2.23
VPS55YJR044C YPT52P36018 234 aaKnown RBP1.14□□□□□ -2.23
VPS55YJR044C YCR087C-AP37263 153 aa1.14□□□□□ -2.23
VPS55YJR044C SHG1P38337 142 aa1.14□□□□□ -2.23
VPS55YJR044C URA8P38627 578 aaPredicted RBP1.14□□□□□ -2.23
VPS55YJR044C GRE3P38715 327 aaKnown RBP RIP-Chip data1.14□□□□□ -2.23not detected
VPS55YJR044C YHL049CP38722 271 aa1.14□□□□□ -2.23
VPS55YJR044C ASP1P38986 381 aaPredicted RBP1.14□□□□□ -2.23
VPS55YJR044C SEO1P39709 593 aa1.14□□□□□ -2.23
VPS55YJR044C RMD6P39975 231 aa1.14□□□□□ -2.23
VPS55YJR044C GAB1P41733 394 aa1.14□□□□□ -2.23
VPS55YJR044C YJR056CP47115 236 aa1.14□□□□□ -2.23
VPS55YJR044C MCM22P47167 239 aa1.14□□□□□ -2.23
VPS55YJR044C NBP35P52920 328 aa1.14□□□□□ -2.23
VPS55YJR044C MGA1P53050 456 aa1.14□□□□□ -2.23
VPS55YJR044C YGL034CP53186 121 aa1.14□□□□□ -2.23
VPS55YJR044C AAH1P53909 347 aa1.14□□□□□ -2.23
VPS55YJR044C YMR114CQ04471 368 aaKnown RBP1.14□□□□□ -2.23
VPS55YJR044C MRX8Q05473 314 aa1.14□□□□□ -2.23
VPS55YJR044C FUS2Q05670 677 aa1.14□□□□□ -2.23
VPS55YJR044C SEI1Q06058 285 aa1.14□□□□□ -2.23
VPS55YJR044C YLR179CQ06252 201 aaKnown RBP1.14□□□□□ -2.23
VPS55YJR044C COQ10Q08058 207 aa1.14□□□□□ -2.23
VPS55YJR044C YPL264CQ08980 353 aa1.14□□□□□ -2.23
VPS55YJR044C YPR011CQ12251 326 aa1.14□□□□□ -2.23
VPS55YJR044C TPO4Q12256 659 aa1.14□□□□□ -2.23
VPS55YJR044C RAX2Q12465 1220 aa1.14□□□□□ -2.23
VPS55YJR044C MRX4Q12467 430 aa1.14□□□□□ -2.23
VPS55YJR044C TUS1Q06412 1307 aa1.14□□□□□ -2.23
VPS55YJR044C JIP3O13555 125 aa1.13□□□□□ -2.23
VPS55YJR044C CDC28P00546 298 aaKnown RBP1.13□□□□□ -2.23
VPS55YJR044C RPL25P04456 142 aaKnown RBP1.13□□□□□ -2.23
VPS55YJR044C SNA3P14359 133 aa1.13□□□□□ -2.23
VPS55YJR044C DBF2P22204 572 aa1.13□□□□□ -2.23
VPS55YJR044C DPB2P24482 689 aaPredicted RBP1.13□□□□□ -2.23
Retrieved 100 of 5,963 RNA–protein pairs in 24 ms